RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 RPL7L1Q6DKI1 246 aaKnown RBP-0.38□□□□□ -2.47
PCM1-217ENST00000522998 SCIMPQ6UWF3 145 aa-0.38□□□□□ -2.47
PCM1-217ENST00000522998 BAGE3Q86Y29 109 aa-0.38□□□□□ -2.47
PCM1-217ENST00000522998 PRKDCP78527 4128 aaKnown RBP-0.38□□□□□ -2.47
PCM1-217ENST00000522998 M0R2Z0 102 aa-0.39□□□□□ -2.47
PCM1-217ENST00000522998 PIPP12273 146 aaPredicted RBP-0.39□□□□□ -2.47
PCM1-217ENST00000522998 RRAS2P62070 204 aaPredicted RBP-0.39□□□□□ -2.47
PCM1-217ENST00000522998 ALX1Q15699 326 aa-0.39□□□□□ -2.47
PCM1-217ENST00000522998 PSMG3Q9BT73 122 aaPredicted RBP-0.39□□□□□ -2.47
PCM1-217ENST00000522998 PRO0255Q9UI72 69 aa-0.39□□□□□ -2.47
PCM1-217ENST00000522998 NF1P21359 2839 aa-0.39□□□□□ -2.47
PCM1-217ENST00000522998 LRP1BQ9NZR2 4599 aa-0.4□□□□□ -2.47
PCM1-217ENST00000522998 CHD8Q9HCK8 2581 aa-0.4□□□□□ -2.47
PCM1-217ENST00000522998 PXDNQ92626 1479 aa-0.4□□□□□ -2.47
PCM1-217ENST00000522998 URB1O60287 2271 aaKnown RBP-0.4□□□□□ -2.47
PCM1-217ENST00000522998 ATRQ13535 2644 aa-0.4□□□□□ -2.47
PCM1-217ENST00000522998 CEP152O94986 1710 aa-0.4□□□□□ -2.47
PCM1-217ENST00000522998 NWD2Q9ULI1 1742 aa-0.4□□□□□ -2.47
PCM1-217ENST00000522998 M0R3E3 92 aa-0.4□□□□□ -2.47
PCM1-217ENST00000522998 NPFFO15130 113 aa-0.4□□□□□ -2.47
PCM1-217ENST00000522998 NDUFB6O95139 128 aa-0.4□□□□□ -2.47
PCM1-217ENST00000522998 IL5P05113 134 aa-0.4□□□□□ -2.47
PCM1-217ENST00000522998 CCL8P80075 99 aa-0.4□□□□□ -2.47
PCM1-217ENST00000522998 Q5VSD8 79 aa-0.4□□□□□ -2.47
PCM1-217ENST00000522998 FHAD1B1AJZ9 1412 aa-0.4□□□□□ -2.47
PCM1-217ENST00000522998 HERC1Q15751 4861 aa-0.4□□□□□ -2.47
PCM1-217ENST00000522998 PPRC1Q5VV67 1664 aaKnown RBP-0.4□□□□□ -2.47
PCM1-217ENST00000522998 TGP01266 2768 aa-0.4□□□□□ -2.47
PCM1-217ENST00000522998 PRDM2Q13029 1718 aa-0.41□□□□□ -2.47
PCM1-217ENST00000522998 FLNBO75369 2602 aaKnown RBP-0.41□□□□□ -2.47
PCM1-217ENST00000522998 DEFB109BQ30KR1 87 aa-0.41□□□□□ -2.48
PCM1-217ENST00000522998 KRTAP19-8Q3LI54 63 aa-0.41□□□□□ -2.48
PCM1-217ENST00000522998 SPTSSAQ969W0 71 aa-0.41□□□□□ -2.48
PCM1-217ENST00000522998 LINC00312Q9Y6C7 94 aa-0.41□□□□□ -2.48
PCM1-217ENST00000522998 ZNF609O15014 1411 aa-0.41□□□□□ -2.48
PCM1-217ENST00000522998 ACANP16112 2415 aa-0.42□□□□□ -2.48
PCM1-217ENST00000522998 KMT2CQ8NEZ4 4911 aaKnown RBP-0.42□□□□□ -2.48
PCM1-217ENST00000522998 PATJQ8NI35 1801 aa-0.42□□□□□ -2.48
PCM1-217ENST00000522998 K7ERU9 68 aa-0.42□□□□□ -2.48
PCM1-217ENST00000522998 SMIM6P0DI80 62 aa-0.42□□□□□ -2.48
PCM1-217ENST00000522998 GUCA1AP43080 201 aaPredicted RBP-0.42□□□□□ -2.48
PCM1-217ENST00000522998 CCL18P55774 89 aa-0.42□□□□□ -2.48
PCM1-217ENST00000522998 SPAG11BQ08648 103 aa-0.42□□□□□ -2.48
PCM1-217ENST00000522998 CFAP126Q5VTH2 177 aa-0.42□□□□□ -2.48
PCM1-217ENST00000522998 SPTSSBQ8NFR3 76 aa-0.42□□□□□ -2.48
PCM1-217ENST00000522998 SDF2Q99470 211 aa-0.42□□□□□ -2.48
PCM1-217ENST00000522998 STAB2Q8WWQ8 2551 aa-0.42□□□□□ -2.48
PCM1-217ENST00000522998 PCLOQ9Y6V0 5065 aa-0.42□□□□□ -2.48
PCM1-217ENST00000522998 IFT140Q96RY7 1462 aa-0.42□□□□□ -2.48
PCM1-217ENST00000522998 LAMC1P11047 1609 aa-0.42□□□□□ -2.48
PCM1-217ENST00000522998 SPEF2Q9C093 1822 aa-0.43□□□□□ -2.48
PCM1-217ENST00000522998 DOCK1Q14185 1865 aa-0.43□□□□□ -2.48
PCM1-217ENST00000522998 FAM92AA1XBS5 289 aa-0.43□□□□□ -2.48
PCM1-217ENST00000522998 SNCGO76070 127 aa-0.43□□□□□ -2.48
PCM1-217ENST00000522998 SIX6O95475 246 aa-0.43□□□□□ -2.48
PCM1-217ENST00000522998 SCN3BQ9NY72 215 aa-0.43□□□□□ -2.48
PCM1-217ENST00000522998 CREBBPQ92793 2442 aa-0.43□□□□□ -2.48
PCM1-217ENST00000522998 ZNF518AQ6AHZ1 1483 aa-0.43□□□□□ -2.48
PCM1-217ENST00000522998 DOCK2Q92608 1830 aa-0.43□□□□□ -2.48
PCM1-217ENST00000522998 USH2AO75445 5202 aa-0.43□□□□□ -2.48
PCM1-217ENST00000522998 CASKIN1Q8WXD9 1431 aa-0.44□□□□□ -2.48
PCM1-217ENST00000522998 SPAARA0A1B0GVQ0 90 aa-0.44□□□□□ -2.48
PCM1-217ENST00000522998 RPS25P62851 125 aaKnown RBP-0.44□□□□□ -2.48
PCM1-217ENST00000522998 SMIM21Q3B7S5 101 aa-0.44□□□□□ -2.48
PCM1-217ENST00000522998 KRTAP20-2Q3LI61 65 aa-0.44□□□□□ -2.48
PCM1-217ENST00000522998 Q8IZM0 81 aa-0.44□□□□□ -2.48
PCM1-217ENST00000522998 KCNRGQ8N5I3 272 aa-0.44□□□□□ -2.48
PCM1-217ENST00000522998 TSTD1Q8NFU3 115 aa-0.44□□□□□ -2.48
PCM1-217ENST00000522998 LZICQ8WZA0 190 aa-0.44□□□□□ -2.48
PCM1-217ENST00000522998 COPZ2Q9P299 210 aa-0.44□□□□□ -2.48
PCM1-217ENST00000522998 SPCS1Q9Y6A9 102 aa-0.44□□□□□ -2.48
PCM1-217ENST00000522998 EP300Q09472 2414 aaPredicted RBP-0.44□□□□□ -2.48
PCM1-217ENST00000522998 TRAV22A0A0B4J277 110 aa-0.45□□□□□ -2.48
PCM1-217ENST00000522998 SPRR1AP35321 89 aa-0.45□□□□□ -2.48
PCM1-217ENST00000522998 COPZ1P61923 177 aa-0.45□□□□□ -2.48
PCM1-217ENST00000522998 S100A7L2Q5SY68 101 aa-0.45□□□□□ -2.48
PCM1-217ENST00000522998 ANP32BQ92688 251 aaKnown RBP-0.45□□□□□ -2.48
PCM1-217ENST00000522998 TCEAL4Q96EI5 215 aa-0.45□□□□□ -2.48
PCM1-217ENST00000522998 DPH3Q96FX2 82 aa-0.45□□□□□ -2.48
PCM1-217ENST00000522998 TMEM191AQ9H0A3 160 aa-0.45□□□□□ -2.48
PCM1-217ENST00000522998 SVEP1Q4LDE5 3571 aa-0.45□□□□□ -2.48
PCM1-217ENST00000522998 ZNF236Q9UL36 1845 aa-0.45□□□□□ -2.48
PCM1-217ENST00000522998 LRRC37A2A6NM11 1700 aa-0.46□□□□□ -2.48
PCM1-217ENST00000522998 HCG22E2RYF7 251 aa-0.46□□□□□ -2.48
PCM1-217ENST00000522998 BCE1O60756 84 aa-0.46□□□□□ -2.48
PCM1-217ENST00000522998 SPRR2BP35325 72 aa-0.46□□□□□ -2.48
PCM1-217ENST00000522998 SEC11CQ9BY50 192 aa-0.46□□□□□ -2.48
PCM1-217ENST00000522998 R4GMQ9 66 aa-0.46□□□□□ -2.48
PCM1-217ENST00000522998 SETD2Q9BYW2 2564 aaPredicted RBP-0.46□□□□□ -2.48
PCM1-217ENST00000522998 LRP6O75581 1613 aa-0.46□□□□□ -2.48
PCM1-217ENST00000522998 DNAJC13O75165 2243 aa-0.46□□□□□ -2.48
PCM1-217ENST00000522998 MXRA5Q9NR99 2828 aa-0.46□□□□□ -2.48
PCM1-217ENST00000522998 LAMA5O15230 3695 aa-0.46□□□□□ -2.48
PCM1-217ENST00000522998 HERC2O95714 4834 aa-0.47□□□□□ -2.48
PCM1-217ENST00000522998 UNC13AQ9UPW8 1703 aa-0.47□□□□□ -2.48
PCM1-217ENST00000522998 LOC105371267A0A1B0GV96 52 aa-0.47□□□□□ -2.48
PCM1-217ENST00000522998 M0R135 149 aa-0.47□□□□□ -2.48
PCM1-217ENST00000522998 PPP1R17O96001 155 aa-0.47□□□□□ -2.48
PCM1-217ENST00000522998 HAMPP81172 84 aa-0.47□□□□□ -2.48
PCM1-217ENST00000522998 SMCO1Q147U7 214 aa-0.47□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms