RNA–Protein interactions for RNA: ENST00000508619.1

LINC02171-201, Transcript of long intergenic non-protein coding RNA 2171, humanhuman

TSL 1 (best) BASIC

Gene LINC02171, Length 1,033 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02171-201ENST00000508619 LINC00269Q8N2A0 174 aa8.79□□□□□ -1
LINC02171-201ENST00000508619 RNASE7Q9H1E1 156 aaKnown RBP8.79□□□□□ -1
LINC02171-201ENST00000508619 COTL1Q14019 142 aa8.78□□□□□ -1
LINC02171-201ENST00000508619 TWIST1Q15672 202 aa8.78□□□□□ -1
LINC02171-201ENST00000508619 SCXQ7RTU7 201 aa8.78□□□□□ -1
LINC02171-201ENST00000508619 C20orf203Q8NBC4 194 aa8.78□□□□□ -1
LINC02171-201ENST00000508619 CLRN3Q8NCR9 226 aa8.78□□□□□ -1
LINC02171-201ENST00000508619 FAM210AQ96ND0 272 aa8.78□□□□□ -1
LINC02171-201ENST00000508619 A8MWL6 223 aa8.77□□□□□ -1.01
LINC02171-201ENST00000508619 NCR2O95944 276 aa8.77□□□□□ -1.01
LINC02171-201ENST00000508619 REG3AQ06141 175 aa8.77□□□□□ -1.01
LINC02171-201ENST00000508619 SMIM15Q7Z3B0 74 aa8.77□□□□□ -1.01
LINC02171-201ENST00000508619 LINC00528Q8N1L1 170 aa8.77□□□□□ -1.01
LINC02171-201ENST00000508619 GATD1Q8NB37 220 aa8.77□□□□□ -1.01
LINC02171-201ENST00000508619 GTSF1Q8WW33 167 aa8.77□□□□□ -1.01
LINC02171-201ENST00000508619 HLA-DQA1P01909 254 aa8.76□□□□□ -1.01
LINC02171-201ENST00000508619 AMTP48728 403 aa8.76□□□□□ -1.01
LINC02171-201ENST00000508619 C9orf163Q8N9P6 203 aa8.76□□□□□ -1.01
LINC02171-201ENST00000508619 FAM231BA6NCW3 169 aa8.75□□□□□ -1.01
LINC02171-201ENST00000508619 H7C423 109 aa8.75□□□□□ -1.01
LINC02171-201ENST00000508619 GATCO43716 136 aaKnown RBP8.75□□□□□ -1.01
LINC02171-201ENST00000508619 PRSS1P07477 247 aa8.75□□□□□ -1.01
LINC02171-201ENST00000508619 PEA15Q15121 130 aa8.75□□□□□ -1.01
LINC02171-201ENST00000508619 LINC01620Q4KN68 170 aa8.75□□□□□ -1.01
LINC02171-201ENST00000508619 GFRA4Q9GZZ7 299 aa8.75□□□□□ -1.01
LINC02171-201ENST00000508619 IGLV4-60A0A075B6I1 120 aa8.74□□□□□ -1.01
LINC02171-201ENST00000508619 TRBV6-5A0A0K0K1A5 114 aa8.74□□□□□ -1.01
LINC02171-201ENST00000508619 UBE2L6O14933 153 aa8.74□□□□□ -1.01
LINC02171-201ENST00000508619 CNBPP62633 177 aaKnown RBP8.74□□□□□ -1.01
LINC02171-201ENST00000508619 CLPSL2Q6UWE3 100 aa8.74□□□□□ -1.01
LINC02171-201ENST00000508619 CIRBP-AS1Q8TBR5 109 aa8.74□□□□□ -1.01
LINC02171-201ENST00000508619 DEFB104AQ8WTQ1 72 aa8.74□□□□□ -1.01
LINC02171-201ENST00000508619 LINC01551Q86U37 167 aa8.73□□□□□ -1.01
LINC02171-201ENST00000508619 SMIM7Q9BQ49 75 aa8.73□□□□□ -1.01
LINC02171-201ENST00000508619 TSKUQ8WUA8 353 aa8.72□□□□□ -1.01
LINC02171-201ENST00000508619 BORCS7Q96B45 105 aa8.72□□□□□ -1.01
LINC02171-201ENST00000508619 OSTCQ9NRP0 149 aa8.72□□□□□ -1.01
LINC02171-201ENST00000508619 TRAV26-2A0A0B4J265 109 aa8.71□□□□□ -1.02
LINC02171-201ENST00000508619 SDHAF1A6NFY7 115 aa8.71□□□□□ -1.02
LINC02171-201ENST00000508619 KRTAP29-1A8MX34 341 aaPredicted RBP8.71□□□□□ -1.02
LINC02171-201ENST00000508619 KRTAP10-4P60372 401 aaPredicted RBP8.71□□□□□ -1.02
LINC02171-201ENST00000508619 TMEM191AQ9H0A3 160 aa8.71□□□□□ -1.02
LINC02171-201ENST00000508619 IGLV10-54A0A075B6I4 117 aa8.7□□□□□ -1.02
LINC02171-201ENST00000508619 A0A1B0GUT8 65 aa8.7□□□□□ -1.02
LINC02171-201ENST00000508619 ZNF727A8MUV8 499 aa8.7□□□□□ -1.02
LINC02171-201ENST00000508619 HIGD1CA8MV81 97 aa8.7□□□□□ -1.02
LINC02171-201ENST00000508619 APCSP02743 223 aa8.7□□□□□ -1.02
LINC02171-201ENST00000508619 ZNF25P17030 456 aaPredicted RBP8.7□□□□□ -1.02
LINC02171-201ENST00000508619 CIRBPQ14011 172 aaKnown RBP8.7□□□□□ -1.02
LINC02171-201ENST00000508619 FAM74A3Q4VXF1 159 aa8.7□□□□□ -1.02
LINC02171-201ENST00000508619 CLLU1Q5K131 121 aa8.7□□□□□ -1.02
LINC02171-201ENST00000508619 SDIM1Q6ZPB5 146 aa8.7□□□□□ -1.02
LINC02171-201ENST00000508619 RPL39LQ96EH5 51 aaKnown RBP8.7□□□□□ -1.02
LINC02171-201ENST00000508619 I3L3M4 83 aa8.69□□□□□ -1.02
LINC02171-201ENST00000508619 SRP19P09132 144 aaKnown RBP8.69□□□□□ -1.02
LINC02171-201ENST00000508619 CFAP161Q6P656 301 aa8.69□□□□□ -1.02
LINC02171-201ENST00000508619 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.68□□□□□ -1.02
LINC02171-201ENST00000508619 hDV102S1A0JD36 115 aa8.68□□□□□ -1.02
LINC02171-201ENST00000508619 AMMECR1LQ6DCA0 310 aa8.68□□□□□ -1.02
LINC02171-201ENST00000508619 MRAP2Q96G30 205 aa8.68□□□□□ -1.02
LINC02171-201ENST00000508619 AP5S1Q9NUS5 200 aa8.68□□□□□ -1.02
LINC02171-201ENST00000508619 TRBV27A0A0K0K1C4 114 aa8.67□□□□□ -1.02
LINC02171-201ENST00000508619 PPP1R17O96001 155 aa8.67□□□□□ -1.02
LINC02171-201ENST00000508619 FGF6P10767 208 aa8.67□□□□□ -1.02
LINC02171-201ENST00000508619 ESDP10768 282 aa8.67□□□□□ -1.02
LINC02171-201ENST00000508619 RNF185Q96GF1 192 aa8.67□□□□□ -1.02
LINC02171-201ENST00000508619 KRTAP3-3Q9BYR6 98 aa8.67□□□□□ -1.02
LINC02171-201ENST00000508619 KRTAP3-2Q9BYR7 98 aa8.67□□□□□ -1.02
LINC02171-201ENST00000508619 SMDT1Q9H4I9 107 aa8.67□□□□□ -1.02
LINC02171-201ENST00000508619 V9GYV3 84 aa8.67□□□□□ -1.02
LINC02171-201ENST00000508619 IGHV3-64A0A075B6Q5 118 aa8.66□□□□□ -1.02
LINC02171-201ENST00000508619 PMCHP20382 165 aa8.66□□□□□ -1.02
LINC02171-201ENST00000508619 POLR2KP53803 58 aaKnown RBP8.66□□□□□ -1.02
LINC02171-201ENST00000508619 IFITM2Q01629 132 aa8.66□□□□□ -1.02
LINC02171-201ENST00000508619 RIGQ13278 110 aa8.66□□□□□ -1.02
LINC02171-201ENST00000508619 MRPL52Q86TS9 123 aaKnown RBP8.66□□□□□ -1.02
LINC02171-201ENST00000508619 COMMD7Q86VX2 200 aa8.66□□□□□ -1.02
LINC02171-201ENST00000508619 ISOC2Q96AB3 205 aa8.66□□□□□ -1.02
LINC02171-201ENST00000508619 ST20Q9HBF5 79 aa8.66□□□□□ -1.02
LINC02171-201ENST00000508619 J3QL48 77 aa8.65□□□□□ -1.02
LINC02171-201ENST00000508619 RAB4AP20338 218 aa8.65□□□□□ -1.02
LINC02171-201ENST00000508619 TMEM241Q24JQ0 296 aa8.65□□□□□ -1.02
LINC02171-201ENST00000508619 C15orf56Q8N910 161 aa8.65□□□□□ -1.02
LINC02171-201ENST00000508619 OR5A1Q8NGJ0 315 aa8.65□□□□□ -1.02
LINC02171-201ENST00000508619 BTF3L4Q96K17 158 aa8.65□□□□□ -1.02
LINC02171-201ENST00000508619 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.65□□□□□ -1.02
LINC02171-201ENST00000508619 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.64□□□□□ -1.03
LINC02171-201ENST00000508619 GVQW2A0A096LPI5 108 aaPredicted RBP8.64□□□□□ -1.03
LINC02171-201ENST00000508619 IGKV2-29A2NJV5 120 aaPredicted RBP8.64□□□□□ -1.03
LINC02171-201ENST00000508619 GAGE12HA6NDE8 117 aa8.64□□□□□ -1.03
LINC02171-201ENST00000508619 TSHBP01222 138 aa8.64□□□□□ -1.03
LINC02171-201ENST00000508619 RNASEKQ6P5S7 137 aaKnown RBP8.64□□□□□ -1.03
LINC02171-201ENST00000508619 CHCHD10Q8WYQ3 142 aaPredicted RBP8.64□□□□□ -1.03
LINC02171-201ENST00000508619 TMEM101Q96IK0 257 aa8.64□□□□□ -1.03
LINC02171-201ENST00000508619 LRP1Q07954 4544 aaKnown RBP8.63□□□□□ -1.03
LINC02171-201ENST00000508619 A0A1B0GW15 77 aa8.63□□□□□ -1.03
LINC02171-201ENST00000508619 OXTP01178 125 aa8.63□□□□□ -1.03
LINC02171-201ENST00000508619 SLPIP03973 132 aa8.63□□□□□ -1.03
LINC02171-201ENST00000508619 RPL37AP61513 92 aaKnown RBP8.63□□□□□ -1.03
LINC02171-201ENST00000508619 RPL23P62829 140 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms