RNA–Protein interactions for RNA: ENST00000514934.1

SGCA-211, Transcript of sarcoglycan alpha, humanhuman

TSL 4

Gene SGCA, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-211ENST00000514934 TPPP3Q9BW30 176 aa9.53□□□□□ -0.88
SGCA-211ENST00000514934 C9JQL5 133 aa9.52□□□□□ -0.89
SGCA-211ENST00000514934 SMIM17P0DL12 118 aa9.52□□□□□ -0.89
SGCA-211ENST00000514934 TMEM97Q5BJF2 176 aa9.52□□□□□ -0.89
SGCA-211ENST00000514934 C20orf203Q8NBC4 194 aa9.52□□□□□ -0.89
SGCA-211ENST00000514934 CHCHD5Q9BSY4 110 aa9.52□□□□□ -0.89
SGCA-211ENST00000514934 GFRA4Q9GZZ7 299 aa9.52□□□□□ -0.89
SGCA-211ENST00000514934 RPP21Q9H633 154 aaKnown RBP9.52□□□□□ -0.89
SGCA-211ENST00000514934 TMEM262E9PQX1 116 aa9.51□□□□□ -0.89
SGCA-211ENST00000514934 MGPP08493 103 aa9.51□□□□□ -0.89
SGCA-211ENST00000514934 GAGE6Q13070 117 aa9.51□□□□□ -0.89
SGCA-211ENST00000514934 RASL11AQ6T310 242 aa9.51□□□□□ -0.89
SGCA-211ENST00000514934 SCXQ7RTU7 201 aa9.51□□□□□ -0.89
SGCA-211ENST00000514934 C1orf43Q9BWL3 253 aa9.51□□□□□ -0.89
SGCA-211ENST00000514934 DPH3P1Q9H4G8 78 aa9.51□□□□□ -0.89
SGCA-211ENST00000514934 TRBV25-1A0A075B6N4 114 aa9.5□□□□□ -0.89
SGCA-211ENST00000514934 ANGP03950 147 aaKnown RBP9.5□□□□□ -0.89
SGCA-211ENST00000514934 MIAQ16674 131 aa9.5□□□□□ -0.89
SGCA-211ENST00000514934 GATD1Q8NB37 220 aa9.5□□□□□ -0.89
SGCA-211ENST00000514934 PGLYRP4Q96LB8 373 aa9.5□□□□□ -0.89
SGCA-211ENST00000514934 BIN3Q9NQY0 253 aa9.5□□□□□ -0.89
SGCA-211ENST00000514934 SMCO4Q9NRQ5 59 aa9.5□□□□□ -0.89
SGCA-211ENST00000514934 TMEM242Q9NWH2 141 aa9.5□□□□□ -0.89
SGCA-211ENST00000514934 IGLV4-60A0A075B6I1 120 aa9.49□□□□□ -0.89
SGCA-211ENST00000514934 IGHV1-24A0A0C4DH33 117 aa9.49□□□□□ -0.89
SGCA-211ENST00000514934 XKRY2A2RUG3 117 aa9.49□□□□□ -0.89
SGCA-211ENST00000514934 USP17L23D6RBM5 183 aa9.49□□□□□ -0.89
SGCA-211ENST00000514934 H7C1H1 209 aa9.49□□□□□ -0.89
SGCA-211ENST00000514934 PRSS1P07477 247 aa9.49□□□□□ -0.89
SGCA-211ENST00000514934 TRGC1P0CF51 173 aa9.49□□□□□ -0.89
SGCA-211ENST00000514934 FOXA3P55318 350 aaPredicted RBP9.49□□□□□ -0.89
SGCA-211ENST00000514934 PKIAP61925 76 aa9.49□□□□□ -0.89
SGCA-211ENST00000514934 FAM231DQ6ZW35 169 aa9.49□□□□□ -0.89
SGCA-211ENST00000514934 LINC00269Q8N2A0 174 aa9.49□□□□□ -0.89
SGCA-211ENST00000514934 NIT2Q9NQR4 276 aa9.49□□□□□ -0.89
SGCA-211ENST00000514934 NAT8Q9UHE5 227 aa9.49□□□□□ -0.89
SGCA-211ENST00000514934 A0A1B0GUV1 79 aa9.48□□□□□ -0.89
SGCA-211ENST00000514934 TMEM241Q24JQ0 296 aa9.48□□□□□ -0.89
SGCA-211ENST00000514934 CLPSL2Q6UWE3 100 aa9.48□□□□□ -0.89
SGCA-211ENST00000514934 CTDSP1Q9GZU7 261 aa9.48□□□□□ -0.89
SGCA-211ENST00000514934 TRAV26-2A0A0B4J265 109 aa9.47□□□□□ -0.89
SGCA-211ENST00000514934 ZNF727A8MUV8 499 aa9.47□□□□□ -0.89
SGCA-211ENST00000514934 FAM229AH3BQW9 127 aa9.47□□□□□ -0.89
SGCA-211ENST00000514934 KCNIP4Q6PIL6 250 aa9.47□□□□□ -0.89
SGCA-211ENST00000514934 LINC00528Q8N1L1 170 aa9.47□□□□□ -0.89
SGCA-211ENST00000514934 CHAC1Q9BUX1 264 aa9.47□□□□□ -0.89
SGCA-211ENST00000514934 CRPP02741 224 aa9.46□□□□□ -0.9
SGCA-211ENST00000514934 CIRBP-AS1Q8TBR5 109 aa9.46□□□□□ -0.9
SGCA-211ENST00000514934 DEFB104AQ8WTQ1 72 aa9.46□□□□□ -0.9
SGCA-211ENST00000514934 RPL39LQ96EH5 51 aaKnown RBP9.46□□□□□ -0.9
SGCA-211ENST00000514934 SMIM7Q9BQ49 75 aa9.46□□□□□ -0.9
SGCA-211ENST00000514934 GAS8-AS1O95177 125 aa9.45□□□□□ -0.9
SGCA-211ENST00000514934 HLA-DQA1P01909 254 aa9.45□□□□□ -0.9
SGCA-211ENST00000514934 REG3AQ06141 175 aa9.45□□□□□ -0.9
SGCA-211ENST00000514934 TWIST1Q15672 202 aa9.45□□□□□ -0.9
SGCA-211ENST00000514934 CT83Q5H943 113 aa9.45□□□□□ -0.9
SGCA-211ENST00000514934 LINC01551Q86U37 167 aa9.45□□□□□ -0.9
SGCA-211ENST00000514934 CBLN2Q8IUK8 224 aa9.45□□□□□ -0.9
SGCA-211ENST00000514934 BTF3L4Q96K17 158 aa9.45□□□□□ -0.9
SGCA-211ENST00000514934 TMEM243Q9BU79 118 aa9.45□□□□□ -0.9
SGCA-211ENST00000514934 C7orf77A4D0Y5 90 aa9.44□□□□□ -0.9
SGCA-211ENST00000514934 PANO1I0J062 215 aa9.44□□□□□ -0.9
SGCA-211ENST00000514934 PPP1R2P9O14990 202 aa9.44□□□□□ -0.9
SGCA-211ENST00000514934 MT-ND4LP03901 98 aa9.44□□□□□ -0.9
SGCA-211ENST00000514934 C14orf177Q52M58 125 aa9.44□□□□□ -0.9
SGCA-211ENST00000514934 ANAPC16Q96DE5 110 aa9.44□□□□□ -0.9
SGCA-211ENST00000514934 SLPIP03973 132 aa9.43□□□□□ -0.9
SGCA-211ENST00000514934 C9orf163Q8N9P6 203 aa9.43□□□□□ -0.9
SGCA-211ENST00000514934 RPS10P5Q9NQ39 176 aa9.43□□□□□ -0.9
SGCA-211ENST00000514934 IGLV10-54A0A075B6I4 117 aa9.42□□□□□ -0.9
SGCA-211ENST00000514934 FAM231BA6NCW3 169 aa9.42□□□□□ -0.9
SGCA-211ENST00000514934 GATCO43716 136 aaKnown RBP9.42□□□□□ -0.9
SGCA-211ENST00000514934 IMMP2LQ96T52 175 aa9.42□□□□□ -0.9
SGCA-211ENST00000514934 TRBV6-5A0A0K0K1A5 114 aa9.41□□□□□ -0.9
SGCA-211ENST00000514934 COLCA2A8K830 154 aa9.41□□□□□ -0.9
SGCA-211ENST00000514934 A8MWL6 223 aa9.41□□□□□ -0.9
SGCA-211ENST00000514934 CEBPGP53567 150 aa9.41□□□□□ -0.9
SGCA-211ENST00000514934 DGAT2L7PQ6IED9 249 aa9.41□□□□□ -0.9
SGCA-211ENST00000514934 SDIM1Q6ZPB5 146 aa9.41□□□□□ -0.9
SGCA-211ENST00000514934 RNF185Q96GF1 192 aa9.41□□□□□ -0.9
SGCA-211ENST00000514934 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.41□□□□□ -0.9
SGCA-211ENST00000514934 UBR4Q5T4S7 5183 aa9.41□□□□□ -0.9
SGCA-211ENST00000514934 TRAV8-4A0A0B4J246 113 aa9.4□□□□□ -0.9
SGCA-211ENST00000514934 AMTP48728 403 aa9.4□□□□□ -0.9
SGCA-211ENST00000514934 RAB5BP61020 215 aa9.4□□□□□ -0.9
SGCA-211ENST00000514934 CNBPP62633 177 aaKnown RBP9.4□□□□□ -0.9
SGCA-211ENST00000514934 CIRBPQ14011 172 aaKnown RBP9.4□□□□□ -0.9
SGCA-211ENST00000514934 COTL1Q14019 142 aa9.4□□□□□ -0.9
SGCA-211ENST00000514934 C15orf56Q8N910 161 aa9.4□□□□□ -0.9
SGCA-211ENST00000514934 OSTCQ9NRP0 149 aa9.4□□□□□ -0.9
SGCA-211ENST00000514934 V9GYV3 84 aa9.4□□□□□ -0.9
SGCA-211ENST00000514934 C1orf196B1AJZ1 125 aa9.39□□□□□ -0.91
SGCA-211ENST00000514934 PLA2G1BP04054 148 aaKnown RBP9.39□□□□□ -0.91
SGCA-211ENST00000514934 RPS10P46783 165 aaKnown RBP9.39□□□□□ -0.91
SGCA-211ENST00000514934 RPL23P62829 140 aaKnown RBP9.39□□□□□ -0.91
SGCA-211ENST00000514934 TSKUQ8WUA8 353 aa9.39□□□□□ -0.91
SGCA-211ENST00000514934 HMCN2Q8NDA2 5059 aa9.39□□□□□ -0.91
SGCA-211ENST00000514934 SDHAF1A6NFY7 115 aa9.38□□□□□ -0.91
SGCA-211ENST00000514934 HIGD1CA8MV81 97 aa9.38□□□□□ -0.91
SGCA-211ENST00000514934 NCR2O95944 276 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms