RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 LINC00588Q9Y4M8 146 aa9.75□□□□□ -0.85
RNF4-208ENST00000507247 STARD9Q9P2P6 4700 aa9.74□□□□□ -0.85
RNF4-208ENST00000507247 TRBV6-8A0A0A6YYG3 113 aa9.74□□□□□ -0.85
RNF4-208ENST00000507247 Q0VG73 95 aa9.74□□□□□ -0.85
RNF4-208ENST00000507247 LELP1Q5T871 98 aa9.74□□□□□ -0.85
RNF4-208ENST00000507247 PRSS3P2Q8NHM4 247 aa9.74□□□□□ -0.85
RNF4-208ENST00000507247 KIR2DL4Q99706 377 aa9.74□□□□□ -0.85
RNF4-208ENST00000507247 CHCHD7Q9BUK0 85 aa9.74□□□□□ -0.85
RNF4-208ENST00000507247 LINC01546A6NGU7 62 aa9.73□□□□□ -0.85
RNF4-208ENST00000507247 AMTP48728 403 aa9.73□□□□□ -0.85
RNF4-208ENST00000507247 TMEM97Q5BJF2 176 aa9.73□□□□□ -0.85
RNF4-208ENST00000507247 NIT1Q86X76 327 aa9.73□□□□□ -0.85
RNF4-208ENST00000507247 TRBV25-1A0A075B6N4 114 aa9.72□□□□□ -0.85
RNF4-208ENST00000507247 IGHV1-24A0A0C4DH33 117 aa9.72□□□□□ -0.85
RNF4-208ENST00000507247 ESDP10768 282 aa9.72□□□□□ -0.85
RNF4-208ENST00000507247 FCER1GP30273 86 aa9.72□□□□□ -0.85
RNF4-208ENST00000507247 CCL18P55774 89 aa9.72□□□□□ -0.85
RNF4-208ENST00000507247 LINC00310P59036 64 aa9.72□□□□□ -0.85
RNF4-208ENST00000507247 FA2HQ7L5A8 372 aa9.72□□□□□ -0.85
RNF4-208ENST00000507247 MRPS16Q9Y3D3 137 aaKnown RBP9.72□□□□□ -0.85
RNF4-208ENST00000507247 RNASEKQ6P5S7 137 aaKnown RBP9.71□□□□□ -0.86
RNF4-208ENST00000507247 BAGE3Q86Y29 109 aa9.71□□□□□ -0.86
RNF4-208ENST00000507247 WFDC10BQ8IUB3 73 aa9.71□□□□□ -0.86
RNF4-208ENST00000507247 TMEM243Q9BU79 118 aa9.71□□□□□ -0.86
RNF4-208ENST00000507247 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.7□□□□□ -0.86
RNF4-208ENST00000507247 IGKV2-29A2NJV5 120 aaPredicted RBP9.7□□□□□ -0.86
RNF4-208ENST00000507247 LINC00614P0C842 121 aa9.7□□□□□ -0.86
RNF4-208ENST00000507247 LAGE3Q14657 143 aa9.7□□□□□ -0.86
RNF4-208ENST00000507247 K7EMI3 77 aa9.69□□□□□ -0.86
RNF4-208ENST00000507247 NUPR1O60356 82 aa9.69□□□□□ -0.86
RNF4-208ENST00000507247 SERF1AO75920 110 aa9.69□□□□□ -0.86
RNF4-208ENST00000507247 RAB5BP61020 215 aa9.69□□□□□ -0.86
RNF4-208ENST00000507247 UBE2DNLQ8IWF7 75 aa9.69□□□□□ -0.86
RNF4-208ENST00000507247 Q8N3U1 123 aa9.69□□□□□ -0.86
RNF4-208ENST00000507247 CHCHD5Q9BSY4 110 aa9.69□□□□□ -0.86
RNF4-208ENST00000507247 UPK3BQ9BT76 320 aa9.69□□□□□ -0.86
RNF4-208ENST00000507247 AP5S1Q9NUS5 200 aa9.69□□□□□ -0.86
RNF4-208ENST00000507247 TRAV8-6A0A0B4J262 113 aa9.68□□□□□ -0.86
RNF4-208ENST00000507247 RPL39P62891 51 aaKnown RBP9.68□□□□□ -0.86
RNF4-208ENST00000507247 GAGE6Q13070 117 aa9.68□□□□□ -0.86
RNF4-208ENST00000507247 ORMDL2Q53FV1 153 aa9.68□□□□□ -0.86
RNF4-208ENST00000507247 C20orf203Q8NBC4 194 aa9.68□□□□□ -0.86
RNF4-208ENST00000507247 SACSQ9NZJ4 4579 aa9.67□□□□□ -0.86
RNF4-208ENST00000507247 A0A096LNJ9 63 aa9.67□□□□□ -0.86
RNF4-208ENST00000507247 NDUFA6P56556 154 aa9.67□□□□□ -0.86
RNF4-208ENST00000507247 PMCHL1Q16048 86 aa9.67□□□□□ -0.86
RNF4-208ENST00000507247 CHCHD1Q96BP2 118 aaKnown RBP9.67□□□□□ -0.86
RNF4-208ENST00000507247 RYR2Q92736 4967 aa9.66□□□□□ -0.86
RNF4-208ENST00000507247 UBE2L6O14933 153 aa9.66□□□□□ -0.86
RNF4-208ENST00000507247 BTF3P20290 206 aaKnown RBP9.66□□□□□ -0.86
RNF4-208ENST00000507247 MPV17L2Q567V2 206 aa9.66□□□□□ -0.86
RNF4-208ENST00000507247 LGALS9CQ6DKI2 356 aa9.66□□□□□ -0.86
RNF4-208ENST00000507247 C2orf66Q6UXQ4 117 aa9.66□□□□□ -0.86
RNF4-208ENST00000507247 H7C423 109 aa9.65□□□□□ -0.86
RNF4-208ENST00000507247 FGF6P10767 208 aa9.65□□□□□ -0.86
RNF4-208ENST00000507247 COA6Q5JTJ3 125 aaKnown RBP9.65□□□□□ -0.86
RNF4-208ENST00000507247 LINC00476Q8WZB0 136 aa9.65□□□□□ -0.86
RNF4-208ENST00000507247 PLECQ15149 4684 aaKnown RBP9.65□□□□□ -0.86
RNF4-208ENST00000507247 TENM2Q9NT68 2774 aa9.65□□□□□ -0.86
RNF4-208ENST00000507247 TMEM262E9PQX1 116 aa9.64□□□□□ -0.87
RNF4-208ENST00000507247 SIVA1O15304 175 aa9.64□□□□□ -0.87
RNF4-208ENST00000507247 HSBP1O75506 76 aa9.64□□□□□ -0.87
RNF4-208ENST00000507247 IGHV3-30P01768 117 aa9.64□□□□□ -0.87
RNF4-208ENST00000507247 IGHV3-33P01772 117 aa9.64□□□□□ -0.87
RNF4-208ENST00000507247 DNAH10OSP0CZ25 163 aa9.64□□□□□ -0.87
RNF4-208ENST00000507247 IGHV3-30-3P0DP02 117 aa9.64□□□□□ -0.87
RNF4-208ENST00000507247 IGHV3-30-5P0DP03 117 aa9.64□□□□□ -0.87
RNF4-208ENST00000507247 FAM19A2Q8N3H0 131 aa9.64□□□□□ -0.87
RNF4-208ENST00000507247 TMEM18Q96B42 140 aa9.64□□□□□ -0.87
RNF4-208ENST00000507247 TOMM6Q96B49 74 aa9.64□□□□□ -0.87
RNF4-208ENST00000507247 Q9H8V8 135 aa9.64□□□□□ -0.87
RNF4-208ENST00000507247 CYSLTR1Q9Y271 337 aa9.64□□□□□ -0.87
RNF4-208ENST00000507247 UBE2D4Q9Y2X8 147 aa9.64□□□□□ -0.87
RNF4-208ENST00000507247 IGLV4-60A0A075B6I1 120 aa9.63□□□□□ -0.87
RNF4-208ENST00000507247 RBX1P62877 108 aa9.63□□□□□ -0.87
RNF4-208ENST00000507247 LINC01556Q5JQF7 62 aa9.63□□□□□ -0.87
RNF4-208ENST00000507247 MRPL52Q86TS9 123 aaKnown RBP9.63□□□□□ -0.87
RNF4-208ENST00000507247 Q8N976 141 aa9.63□□□□□ -0.87
RNF4-208ENST00000507247 LY6G6CO95867 125 aa9.62□□□□□ -0.87
RNF4-208ENST00000507247 HBDP02042 147 aa9.62□□□□□ -0.87
RNF4-208ENST00000507247 AMMECR1LQ6DCA0 310 aa9.62□□□□□ -0.87
RNF4-208ENST00000507247 FAM104AQ969W3 186 aa9.62□□□□□ -0.87
RNF4-208ENST00000507247 TIMM21Q9BVV7 248 aa9.62□□□□□ -0.87
RNF4-208ENST00000507247 A0A087WX48 190 aa9.61□□□□□ -0.87
RNF4-208ENST00000507247 A0A1B0GUV1 79 aa9.61□□□□□ -0.87
RNF4-208ENST00000507247 G0S2P27469 103 aa9.61□□□□□ -0.87
RNF4-208ENST00000507247 PKIAP61925 76 aa9.61□□□□□ -0.87
RNF4-208ENST00000507247 PDZD11Q5EBL8 140 aa9.61□□□□□ -0.87
RNF4-208ENST00000507247 OPRPNQ99935 248 aaPredicted RBP9.61□□□□□ -0.87
RNF4-208ENST00000507247 SPANXA1Q9NS26 97 aa9.61□□□□□ -0.87
RNF4-208ENST00000507247 LYSTQ99698 3801 aa9.61□□□□□ -0.87
RNF4-208ENST00000507247 DNAH1Q9P2D7 4330 aa9.6□□□□□ -0.87
RNF4-208ENST00000507247 IGIPA6NJ69 53 aa9.6□□□□□ -0.87
RNF4-208ENST00000507247 ZNF25P17030 456 aaPredicted RBP9.6□□□□□ -0.87
RNF4-208ENST00000507247 Q6ZUT4 128 aa9.6□□□□□ -0.87
RNF4-208ENST00000507247 KRTAP1-5Q9BYS1 174 aa9.6□□□□□ -0.87
RNF4-208ENST00000507247 TMA7Q9Y2S6 64 aaKnown RBP9.6□□□□□ -0.87
RNF4-208ENST00000507247 PYGO1Q9Y3Y4 419 aa9.6□□□□□ -0.87
RNF4-208ENST00000507247 CSDC2Q9Y534 153 aaKnown RBP9.6□□□□□ -0.87
RNF4-208ENST00000507247 ALMS1Q8TCU4 4167 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms