RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.17□□□□□ -2.38
SKP1-207ENST00000520417 LSM10Q969L4 123 aaKnown RBP0.17□□□□□ -2.38
SKP1-207ENST00000520417 U3KQA8 63 aa0.17□□□□□ -2.38
SKP1-207ENST00000520417 ZNF142P52746 1687 aaPredicted RBP0.17□□□□□ -2.38
SKP1-207ENST00000520417 ZMYM4Q5VZL5 1548 aa0.17□□□□□ -2.38
SKP1-207ENST00000520417 KDM6BO15054 1643 aa0.16□□□□□ -2.38
SKP1-207ENST00000520417 IFT140Q96RY7 1462 aa0.16□□□□□ -2.38
SKP1-207ENST00000520417 PLXNA1Q9UIW2 1896 aa0.16□□□□□ -2.38
SKP1-207ENST00000520417 PI4KAP42356 2102 aa0.16□□□□□ -2.38
SKP1-207ENST00000520417 ADGRB1O14514 1584 aa0.16□□□□□ -2.38
SKP1-207ENST00000520417 MYH9P35579 1960 aaKnown RBP0.16□□□□□ -2.38
SKP1-207ENST00000520417 KMT2CQ8NEZ4 4911 aaKnown RBP0.16□□□□□ -2.38
SKP1-207ENST00000520417 ASXL3Q9C0F0 2248 aa0.16□□□□□ -2.38
SKP1-207ENST00000520417 G3V318 75 aa0.16□□□□□ -2.38
SKP1-207ENST00000520417 AKAIN1P0CW23 69 aa0.16□□□□□ -2.38
SKP1-207ENST00000520417 HAMPP81172 84 aa0.16□□□□□ -2.38
SKP1-207ENST00000520417 Q5VV11 94 aa0.16□□□□□ -2.38
SKP1-207ENST00000520417 Q8N8P6 123 aa0.16□□□□□ -2.38
SKP1-207ENST00000520417 SMIM4Q8WVI0 70 aa0.16□□□□□ -2.38
SKP1-207ENST00000520417 HRNRQ86YZ3 2850 aaPredicted RBP0.16□□□□□ -2.38
SKP1-207ENST00000520417 NCOR2Q9Y618 2525 aa0.16□□□□□ -2.38
SKP1-207ENST00000520417 SSC5DA1L4H1 1573 aa0.15□□□□□ -2.38
SKP1-207ENST00000520417 LAMC3Q9Y6N6 1575 aa0.15□□□□□ -2.38
SKP1-207ENST00000520417 MAP2P11137 1827 aaKnown RBP0.15□□□□□ -2.38
SKP1-207ENST00000520417 NAIPQ13075 1403 aa0.15□□□□□ -2.39
SKP1-207ENST00000520417 SPTBN2O15020 2390 aa0.15□□□□□ -2.39
SKP1-207ENST00000520417 MIF4GDA9UHW6 222 aaKnown RBP0.15□□□□□ -2.39
SKP1-207ENST00000520417 SNAPC5O75971 98 aa0.15□□□□□ -2.39
SKP1-207ENST00000520417 CCL18P55774 89 aa0.15□□□□□ -2.39
SKP1-207ENST00000520417 CATR1Q13166 79 aa0.15□□□□□ -2.39
SKP1-207ENST00000520417 Q6AWC8 147 aa0.15□□□□□ -2.39
SKP1-207ENST00000520417 PRO0255Q9UI72 69 aa0.15□□□□□ -2.39
SKP1-207ENST00000520417 GRIN2AQ12879 1464 aa0.15□□□□□ -2.39
SKP1-207ENST00000520417 CASKIN1Q8WXD9 1431 aa0.14□□□□□ -2.39
SKP1-207ENST00000520417 LOC100130705A0A1B0GUX0 176 aa0.14□□□□□ -2.39
SKP1-207ENST00000520417 FGF7P21781 194 aa0.14□□□□□ -2.39
SKP1-207ENST00000520417 TMEM170BQ5T4T1 132 aa0.14□□□□□ -2.39
SKP1-207ENST00000520417 RPL13AP3Q6NVV1 102 aa0.14□□□□□ -2.39
SKP1-207ENST00000520417 C1orf54Q8WWF1 131 aa0.14□□□□□ -2.39
SKP1-207ENST00000520417 TSLPQ969D9 159 aa0.14□□□□□ -2.39
SKP1-207ENST00000520417 CYP4F30PQ9H0H9 118 aa0.14□□□□□ -2.39
SKP1-207ENST00000520417 V9GYH0 126 aa0.14□□□□□ -2.39
SKP1-207ENST00000520417 RYR2Q92736 4967 aa0.14□□□□□ -2.39
SKP1-207ENST00000520417 SPEF2Q9C093 1822 aa0.13□□□□□ -2.39
SKP1-207ENST00000520417 COL6A3P12111 3177 aa0.13□□□□□ -2.39
SKP1-207ENST00000520417 ANKHD1Q8IWZ3 2542 aaKnown RBP0.13□□□□□ -2.39
SKP1-207ENST00000520417 TRAV22A0A0B4J277 110 aa0.13□□□□□ -2.39
SKP1-207ENST00000520417 SPAARA0A1B0GVQ0 90 aa0.13□□□□□ -2.39
SKP1-207ENST00000520417 F8VRH5 84 aa0.13□□□□□ -2.39
SKP1-207ENST00000520417 M0R3E3 92 aa0.13□□□□□ -2.39
SKP1-207ENST00000520417 BTG2P78543 158 aa0.13□□□□□ -2.39
SKP1-207ENST00000520417 C8orf59Q8N0T1 100 aaPredicted RBP0.13□□□□□ -2.39
SKP1-207ENST00000520417 SPANXDQ9BXN6 97 aa0.13□□□□□ -2.39
SKP1-207ENST00000520417 LENEPQ9Y5L5 61 aa0.13□□□□□ -2.39
SKP1-207ENST00000520417 SPCS1Q9Y6A9 102 aa0.13□□□□□ -2.39
SKP1-207ENST00000520417 GOLGA3Q08378 1498 aa0.13□□□□□ -2.39
SKP1-207ENST00000520417 LAMB1P07942 1786 aa0.13□□□□□ -2.39
SKP1-207ENST00000520417 PTPRQQ9UMZ3 2332 aa0.13□□□□□ -2.39
SKP1-207ENST00000520417 CFTRP13569 1480 aa0.12□□□□□ -2.39
SKP1-207ENST00000520417 PLCE1Q9P212 2302 aa0.12□□□□□ -2.39
SKP1-207ENST00000520417 ROCK2O75116 1388 aaKnown RBP0.12□□□□□ -2.39
SKP1-207ENST00000520417 TRBV7-3A0A075B6L6 115 aa0.12□□□□□ -2.39
SKP1-207ENST00000520417 BCE1O60756 84 aa0.12□□□□□ -2.39
SKP1-207ENST00000520417 MRPL54Q6P161 138 aaKnown RBP0.12□□□□□ -2.39
SKP1-207ENST00000520417 BAGE2Q86Y30 109 aa0.12□□□□□ -2.39
SKP1-207ENST00000520417 MYOZ3Q8TDC0 251 aa0.12□□□□□ -2.39
SKP1-207ENST00000520417 PP6455Q8WZ26 134 aa0.12□□□□□ -2.39
SKP1-207ENST00000520417 MGST2Q99735 147 aa0.12□□□□□ -2.39
SKP1-207ENST00000520417 CNFNQ9BYD5 112 aa0.12□□□□□ -2.39
SKP1-207ENST00000520417 DYNLRB1Q9NP97 96 aa0.12□□□□□ -2.39
SKP1-207ENST00000520417 MYH8P13535 1937 aa0.12□□□□□ -2.39
SKP1-207ENST00000520417 PPIP5K1Q6PFW1 1433 aa0.12□□□□□ -2.39
SKP1-207ENST00000520417 RYR1P21817 5038 aa0.11□□□□□ -2.39
SKP1-207ENST00000520417 PIEZO2Q9H5I5 2752 aa0.11□□□□□ -2.39
SKP1-207ENST00000520417 EFCAB10A6NFE3 127 aa0.11□□□□□ -2.39
SKP1-207ENST00000520417 UQCR11O14957 56 aa0.11□□□□□ -2.39
SKP1-207ENST00000520417 SSSCA1O60232 199 aa0.11□□□□□ -2.39
SKP1-207ENST00000520417 APOC3P02656 99 aa0.11□□□□□ -2.39
SKP1-207ENST00000520417 SARNPP82979 210 aaKnown RBP0.11□□□□□ -2.39
SKP1-207ENST00000520417 LRP1Q07954 4544 aaKnown RBP0.11□□□□□ -2.39
SKP1-207ENST00000520417 AKAP6Q13023 2319 aa0.11□□□□□ -2.39
SKP1-207ENST00000520417 UBR4Q5T4S7 5183 aa0.11□□□□□ -2.39
SKP1-207ENST00000520417 PKD1L1Q8TDX9 2849 aa0.11□□□□□ -2.39
SKP1-207ENST00000520417 ZNF609O15014 1411 aa0.11□□□□□ -2.39
SKP1-207ENST00000520417 UNC13BO14795 1591 aa0.11□□□□□ -2.39
SKP1-207ENST00000520417 FAM208BQ5VWN6 2430 aa0.11□□□□□ -2.39
SKP1-207ENST00000520417 ARAP2Q8WZ64 1704 aa0.1□□□□□ -2.39
SKP1-207ENST00000520417 RYR3Q15413 4870 aa0.1□□□□□ -2.39
SKP1-207ENST00000520417 KIAA1109Q2LD37 5005 aa0.1□□□□□ -2.39
SKP1-207ENST00000520417 FXYD6-FXYD2A0A087WZ82 144 aa0.1□□□□□ -2.39
SKP1-207ENST00000520417 LOC285095A0A1B0GVY8 99 aa0.1□□□□□ -2.39
SKP1-207ENST00000520417 IGLC7A0M8Q6 106 aa0.1□□□□□ -2.39
SKP1-207ENST00000520417 FAM24AA6NFZ4 105 aa0.1□□□□□ -2.39
SKP1-207ENST00000520417 OOSP1A8MZH6 123 aa0.1□□□□□ -2.39
SKP1-207ENST00000520417 CHKB-CPT1BH3BT56 60 aa0.1□□□□□ -2.39
SKP1-207ENST00000520417 TPPP2P59282 170 aa0.1□□□□□ -2.39
SKP1-207ENST00000520417 COX17Q14061 63 aa0.1□□□□□ -2.39
SKP1-207ENST00000520417 C9orf153Q5TBE3 101 aa0.1□□□□□ -2.39
SKP1-207ENST00000520417 Q6JHZ5 121 aa0.1□□□□□ -2.39
SKP1-207ENST00000520417 C5orf38Q86SI9 138 aa0.1□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms