RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 M0QY20 66 aa6.95□□□□□ -1.3
PDGFRB-203ENST00000517660 MGPP08493 103 aa6.95□□□□□ -1.3
PDGFRB-203ENST00000517660 PNRC1Q12796 327 aaPredicted RBP6.95□□□□□ -1.3
PDGFRB-203ENST00000517660 LYZL1Q6UWQ5 148 aa6.95□□□□□ -1.3
PDGFRB-203ENST00000517660 ENHOQ6UWT2 76 aa6.95□□□□□ -1.3
PDGFRB-203ENST00000517660 NTM-AS1Q6ZSK4 140 aa6.95□□□□□ -1.3
PDGFRB-203ENST00000517660 C15orf54Q8N8G6 183 aa6.95□□□□□ -1.3
PDGFRB-203ENST00000517660 NUDT10Q8NFP7 164 aa6.95□□□□□ -1.3
PDGFRB-203ENST00000517660 NUDT11Q96G61 164 aa6.95□□□□□ -1.3
PDGFRB-203ENST00000517660 SMIM7Q9BQ49 75 aa6.95□□□□□ -1.3
PDGFRB-203ENST00000517660 FAM30AQ9NZY2 134 aa6.95□□□□□ -1.3
PDGFRB-203ENST00000517660 CRPP02741 224 aa6.94□□□□□ -1.3
PDGFRB-203ENST00000517660 ANGP03950 147 aaKnown RBP6.94□□□□□ -1.3
PDGFRB-203ENST00000517660 TRGC1P0CF51 173 aa6.94□□□□□ -1.3
PDGFRB-203ENST00000517660 MPV17L2Q567V2 206 aa6.94□□□□□ -1.3
PDGFRB-203ENST00000517660 SUMO4Q6EEV6 95 aa6.94□□□□□ -1.3
PDGFRB-203ENST00000517660 C1orf43Q9BWL3 253 aa6.94□□□□□ -1.3
PDGFRB-203ENST00000517660 NAT8Q9UHE5 227 aa6.94□□□□□ -1.3
PDGFRB-203ENST00000517660 TRBV25-1A0A075B6N4 114 aa6.93□□□□□ -1.3
PDGFRB-203ENST00000517660 IGHV1-24A0A0C4DH33 117 aa6.93□□□□□ -1.3
PDGFRB-203ENST00000517660 NTF3P20783 257 aa6.93□□□□□ -1.3
PDGFRB-203ENST00000517660 IQCJQ1A5X6 159 aa6.93□□□□□ -1.3
PDGFRB-203ENST00000517660 C14orf177Q52M58 125 aa6.93□□□□□ -1.3
PDGFRB-203ENST00000517660 RASL11AQ6T310 242 aa6.93□□□□□ -1.3
PDGFRB-203ENST00000517660 OCC1Q8TAD7 63 aa6.93□□□□□ -1.3
PDGFRB-203ENST00000517660 DPH3P1Q9H4G8 78 aa6.93□□□□□ -1.3
PDGFRB-203ENST00000517660 LOC105371267A0A1B0GV96 52 aa6.92□□□□□ -1.3
PDGFRB-203ENST00000517660 MT-ND4LP03901 98 aa6.92□□□□□ -1.3
PDGFRB-203ENST00000517660 CTRLP40313 264 aa6.92□□□□□ -1.3
PDGFRB-203ENST00000517660 RBX1P62877 108 aa6.92□□□□□ -1.3
PDGFRB-203ENST00000517660 GAGE6Q13070 117 aa6.92□□□□□ -1.3
PDGFRB-203ENST00000517660 ADIRFQ15847 76 aa6.92□□□□□ -1.3
PDGFRB-203ENST00000517660 MIAQ16674 131 aa6.92□□□□□ -1.3
PDGFRB-203ENST00000517660 TMEM241Q24JQ0 296 aa6.92□□□□□ -1.3
PDGFRB-203ENST00000517660 Q6ZSA8 131 aa6.92□□□□□ -1.3
PDGFRB-203ENST00000517660 ISOC2Q96AB3 205 aa6.92□□□□□ -1.3
PDGFRB-203ENST00000517660 RPP21Q9H633 154 aaKnown RBP6.92□□□□□ -1.3
PDGFRB-203ENST00000517660 NIT2Q9NQR4 276 aa6.92□□□□□ -1.3
PDGFRB-203ENST00000517660 TNXBP22105 4242 aa6.91□□□□□ -1.3
PDGFRB-203ENST00000517660 COLCA2A8K830 154 aa6.91□□□□□ -1.3
PDGFRB-203ENST00000517660 K7EN84 100 aa6.91□□□□□ -1.3
PDGFRB-203ENST00000517660 RAB5BP61020 215 aa6.91□□□□□ -1.3
PDGFRB-203ENST00000517660 TWIST1Q15672 202 aa6.91□□□□□ -1.3
PDGFRB-203ENST00000517660 CNFNQ9BYD5 112 aa6.91□□□□□ -1.3
PDGFRB-203ENST00000517660 RNASE7Q9H1E1 156 aaKnown RBP6.91□□□□□ -1.3
PDGFRB-203ENST00000517660 PRR34Q9NV39 138 aa6.91□□□□□ -1.3
PDGFRB-203ENST00000517660 C1orf196B1AJZ1 125 aa6.9□□□□□ -1.3
PDGFRB-203ENST00000517660 RAB5AP20339 215 aa6.9□□□□□ -1.3
PDGFRB-203ENST00000517660 LINC01620Q4KN68 170 aa6.9□□□□□ -1.3
PDGFRB-203ENST00000517660 LINC00269Q8N2A0 174 aa6.9□□□□□ -1.3
PDGFRB-203ENST00000517660 TMEM243Q9BU79 118 aa6.9□□□□□ -1.3
PDGFRB-203ENST00000517660 KRTAP9-2Q9BYQ4 174 aa6.9□□□□□ -1.3
PDGFRB-203ENST00000517660 CTDSP1Q9GZU7 261 aa6.9□□□□□ -1.3
PDGFRB-203ENST00000517660 GATCO43716 136 aaKnown RBP6.89□□□□□ -1.31
PDGFRB-203ENST00000517660 RPL23P62829 140 aaKnown RBP6.89□□□□□ -1.31
PDGFRB-203ENST00000517660 FAM231DQ6ZW35 169 aa6.89□□□□□ -1.31
PDGFRB-203ENST00000517660 PGLYRP4Q96LB8 373 aa6.89□□□□□ -1.31
PDGFRB-203ENST00000517660 A0A1B0GUV1 79 aa6.88□□□□□ -1.31
PDGFRB-203ENST00000517660 A8MWL6 223 aa6.88□□□□□ -1.31
PDGFRB-203ENST00000517660 USP17L23D6RBM5 183 aa6.88□□□□□ -1.31
PDGFRB-203ENST00000517660 HLA-DQA1P01909 254 aa6.88□□□□□ -1.31
PDGFRB-203ENST00000517660 REG3AQ06141 175 aa6.88□□□□□ -1.31
PDGFRB-203ENST00000517660 COTL1Q14019 142 aa6.88□□□□□ -1.31
PDGFRB-203ENST00000517660 KRTAP26-1Q6PEX3 210 aa6.88□□□□□ -1.31
PDGFRB-203ENST00000517660 SMIM15Q7Z3B0 74 aa6.88□□□□□ -1.31
PDGFRB-203ENST00000517660 GATD1Q8NB37 220 aa6.88□□□□□ -1.31
PDGFRB-203ENST00000517660 C20orf203Q8NBC4 194 aa6.88□□□□□ -1.31
PDGFRB-203ENST00000517660 GTSF1Q8WW33 167 aa6.88□□□□□ -1.31
PDGFRB-203ENST00000517660 TRAV8-4A0A0B4J246 113 aa6.87□□□□□ -1.31
PDGFRB-203ENST00000517660 PLA2G1BP04054 148 aaKnown RBP6.87□□□□□ -1.31
PDGFRB-203ENST00000517660 S100PP25815 95 aa6.87□□□□□ -1.31
PDGFRB-203ENST00000517660 AMTP48728 403 aa6.87□□□□□ -1.31
PDGFRB-203ENST00000517660 FOXA3P55318 350 aaPredicted RBP6.87□□□□□ -1.31
PDGFRB-203ENST00000517660 DGAT2L7PQ6IED9 249 aa6.87□□□□□ -1.31
PDGFRB-203ENST00000517660 CLPSL2Q6UWE3 100 aa6.87□□□□□ -1.31
PDGFRB-203ENST00000517660 ANAPC16Q96DE5 110 aa6.87□□□□□ -1.31
PDGFRB-203ENST00000517660 CHAC1Q9BUX1 264 aa6.87□□□□□ -1.31
PDGFRB-203ENST00000517660 TMEM242Q9NWH2 141 aa6.87□□□□□ -1.31
PDGFRB-203ENST00000517660 IGLV4-60A0A075B6I1 120 aa6.86□□□□□ -1.31
PDGFRB-203ENST00000517660 TGIF2-C20orf24A0A0A6YYL0 155 aa6.86□□□□□ -1.31
PDGFRB-203ENST00000517660 TRAV26-2A0A0B4J265 109 aa6.86□□□□□ -1.31
PDGFRB-203ENST00000517660 UBE2L6O14933 153 aa6.86□□□□□ -1.31
PDGFRB-203ENST00000517660 PPP1R2P9O14990 202 aa6.86□□□□□ -1.31
PDGFRB-203ENST00000517660 PRSS1P07477 247 aa6.86□□□□□ -1.31
PDGFRB-203ENST00000517660 RPS10P46783 165 aaKnown RBP6.86□□□□□ -1.31
PDGFRB-203ENST00000517660 CT83Q5H943 113 aa6.86□□□□□ -1.31
PDGFRB-203ENST00000517660 SCXQ7RTU7 201 aa6.86□□□□□ -1.31
PDGFRB-203ENST00000517660 LINC00528Q8N1L1 170 aa6.86□□□□□ -1.31
PDGFRB-203ENST00000517660 DEFB104AQ8WTQ1 72 aa6.86□□□□□ -1.31
PDGFRB-203ENST00000517660 YPEL4Q96NS1 127 aa6.86□□□□□ -1.31
PDGFRB-203ENST00000517660 KRTAP9-6A0A140TA67 174 aa6.85□□□□□ -1.31
PDGFRB-203ENST00000517660 S100A6P06703 90 aa6.85□□□□□ -1.31
PDGFRB-203ENST00000517660 LINC01551Q86U37 167 aa6.85□□□□□ -1.31
PDGFRB-203ENST00000517660 BORCS7Q96B45 105 aa6.85□□□□□ -1.31
PDGFRB-203ENST00000517660 IGLV10-54A0A075B6I4 117 aa6.84□□□□□ -1.31
PDGFRB-203ENST00000517660 NCR2O95944 276 aa6.84□□□□□ -1.31
PDGFRB-203ENST00000517660 CIRBP-AS1Q8TBR5 109 aa6.84□□□□□ -1.31
PDGFRB-203ENST00000517660 TSKUQ8WUA8 353 aa6.84□□□□□ -1.31
PDGFRB-203ENST00000517660 RPL39LQ96EH5 51 aaKnown RBP6.84□□□□□ -1.31
PDGFRB-203ENST00000517660 GFRA4Q9GZZ7 299 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms