RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 UBE2D2P62837 147 aa2.16□□□□□ -2.06
PDLIM5-218ENST00000513341 REG3AQ06141 175 aa2.16□□□□□ -2.06
PDLIM5-218ENST00000513341 Q1RN00 199 aa2.16□□□□□ -2.06
PDLIM5-218ENST00000513341 MPV17L2Q567V2 206 aa2.16□□□□□ -2.06
PDLIM5-218ENST00000513341 MIC13Q5XKP0 118 aa2.16□□□□□ -2.06
PDLIM5-218ENST00000513341 UFSP1Q6NVU6 142 aa2.16□□□□□ -2.06
PDLIM5-218ENST00000513341 CLVS1Q8IUQ0 354 aaPredicted RBP2.16□□□□□ -2.06
PDLIM5-218ENST00000513341 LINC00269Q8N2A0 174 aa2.16□□□□□ -2.06
PDLIM5-218ENST00000513341 LYRM2Q9NU23 88 aaPredicted RBP2.16□□□□□ -2.06
PDLIM5-218ENST00000513341 Q9UF83 564 aa2.16□□□□□ -2.06
PDLIM5-218ENST00000513341 NAGKQ9UJ70 344 aa2.16□□□□□ -2.06
PDLIM5-218ENST00000513341 MUC21A0A0G2JKD1 596 aa2.15□□□□□ -2.07
PDLIM5-218ENST00000513341 H0Y9J4 135 aa2.15□□□□□ -2.07
PDLIM5-218ENST00000513341 PYYP10082 97 aa2.15□□□□□ -2.07
PDLIM5-218ENST00000513341 RNASE3P12724 160 aaKnown RBP2.15□□□□□ -2.07
PDLIM5-218ENST00000513341 CAV2P51636 162 aa2.15□□□□□ -2.07
PDLIM5-218ENST00000513341 CEBPGP53567 150 aa2.15□□□□□ -2.07
PDLIM5-218ENST00000513341 S100A10P60903 97 aa2.15□□□□□ -2.07
PDLIM5-218ENST00000513341 RANP62826 216 aaKnown RBP2.15□□□□□ -2.07
PDLIM5-218ENST00000513341 RBX1P62877 108 aa2.15□□□□□ -2.07
PDLIM5-218ENST00000513341 TPRXLQ17RH7 258 aa2.15□□□□□ -2.07
PDLIM5-218ENST00000513341 LGALSLQ3ZCW2 172 aaPredicted RBP2.15□□□□□ -2.07
PDLIM5-218ENST00000513341 FAM74A1Q5RGS3 127 aa2.15□□□□□ -2.07
PDLIM5-218ENST00000513341 KRTAP5-7Q6L8G8 165 aa2.15□□□□□ -2.07
PDLIM5-218ENST00000513341 LINC01561Q8N1V8 128 aa2.15□□□□□ -2.07
PDLIM5-218ENST00000513341 C14orf178Q8N769 122 aaPredicted RBP2.15□□□□□ -2.07
PDLIM5-218ENST00000513341 SMIM4Q8WVI0 70 aa2.15□□□□□ -2.07
PDLIM5-218ENST00000513341 AP3S1Q92572 193 aa2.15□□□□□ -2.07
PDLIM5-218ENST00000513341 FAM167A-AS1Q96KT0 104 aa2.15□□□□□ -2.07
PDLIM5-218ENST00000513341 SLIRPQ9GZT3 109 aaKnown RBP2.15□□□□□ -2.07
PDLIM5-218ENST00000513341 VCX3AQ9NNX9 186 aa2.15□□□□□ -2.07
PDLIM5-218ENST00000513341 OR5AC2Q9NZP5 309 aa2.15□□□□□ -2.07
PDLIM5-218ENST00000513341 A0A087WXM4 84 aa2.14□□□□□ -2.07
PDLIM5-218ENST00000513341 A0A096LNI7 61 aa2.14□□□□□ -2.07
PDLIM5-218ENST00000513341 ANKRD20A5PA0PJZ0 165 aa2.14□□□□□ -2.07
PDLIM5-218ENST00000513341 C7orf66A4D0T2 115 aa2.14□□□□□ -2.07
PDLIM5-218ENST00000513341 RAB19A4D1S5 217 aa2.14□□□□□ -2.07
PDLIM5-218ENST00000513341 SFT2D2O95562 160 aa2.14□□□□□ -2.07
PDLIM5-218ENST00000513341 PTTG1O95997 202 aa2.14□□□□□ -2.07
PDLIM5-218ENST00000513341 MT-ND6P03923 174 aa2.14□□□□□ -2.07
PDLIM5-218ENST00000513341 IGLV7-43P04211 117 aa2.14□□□□□ -2.07
PDLIM5-218ENST00000513341 CRYGAP11844 174 aa2.14□□□□□ -2.07
PDLIM5-218ENST00000513341 S100A11P31949 105 aa2.14□□□□□ -2.07
PDLIM5-218ENST00000513341 UBE2D1P51668 147 aa2.14□□□□□ -2.07
PDLIM5-218ENST00000513341 RAB2AP61019 212 aa2.14□□□□□ -2.07
PDLIM5-218ENST00000513341 VAMP3Q15836 100 aa2.14□□□□□ -2.07
PDLIM5-218ENST00000513341 NEDD8Q15843 81 aa2.14□□□□□ -2.07
PDLIM5-218ENST00000513341 ATP6V1FQ16864 119 aa2.14□□□□□ -2.07
PDLIM5-218ENST00000513341 C1orf137Q5JT78 98 aa2.14□□□□□ -2.07
PDLIM5-218ENST00000513341 DNLZQ5SXM8 178 aa2.14□□□□□ -2.07
PDLIM5-218ENST00000513341 FAM162BQ5T6X4 162 aa2.14□□□□□ -2.07
PDLIM5-218ENST00000513341 CMTM2Q8TAZ6 248 aa2.14□□□□□ -2.07
PDLIM5-218ENST00000513341 TSKUQ8WUA8 353 aa2.14□□□□□ -2.07
PDLIM5-218ENST00000513341 DEDD2Q8WXF8 326 aa2.14□□□□□ -2.07
PDLIM5-218ENST00000513341 FXYD5Q96DB9 178 aa2.14□□□□□ -2.07
PDLIM5-218ENST00000513341 SFRP2Q96HF1 295 aa2.14□□□□□ -2.07
PDLIM5-218ENST00000513341 DIRAS2Q96HU8 199 aa2.14□□□□□ -2.07
PDLIM5-218ENST00000513341 SLC25A21Q9BQT8 299 aaPredicted RBP2.14□□□□□ -2.07
PDLIM5-218ENST00000513341 NDFIP1Q9BT67 221 aa2.14□□□□□ -2.07
PDLIM5-218ENST00000513341 SLC25A2Q9BXI2 301 aa2.14□□□□□ -2.07
PDLIM5-218ENST00000513341 NMES1Q9C002 83 aa2.14□□□□□ -2.07
PDLIM5-218ENST00000513341 UQCC1Q9NVA1 299 aa2.14□□□□□ -2.07
PDLIM5-218ENST00000513341 IL36BQ9NZH7 164 aa2.14□□□□□ -2.07
PDLIM5-218ENST00000513341 TRBV25-1A0A075B6N4 114 aa2.13□□□□□ -2.07
PDLIM5-218ENST00000513341 GVQW2A0A096LPI5 108 aaPredicted RBP2.13□□□□□ -2.07
PDLIM5-218ENST00000513341 FAM24AA6NFZ4 105 aa2.13□□□□□ -2.07
PDLIM5-218ENST00000513341 SSSCA1O60232 199 aa2.13□□□□□ -2.07
PDLIM5-218ENST00000513341 RAB4AP20338 218 aa2.13□□□□□ -2.07
PDLIM5-218ENST00000513341 S100A4P26447 101 aaKnown RBP2.13□□□□□ -2.07
PDLIM5-218ENST00000513341 FAUP35544 74 aaKnown RBP2.13□□□□□ -2.07
PDLIM5-218ENST00000513341 TGFBR1P36897 503 aa2.13□□□□□ -2.07
PDLIM5-218ENST00000513341 SEC61GP60059 68 aa2.13□□□□□ -2.07
PDLIM5-218ENST00000513341 RAB4BP61018 213 aa2.13□□□□□ -2.07
PDLIM5-218ENST00000513341 IQCJQ1A5X6 159 aa2.13□□□□□ -2.07
PDLIM5-218ENST00000513341 C2orf66Q6UXQ4 117 aa2.13□□□□□ -2.07
PDLIM5-218ENST00000513341 C15orf56Q8N910 161 aa2.13□□□□□ -2.07
PDLIM5-218ENST00000513341 TYMSOSQ8TAI1 123 aa2.13□□□□□ -2.07
PDLIM5-218ENST00000513341 TVP23CQ96ET8 276 aa2.13□□□□□ -2.07
PDLIM5-218ENST00000513341 PHYHIPLQ96FC7 376 aa2.13□□□□□ -2.07
PDLIM5-218ENST00000513341 OTORQ9NRC9 128 aa2.13□□□□□ -2.07
PDLIM5-218ENST00000513341 MCUBQ9NWR8 336 aa2.13□□□□□ -2.07
PDLIM5-218ENST00000513341 DHRS4-AS1Q9P1J3 65 aa2.13□□□□□ -2.07
PDLIM5-218ENST00000513341 FLVCR2Q9UPI3 526 aa2.13□□□□□ -2.07
PDLIM5-218ENST00000513341 FAM74A7A6NL05 159 aa2.12□□□□□ -2.07
PDLIM5-218ENST00000513341 FABP5P3A8MUU1 101 aa2.12□□□□□ -2.07
PDLIM5-218ENST00000513341 H3BMQ9 156 aa2.12□□□□□ -2.07
PDLIM5-218ENST00000513341 GATCO43716 136 aaKnown RBP2.12□□□□□ -2.07
PDLIM5-218ENST00000513341 EIF3GO75821 320 aaKnown RBP eCLIP2.12□□□□□ -2.07
PDLIM5-218ENST00000513341 TSPAN13O95857 204 aa2.12□□□□□ -2.07
PDLIM5-218ENST00000513341 GCGP01275 180 aa2.12□□□□□ -2.07
PDLIM5-218ENST00000513341 FGF6P10767 208 aa2.12□□□□□ -2.07
PDLIM5-218ENST00000513341 CDC34P49427 236 aaPredicted RBP2.12□□□□□ -2.07
PDLIM5-218ENST00000513341 ZNF80P51504 273 aaPredicted RBP2.12□□□□□ -2.07
PDLIM5-218ENST00000513341 LSM3P62310 102 aaKnown RBP2.12□□□□□ -2.07
PDLIM5-218ENST00000513341 HBG1P69891 147 aa2.12□□□□□ -2.07
PDLIM5-218ENST00000513341 HBG2P69892 147 aa2.12□□□□□ -2.07
PDLIM5-218ENST00000513341 PPP1R1AQ13522 171 aa2.12□□□□□ -2.07
PDLIM5-218ENST00000513341 ASB16-AS1Q495Z4 193 aa2.12□□□□□ -2.07
PDLIM5-218ENST00000513341 FAM74A3Q4VXF1 159 aa2.12□□□□□ -2.07
PDLIM5-218ENST00000513341 RNASEKQ6P5S7 137 aaKnown RBP2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 147.7 ms