RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 LINC00470Q9BZP3 86 aa-0.2□□□□□ -2.44
LSM6-205ENST00000507449 ZNF292O60281 2723 aa-0.2□□□□□ -2.44
LSM6-205ENST00000507449 AHCTF1Q8WYP5 2266 aa-0.2□□□□□ -2.44
LSM6-205ENST00000507449 NSD1Q96L73 2696 aaPredicted RBP-0.2□□□□□ -2.44
LSM6-205ENST00000507449 PXDNQ92626 1479 aa-0.21□□□□□ -2.44
LSM6-205ENST00000507449 GNG7O60262 68 aa-0.21□□□□□ -2.44
LSM6-205ENST00000507449 IFITM1P13164 125 aa-0.21□□□□□ -2.44
LSM6-205ENST00000507449 PRO0255Q9UI72 69 aa-0.21□□□□□ -2.44
LSM6-205ENST00000507449 MRC1P22897 1456 aa-0.22□□□□□ -2.44
LSM6-205ENST00000507449 DOPEY1Q5JWR5 2465 aa-0.22□□□□□ -2.44
LSM6-205ENST00000507449 MUC2Q02817 5179 aa-0.22□□□□□ -2.44
LSM6-205ENST00000507449 M0R135 149 aa-0.22□□□□□ -2.44
LSM6-205ENST00000507449 SMIM6P0DI80 62 aa-0.22□□□□□ -2.44
LSM6-205ENST00000507449 SELENOWP63302 87 aa-0.22□□□□□ -2.44
LSM6-205ENST00000507449 C10orf128Q5T292 105 aa-0.22□□□□□ -2.44
LSM6-205ENST00000507449 SNRNP25Q9BV90 132 aaKnown RBP-0.22□□□□□ -2.44
LSM6-205ENST00000507449 RERGLQ9H628 205 aa-0.22□□□□□ -2.44
LSM6-205ENST00000507449 SCN3BQ9NY72 215 aa-0.22□□□□□ -2.44
LSM6-205ENST00000507449 WNK2Q9Y3S1 2297 aa-0.22□□□□□ -2.45
LSM6-205ENST00000507449 KMT2AQ03164 3969 aa-0.22□□□□□ -2.45
LSM6-205ENST00000507449 CFTRP13569 1480 aa-0.22□□□□□ -2.45
LSM6-205ENST00000507449 A0A0D9SFI3 127 aa-0.23□□□□□ -2.45
LSM6-205ENST00000507449 CCDC58Q4VC31 144 aa-0.23□□□□□ -2.45
LSM6-205ENST00000507449 MEIG1Q5JSS6 88 aa-0.23□□□□□ -2.45
LSM6-205ENST00000507449 Q6AWC8 147 aa-0.23□□□□□ -2.45
LSM6-205ENST00000507449 ARL11Q969Q4 196 aa-0.23□□□□□ -2.45
LSM6-205ENST00000507449 NPVFQ9HCQ7 196 aa-0.23□□□□□ -2.45
LSM6-205ENST00000507449 SERP1Q9Y6X1 66 aa-0.23□□□□□ -2.45
LSM6-205ENST00000507449 R4GMQ9 66 aa-0.23□□□□□ -2.45
LSM6-205ENST00000507449 ZNF609O15014 1411 aa-0.23□□□□□ -2.45
LSM6-205ENST00000507449 RYR1P21817 5038 aa-0.23□□□□□ -2.45
LSM6-205ENST00000507449 BIVM-ERCC5R4GMW8 1640 aa-0.24□□□□□ -2.45
LSM6-205ENST00000507449 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.24□□□□□ -2.45
LSM6-205ENST00000507449 USH2AO75445 5202 aa-0.24□□□□□ -2.45
LSM6-205ENST00000507449 C10orf142B7Z368 130 aa-0.24□□□□□ -2.45
LSM6-205ENST00000507449 HERC1Q15751 4861 aa-0.24□□□□□ -2.45
LSM6-205ENST00000507449 SPEF2Q9C093 1822 aa-0.24□□□□□ -2.45
LSM6-205ENST00000507449 FAT1Q14517 4588 aa-0.25□□□□□ -2.45
LSM6-205ENST00000507449 HYDINQ4G0P3 5121 aa-0.25□□□□□ -2.45
LSM6-205ENST00000507449 BCE1O60756 84 aa-0.25□□□□□ -2.45
LSM6-205ENST00000507449 CFDP00746 253 aaPredicted RBP-0.25□□□□□ -2.45
LSM6-205ENST00000507449 S100A12P80511 92 aa-0.25□□□□□ -2.45
LSM6-205ENST00000507449 KRTAP20-2Q3LI61 65 aa-0.25□□□□□ -2.45
LSM6-205ENST00000507449 TTC9CQ8N5M4 171 aa-0.25□□□□□ -2.45
LSM6-205ENST00000507449 AQP10Q96PS8 301 aa-0.25□□□□□ -2.45
LSM6-205ENST00000507449 HERC2O95714 4834 aa-0.25□□□□□ -2.45
LSM6-205ENST00000507449 LAMC1P11047 1609 aa-0.25□□□□□ -2.45
LSM6-205ENST00000507449 PRDM2Q13029 1718 aa-0.25□□□□□ -2.45
LSM6-205ENST00000507449 NWD2Q9ULI1 1742 aa-0.25□□□□□ -2.45
LSM6-205ENST00000507449 FAM208BQ5VWN6 2430 aa-0.25□□□□□ -2.45
LSM6-205ENST00000507449 FLNCQ14315 2725 aa-0.25□□□□□ -2.45
LSM6-205ENST00000507449 RNF213Q63HN8 5207 aa-0.26□□□□□ -2.45
LSM6-205ENST00000507449 ABCA2Q9BZC7 2435 aa-0.26□□□□□ -2.45
LSM6-205ENST00000507449 ARAP2Q8WZ64 1704 aa-0.26□□□□□ -2.45
LSM6-205ENST00000507449 LOC100130705A0A1B0GUX0 176 aa-0.26□□□□□ -2.45
LSM6-205ENST00000507449 FAM25AB3EWG3 89 aa-0.26□□□□□ -2.45
LSM6-205ENST00000507449 FAM25CB3EWG5 89 aa-0.26□□□□□ -2.45
LSM6-205ENST00000507449 FAM25GB3EWG6 89 aa-0.26□□□□□ -2.45
LSM6-205ENST00000507449 SPAG11BQ08648 103 aa-0.26□□□□□ -2.45
LSM6-205ENST00000507449 C12orf73Q69YU5 71 aa-0.26□□□□□ -2.45
LSM6-205ENST00000507449 SPAG11AQ6PDA7 123 aa-0.26□□□□□ -2.45
LSM6-205ENST00000507449 COPS9Q8WXC6 57 aa-0.26□□□□□ -2.45
LSM6-205ENST00000507449 FAM107BQ9H098 131 aa-0.26□□□□□ -2.45
LSM6-205ENST00000507449 LENEPQ9Y5L5 61 aa-0.26□□□□□ -2.45
LSM6-205ENST00000507449 PHLPP1O60346 1717 aa-0.27□□□□□ -2.45
LSM6-205ENST00000507449 MBD5Q9P267 1494 aa-0.27□□□□□ -2.45
LSM6-205ENST00000507449 SPTBN2O15020 2390 aa-0.27□□□□□ -2.45
LSM6-205ENST00000507449 UBR4Q5T4S7 5183 aa-0.27□□□□□ -2.45
LSM6-205ENST00000507449 EPPK1P58107 5090 aaKnown RBP-0.27□□□□□ -2.45
LSM6-205ENST00000507449 K7EP13 123 aa-0.27□□□□□ -2.45
LSM6-205ENST00000507449 M0R3E3 92 aa-0.27□□□□□ -2.45
LSM6-205ENST00000507449 WFDC2Q14508 124 aa-0.27□□□□□ -2.45
LSM6-205ENST00000507449 AMELXQ99217 191 aa-0.27□□□□□ -2.45
LSM6-205ENST00000507449 LINC00472Q9H8W2 130 aa-0.27□□□□□ -2.45
LSM6-205ENST00000507449 TNXBP22105 4242 aa-0.27□□□□□ -2.45
LSM6-205ENST00000507449 HSPG2P98160 4391 aa-0.28□□□□□ -2.45
LSM6-205ENST00000507449 PPIP5K1Q6PFW1 1433 aa-0.28□□□□□ -2.45
LSM6-205ENST00000507449 KIAA1109Q2LD37 5005 aa-0.28□□□□□ -2.45
LSM6-205ENST00000507449 CTXND1A0A1B0GTU2 59 aa-0.28□□□□□ -2.45
LSM6-205ENST00000507449 KRTAP19-7Q3SYF9 63 aa-0.28□□□□□ -2.45
LSM6-205ENST00000507449 NAA60Q9H7X0 242 aa-0.28□□□□□ -2.45
LSM6-205ENST00000507449 MYCBP2O75592 4640 aa-0.28□□□□□ -2.45
LSM6-205ENST00000507449 NHSL1Q5SYE7 1610 aa-0.28□□□□□ -2.45
LSM6-205ENST00000507449 LPAP08519 4548 aa-0.28□□□□□ -2.45
LSM6-205ENST00000507449 SRRM2Q9UQ35 2752 aaKnown RBP-0.29□□□□□ -2.46
LSM6-205ENST00000507449 TRAV22A0A0B4J277 110 aa-0.29□□□□□ -2.46
LSM6-205ENST00000507449 HMGN1P05114 100 aa-0.29□□□□□ -2.46
LSM6-205ENST00000507449 BTG2P78543 158 aa-0.29□□□□□ -2.46
LSM6-205ENST00000507449 HAMPP81172 84 aa-0.29□□□□□ -2.46
LSM6-205ENST00000507449 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.29□□□□□ -2.46
LSM6-205ENST00000507449 SMIM4Q8WVI0 70 aa-0.29□□□□□ -2.46
LSM6-205ENST00000507449 TSLPQ969D9 159 aa-0.29□□□□□ -2.46
LSM6-205ENST00000507449 V9GYH0 126 aa-0.29□□□□□ -2.46
LSM6-205ENST00000507449 LRP6O75581 1613 aa-0.29□□□□□ -2.46
LSM6-205ENST00000507449 DOCK1Q14185 1865 aa-0.29□□□□□ -2.46
LSM6-205ENST00000507449 LRP2P98164 4655 aa-0.3□□□□□ -2.46
LSM6-205ENST00000507449 CREBBPQ92793 2442 aa-0.3□□□□□ -2.46
LSM6-205ENST00000507449 PIGBOS1A0A0B4J2F0 54 aa-0.3□□□□□ -2.46
LSM6-205ENST00000507449 Q56UQ5 140 aa-0.3□□□□□ -2.46
LSM6-205ENST00000507449 NDUFA4L2Q9NRX3 87 aa-0.3□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms