RNA–Protein interactions for RNA: ENST00000515629.5

SLC38A9-223, Transcript of solute carrier family 38 member 9, human

TSL 2 BASIC

Gene SLC38A9, Length 2,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC38A9-223	ENST00000515629	CFC1B	P0CG36	223 aa		2.92	□□□□□ -1.94
SLC38A9-223	ENST00000515629	RPL27A	P46776	148 aa	Known RBP	2.92	□□□□□ -1.94
SLC38A9-223	ENST00000515629	RPL38	P63173	70 aa	Known RBP	2.92	□□□□□ -1.94
SLC38A9-223	ENST00000515629	CHCHD1	Q96BP2	118 aa	Known RBP	2.92	□□□□□ -1.94
SLC38A9-223	ENST00000515629	IGHV3-43	A0A0B4J1X8	118 aa		2.92	□□□□□ -1.94
SLC38A9-223	ENST00000515629	MUC21	A0A140T8X8	626 aa		2.92	□□□□□ -1.94
SLC38A9-223	ENST00000515629	IGHV3-23	P01764	117 aa		2.92	□□□□□ -1.94
SLC38A9-223	ENST00000515629	IGKC	P01834	107 aa		2.92	□□□□□ -1.94
SLC38A9-223	ENST00000515629	NPPC	P23582	126 aa		2.92	□□□□□ -1.94
SLC38A9-223	ENST00000515629	NANOS3	P60323	173 aa	Known RBP	2.92	□□□□□ -1.94
SLC38A9-223	ENST00000515629		Q6P435	159 aa		2.92	□□□□□ -1.94
SLC38A9-223	ENST00000515629	PATE2	Q6UY27	113 aa		2.92	□□□□□ -1.94
SLC38A9-223	ENST00000515629	ZFP2	Q6ZN57	461 aa		2.92	□□□□□ -1.94
SLC38A9-223	ENST00000515629	NABP2	Q9BQ15	211 aa		2.92	□□□□□ -1.94
SLC38A9-223	ENST00000515629	WNK1	Q9H4A3	2382 aa		2.92	□□□□□ -1.94
SLC38A9-223	ENST00000515629	NOTCH1	P46531	2555 aa		2.91	□□□□□ -1.94
SLC38A9-223	ENST00000515629	IGHV1-18	A0A0C4DH31	117 aa		2.91	□□□□□ -1.94
SLC38A9-223	ENST00000515629	LOC107984156	A0A0G2JMH3	177 aa		2.91	□□□□□ -1.94
SLC38A9-223	ENST00000515629	UBE2L5P	A0A1B0GUS4	154 aa		2.91	□□□□□ -1.94
SLC38A9-223	ENST00000515629	C3orf84	H3BNL1	204 aa		2.91	□□□□□ -1.94
SLC38A9-223	ENST00000515629	ZNF688	P0C7X2	276 aa		2.91	□□□□□ -1.94
SLC38A9-223	ENST00000515629	UBE2L3	P68036	154 aa	Known RBP	2.91	□□□□□ -1.94
SLC38A9-223	ENST00000515629	MRPS36	P82909	103 aa	Known RBP	2.91	□□□□□ -1.94
SLC38A9-223	ENST00000515629	RNASE13	Q5GAN3	156 aa	Known RBP	2.91	□□□□□ -1.94
SLC38A9-223	ENST00000515629	IGFL4	Q6B9Z1	124 aa		2.91	□□□□□ -1.94
SLC38A9-223	ENST00000515629		Q6ZQT7	251 aa		2.91	□□□□□ -1.94
SLC38A9-223	ENST00000515629	SBSPON	Q8IVN8	264 aa		2.91	□□□□□ -1.94
SLC38A9-223	ENST00000515629	ARL17A	Q8IVW1	177 aa		2.91	□□□□□ -1.94
SLC38A9-223	ENST00000515629	AMN1	Q8IY45	258 aa		2.91	□□□□□ -1.94
SLC38A9-223	ENST00000515629	ZFAND2A	Q8N6M9	145 aa		2.91	□□□□□ -1.94
SLC38A9-223	ENST00000515629	FAM216B	Q8N7L0	139 aa		2.91	□□□□□ -1.94
SLC38A9-223	ENST00000515629	SPTSSA	Q969W0	71 aa		2.91	□□□□□ -1.94
SLC38A9-223	ENST00000515629	C8orf49	Q96NF6	230 aa		2.91	□□□□□ -1.94
SLC38A9-223	ENST00000515629	TAS2R4	Q9NYW5	299 aa		2.91	□□□□□ -1.94
SLC38A9-223	ENST00000515629	IGHV3-49	A0A0A0MS15	119 aa		2.91	□□□□□ -1.94
SLC38A9-223	ENST00000515629	LYNX1	G3V0Z9	82 aa		2.91	□□□□□ -1.94
SLC38A9-223	ENST00000515629	YPEL1	O60688	119 aa		2.91	□□□□□ -1.94
SLC38A9-223	ENST00000515629	LYNX1	P0DP58	116 aa		2.91	□□□□□ -1.94
SLC38A9-223	ENST00000515629	SIGLECL1	Q8N7X8	197 aa		2.91	□□□□□ -1.94
SLC38A9-223	ENST00000515629	ZNF563	Q8TA94	476 aa		2.91	□□□□□ -1.94
SLC38A9-223	ENST00000515629		A0A1B0GW54	56 aa		2.9	□□□□□ -1.94
SLC38A9-223	ENST00000515629	NAP1L6	A6NFF2	107 aa		2.9	□□□□□ -1.94
SLC38A9-223	ENST00000515629	PMS2P5	A8MQ11	134 aa		2.9	□□□□□ -1.94
SLC38A9-223	ENST00000515629	PPDPFL	Q8WWR9	84 aa		2.9	□□□□□ -1.94
SLC38A9-223	ENST00000515629	IMMP2L	Q96T52	175 aa		2.9	□□□□□ -1.94
SLC38A9-223	ENST00000515629	PRKDC	P78527	4128 aa	Known RBP	2.9	□□□□□ -1.95
SLC38A9-223	ENST00000515629	IGLV3-9	A0A075B6K5	115 aa		2.9	□□□□□ -1.95
SLC38A9-223	ENST00000515629	SRRM5	B3KS81	715 aa		2.9	□□□□□ -1.95
SLC38A9-223	ENST00000515629		B4DSR2	109 aa		2.9	□□□□□ -1.95
SLC38A9-223	ENST00000515629	IGLV1-44	P01699	117 aa		2.9	□□□□□ -1.95
SLC38A9-223	ENST00000515629	TRGV3	P03979	118 aa		2.9	□□□□□ -1.95
SLC38A9-223	ENST00000515629	SUPT4H1	P63272	117 aa	Known RBP	2.9	□□□□□ -1.95
SLC38A9-223	ENST00000515629	CLECL1	Q8IZS7	167 aa		2.9	□□□□□ -1.95
SLC38A9-223	ENST00000515629	C11orf1	Q9H5F2	150 aa		2.9	□□□□□ -1.95
SLC38A9-223	ENST00000515629	CYTL1	Q9NRR1	136 aa		2.9	□□□□□ -1.95
SLC38A9-223	ENST00000515629	NDUFB11	Q9NX14	153 aa		2.9	□□□□□ -1.95
SLC38A9-223	ENST00000515629	ARHGAP32	A7KAX9	2087 aa		2.89	□□□□□ -1.95
SLC38A9-223	ENST00000515629	NUPR1	O60356	82 aa		2.89	□□□□□ -1.95
SLC38A9-223	ENST00000515629	IGKV3-15	P01624	115 aa		2.89	□□□□□ -1.95
SLC38A9-223	ENST00000515629	APCS	P02743	223 aa		2.89	□□□□□ -1.95
SLC38A9-223	ENST00000515629	FXYD7	P58549	80 aa		2.89	□□□□□ -1.95
SLC38A9-223	ENST00000515629	NMS	Q5H8A3	153 aa		2.89	□□□□□ -1.95
SLC38A9-223	ENST00000515629	ZNF627	Q7L945	461 aa		2.89	□□□□□ -1.95
SLC38A9-223	ENST00000515629	OR8B3	Q8NGG8	313 aa		2.89	□□□□□ -1.95
SLC38A9-223	ENST00000515629	SLC50A1	Q9BRV3	221 aa		2.89	□□□□□ -1.95
SLC38A9-223	ENST00000515629	DYNLRB1	Q9NP97	96 aa		2.89	□□□□□ -1.95
SLC38A9-223	ENST00000515629	RABAC1	Q9UI14	185 aa		2.89	□□□□□ -1.95
SLC38A9-223	ENST00000515629	ZNF222	Q9UK12	451 aa		2.89	□□□□□ -1.95
SLC38A9-223	ENST00000515629	IGHV7-4-1	A0A0J9YVY3	117 aa		2.89	□□□□□ -1.95
SLC38A9-223	ENST00000515629		K7ERS5	55 aa		2.89	□□□□□ -1.95
SLC38A9-223	ENST00000515629	MSMB	P08118	114 aa		2.89	□□□□□ -1.95
SLC38A9-223	ENST00000515629	PRB4	P10163	310 aa	Predicted RBP	2.89	□□□□□ -1.95
SLC38A9-223	ENST00000515629	ATP11AUN	Q6ZP68	121 aa		2.89	□□□□□ -1.95
SLC38A9-223	ENST00000515629	RETNLB	Q9BQ08	111 aa		2.89	□□□□□ -1.95
SLC38A9-223	ENST00000515629		A0A087X002	238 aa		2.88	□□□□□ -1.95
SLC38A9-223	ENST00000515629	C19orf71	A6NCJ1	209 aa		2.88	□□□□□ -1.95
SLC38A9-223	ENST00000515629		A8MWP4	228 aa		2.88	□□□□□ -1.95
SLC38A9-223	ENST00000515629	IGKV1D-33	P01593	117 aa		2.88	□□□□□ -1.95
SLC38A9-223	ENST00000515629	IGKV1-33	P01594	117 aa		2.88	□□□□□ -1.95
SLC38A9-223	ENST00000515629	COL8A2	P25067	703 aa		2.88	□□□□□ -1.95
SLC38A9-223	ENST00000515629	ZNF322	Q6U7Q0	402 aa	Predicted RBP	2.88	□□□□□ -1.95
SLC38A9-223	ENST00000515629	ZCCHC23	Q6ZST2	131 aa		2.88	□□□□□ -1.95
SLC38A9-223	ENST00000515629	CAMK2N1	Q7Z7J9	78 aa		2.88	□□□□□ -1.95
SLC38A9-223	ENST00000515629	LINC01006	Q8NI28	216 aa		2.88	□□□□□ -1.95
SLC38A9-223	ENST00000515629	AQP3	Q92482	292 aa		2.88	□□□□□ -1.95
SLC38A9-223	ENST00000515629	OR8B2	Q96RD0	313 aa		2.88	□□□□□ -1.95
SLC38A9-223	ENST00000515629	IGHV3-21	A0A0B4J1V1	117 aa		2.88	□□□□□ -1.95
SLC38A9-223	ENST00000515629	IGHV1-24	A0A0C4DH33	117 aa		2.88	□□□□□ -1.95
SLC38A9-223	ENST00000515629	IGHV3-66	A0A0C4DH42	116 aa		2.88	□□□□□ -1.95
SLC38A9-223	ENST00000515629	TRBV7-7	A0A0K0K1E9	115 aa		2.88	□□□□□ -1.95
SLC38A9-223	ENST00000515629		A6NN06	94 aa		2.88	□□□□□ -1.95
SLC38A9-223	ENST00000515629	HMGN4	O00479	90 aa		2.88	□□□□□ -1.95
SLC38A9-223	ENST00000515629	CPSF4	O95639	269 aa	Known RBP	2.88	□□□□□ -1.95
SLC38A9-223	ENST00000515629	GNB1	P62873	340 aa		2.88	□□□□□ -1.95
SLC38A9-223	ENST00000515629	ZNF660	Q6AZW8	331 aa	Predicted RBP	2.88	□□□□□ -1.95
SLC38A9-223	ENST00000515629		Q8N8P6	123 aa		2.88	□□□□□ -1.95
SLC38A9-223	ENST00000515629	LINC00474	Q9P2X8	69 aa		2.88	□□□□□ -1.95
SLC38A9-223	ENST00000515629	VWF	P04275	2813 aa		2.88	□□□□□ -1.95
SLC38A9-223	ENST00000515629	SLC25A20	O43772	301 aa		2.87	□□□□□ -1.95
SLC38A9-223	ENST00000515629	DEFA4	P12838	97 aa		2.87	□□□□□ -1.95

Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms