RNA–Protein interactions for RNA: ENST00000517352.1

TNFRSF11B-202, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 1 (best)

Gene TNFRSF11B, Length 1,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-202ENST00000517352 PLA2G2DQ9UNK4 145 aa4.87□□□□□ -1.63
TNFRSF11B-202ENST00000517352 ARL2-SNX15V9GYD0 113 aa4.87□□□□□ -1.63
TNFRSF11B-202ENST00000517352 TRBV7-3A0A075B6L6 115 aa4.86□□□□□ -1.63
TNFRSF11B-202ENST00000517352 A0A1W2PRE2 83 aa4.86□□□□□ -1.63
TNFRSF11B-202ENST00000517352 PEX7O00628 323 aa4.86□□□□□ -1.63
TNFRSF11B-202ENST00000517352 OXTP01178 125 aa4.86□□□□□ -1.63
TNFRSF11B-202ENST00000517352 RPL37AP61513 92 aaKnown RBP4.86□□□□□ -1.63
TNFRSF11B-202ENST00000517352 PNRC1Q12796 327 aaPredicted RBP4.86□□□□□ -1.63
TNFRSF11B-202ENST00000517352 WFDC2Q14508 124 aa4.86□□□□□ -1.63
TNFRSF11B-202ENST00000517352 NIT1Q86X76 327 aa4.86□□□□□ -1.63
TNFRSF11B-202ENST00000517352 C15orf54Q8N8G6 183 aa4.86□□□□□ -1.63
TNFRSF11B-202ENST00000517352 ZC2HC1AQ96GY0 325 aa4.86□□□□□ -1.63
TNFRSF11B-202ENST00000517352 LINC00479Q96M42 142 aa4.86□□□□□ -1.63
TNFRSF11B-202ENST00000517352 CHCHD7Q9BUK0 85 aa4.86□□□□□ -1.63
TNFRSF11B-202ENST00000517352 ZFP30Q9Y2G7 519 aa4.86□□□□□ -1.63
TNFRSF11B-202ENST00000517352 IGKV3D-20A0A0C4DH25 116 aa4.85□□□□□ -1.63
TNFRSF11B-202ENST00000517352 TRBV10-1A0A0K0K1A3 114 aa4.85□□□□□ -1.63
TNFRSF11B-202ENST00000517352 SPANXN1Q5VSR9 72 aa4.85□□□□□ -1.63
TNFRSF11B-202ENST00000517352 MRPL52Q86TS9 123 aaKnown RBP4.85□□□□□ -1.63
TNFRSF11B-202ENST00000517352 FMC1Q96HJ9 113 aa4.85□□□□□ -1.63
TNFRSF11B-202ENST00000517352 C2orf88Q9BSF0 95 aa4.85□□□□□ -1.63
TNFRSF11B-202ENST00000517352 JPT2Q9H910 190 aa4.85□□□□□ -1.63
TNFRSF11B-202ENST00000517352 ALG5Q9Y673 324 aa4.85□□□□□ -1.63
TNFRSF11B-202ENST00000517352 FXYD6-FXYD2A0A087WZ82 144 aa4.84□□□□□ -1.63
TNFRSF11B-202ENST00000517352 A0A0D9SG52 128 aa4.84□□□□□ -1.63
TNFRSF11B-202ENST00000517352 CTXND1A0A1B0GTU2 59 aa4.84□□□□□ -1.63
TNFRSF11B-202ENST00000517352 KRBOX1C9JBD0 128 aa4.84□□□□□ -1.63
TNFRSF11B-202ENST00000517352 SH2D1AO60880 128 aa4.84□□□□□ -1.63
TNFRSF11B-202ENST00000517352 PTTG1O95997 202 aa4.84□□□□□ -1.63
TNFRSF11B-202ENST00000517352 AKR1C3P42330 323 aa4.84□□□□□ -1.63
TNFRSF11B-202ENST00000517352 TMEM97Q5BJF2 176 aa4.84□□□□□ -1.63
TNFRSF11B-202ENST00000517352 Q6ZSA8 131 aa4.84□□□□□ -1.63
TNFRSF11B-202ENST00000517352 COX8CQ7Z4L0 72 aa4.84□□□□□ -1.63
TNFRSF11B-202ENST00000517352 CIRBP-AS1Q8TBR5 109 aa4.84□□□□□ -1.63
TNFRSF11B-202ENST00000517352 TCEAL7Q9BRU2 100 aa4.84□□□□□ -1.63
TNFRSF11B-202ENST00000517352 ZNF471Q9BX82 626 aaPredicted RBP4.84□□□□□ -1.63
TNFRSF11B-202ENST00000517352 TRBV6-8A0A0A6YYG3 113 aa4.83□□□□□ -1.64
TNFRSF11B-202ENST00000517352 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.83□□□□□ -1.64
TNFRSF11B-202ENST00000517352 IGLV2-11P01706 119 aa4.83□□□□□ -1.64
TNFRSF11B-202ENST00000517352 MIAQ16674 131 aa4.83□□□□□ -1.64
TNFRSF11B-202ENST00000517352 Q86TA4 180 aa4.83□□□□□ -1.64
TNFRSF11B-202ENST00000517352 AQP10Q96PS8 301 aa4.83□□□□□ -1.64
TNFRSF11B-202ENST00000517352 DNAH8Q96JB1 4490 aa4.82□□□□□ -1.64
TNFRSF11B-202ENST00000517352 TRBV25-1A0A075B6N4 114 aa4.82□□□□□ -1.64
TNFRSF11B-202ENST00000517352 MAP1LC3B2A6NCE7 125 aa4.82□□□□□ -1.64
TNFRSF11B-202ENST00000517352 UBE2L6O14933 153 aa4.82□□□□□ -1.64
TNFRSF11B-202ENST00000517352 SMIM6P0DI80 62 aa4.82□□□□□ -1.64
TNFRSF11B-202ENST00000517352 RPL7L1Q6DKI1 246 aaKnown RBP4.82□□□□□ -1.64
TNFRSF11B-202ENST00000517352 CLPSL2Q6UWE3 100 aa4.82□□□□□ -1.64
TNFRSF11B-202ENST00000517352 DERL1Q9BUN8 251 aa4.82□□□□□ -1.64
TNFRSF11B-202ENST00000517352 MAP1LC3BQ9GZQ8 125 aa4.82□□□□□ -1.64
TNFRSF11B-202ENST00000517352 A0A1B0GVG6 124 aa4.81□□□□□ -1.64
TNFRSF11B-202ENST00000517352 hDV102S1A0JD36 115 aa4.81□□□□□ -1.64
TNFRSF11B-202ENST00000517352 H7C1H1 209 aa4.81□□□□□ -1.64
TNFRSF11B-202ENST00000517352 MGPP08493 103 aa4.81□□□□□ -1.64
TNFRSF11B-202ENST00000517352 UBE2D3P61077 147 aa4.81□□□□□ -1.64
TNFRSF11B-202ENST00000517352 UBE2D2P62837 147 aa4.81□□□□□ -1.64
TNFRSF11B-202ENST00000517352 RPL32P62910 135 aaKnown RBP4.81□□□□□ -1.64
TNFRSF11B-202ENST00000517352 GAGE6Q13070 117 aa4.81□□□□□ -1.64
TNFRSF11B-202ENST00000517352 MPV17L2Q567V2 206 aa4.81□□□□□ -1.64
TNFRSF11B-202ENST00000517352 LINC00269Q8N2A0 174 aa4.81□□□□□ -1.64
TNFRSF11B-202ENST00000517352 DNAJC30Q96LL9 226 aa4.81□□□□□ -1.64
TNFRSF11B-202ENST00000517352 KRTAP9-9Q9BYP9 154 aa4.81□□□□□ -1.64
TNFRSF11B-202ENST00000517352 KRTAP9-4Q9BYQ2 154 aa4.81□□□□□ -1.64
TNFRSF11B-202ENST00000517352 BIN3Q9NQY0 253 aa4.81□□□□□ -1.64
TNFRSF11B-202ENST00000517352 Q9UF83 564 aa4.81□□□□□ -1.64
TNFRSF11B-202ENST00000517352 IGHV1-24A0A0C4DH33 117 aa4.8□□□□□ -1.64
TNFRSF11B-202ENST00000517352 MUC21A0A0G2JKD1 596 aa4.8□□□□□ -1.64
TNFRSF11B-202ENST00000517352 MUC21A0A140T8X8 626 aa4.8□□□□□ -1.64
TNFRSF11B-202ENST00000517352 A0A1B0GV50 99 aa4.8□□□□□ -1.64
TNFRSF11B-202ENST00000517352 LINC00694P0DN24 101 aa4.8□□□□□ -1.64
TNFRSF11B-202ENST00000517352 SULT1A2P50226 295 aa4.8□□□□□ -1.64
TNFRSF11B-202ENST00000517352 CRIP1P50238 77 aa4.8□□□□□ -1.64
TNFRSF11B-202ENST00000517352 RAB5CP51148 216 aa4.8□□□□□ -1.64
TNFRSF11B-202ENST00000517352 IFITM3Q01628 133 aa4.8□□□□□ -1.64
TNFRSF11B-202ENST00000517352 DNLZQ5SXM8 178 aa4.8□□□□□ -1.64
TNFRSF11B-202ENST00000517352 BAGE2Q86Y30 109 aa4.8□□□□□ -1.64
TNFRSF11B-202ENST00000517352 SFT2D1Q8WV19 159 aa4.8□□□□□ -1.64
TNFRSF11B-202ENST00000517352 BTF3L4Q96K17 158 aa4.8□□□□□ -1.64
TNFRSF11B-202ENST00000517352 AP1S3Q96PC3 154 aa4.8□□□□□ -1.64
TNFRSF11B-202ENST00000517352 UBR4Q5T4S7 5183 aa4.8□□□□□ -1.64
TNFRSF11B-202ENST00000517352 IGLV10-54A0A075B6I4 117 aa4.79□□□□□ -1.64
TNFRSF11B-202ENST00000517352 IGHV3-64A0A075B6Q5 118 aa4.79□□□□□ -1.64
TNFRSF11B-202ENST00000517352 TINCRA0A1B0GVN0 87 aa4.79□□□□□ -1.64
TNFRSF11B-202ENST00000517352 FAM231BA6NCW3 169 aa4.79□□□□□ -1.64
TNFRSF11B-202ENST00000517352 GIPP09681 153 aaPredicted RBP4.79□□□□□ -1.64
TNFRSF11B-202ENST00000517352 UFSP1Q6NVU6 142 aa4.79□□□□□ -1.64
TNFRSF11B-202ENST00000517352 ATRAIDQ6UW56 229 aa4.79□□□□□ -1.64
TNFRSF11B-202ENST00000517352 ENHOQ6UWT2 76 aa4.79□□□□□ -1.64
TNFRSF11B-202ENST00000517352 OR10G8Q8NGN5 311 aa4.79□□□□□ -1.64
TNFRSF11B-202ENST00000517352 C7orf33Q8WU49 177 aa4.79□□□□□ -1.64
TNFRSF11B-202ENST00000517352 VPS25Q9BRG1 176 aa4.79□□□□□ -1.64
TNFRSF11B-202ENST00000517352 SPANXA1Q9NS26 97 aa4.79□□□□□ -1.64
TNFRSF11B-202ENST00000517352 TRAV8-4A0A0B4J246 113 aa4.78□□□□□ -1.64
TNFRSF11B-202ENST00000517352 IGKV3OR2-268A0A0C4DH90 116 aa4.78□□□□□ -1.64
TNFRSF11B-202ENST00000517352 TRBV6-1A0A0K0K1D8 114 aa4.78□□□□□ -1.64
TNFRSF11B-202ENST00000517352 LTAP01374 205 aa4.78□□□□□ -1.64
TNFRSF11B-202ENST00000517352 IFNA1P01562 189 aa4.78□□□□□ -1.64
TNFRSF11B-202ENST00000517352 P01737 135 aa4.78□□□□□ -1.64
TNFRSF11B-202ENST00000517352 S100A8P05109 93 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms