RNA–Protein interactions for RNA: ENST00000505944.5

NR1I3-221, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-221ENST00000505944 Q5VSD8 79 aa4.67□□□□□ -1.66
NR1I3-221ENST00000505944 ZFP2Q6ZN57 461 aa4.67□□□□□ -1.66
NR1I3-221ENST00000505944 SMIM15Q7Z3B0 74 aa4.67□□□□□ -1.66
NR1I3-221ENST00000505944 PRADC1Q9BSG0 188 aa4.67□□□□□ -1.66
NR1I3-221ENST00000505944 UPK3BQ9BT76 320 aa4.67□□□□□ -1.66
NR1I3-221ENST00000505944 Q9H8V8 135 aa4.67□□□□□ -1.66
NR1I3-221ENST00000505944 LINC00588Q9Y4M8 146 aa4.67□□□□□ -1.66
NR1I3-221ENST00000505944 FAM231BA6NCW3 169 aa4.66□□□□□ -1.66
NR1I3-221ENST00000505944 D6R8Y8 96 aa4.66□□□□□ -1.66
NR1I3-221ENST00000505944 H3BNG1 76 aa4.66□□□□□ -1.66
NR1I3-221ENST00000505944 LINC00694P0DN24 101 aa4.66□□□□□ -1.66
NR1I3-221ENST00000505944 SLAQ13239 276 aa4.66□□□□□ -1.66
NR1I3-221ENST00000505944 SERTAD4-AS1Q5TG53 156 aa4.66□□□□□ -1.66
NR1I3-221ENST00000505944 WFDC10BQ8IUB3 73 aa4.66□□□□□ -1.66
NR1I3-221ENST00000505944 BTF3L4Q96K17 158 aa4.66□□□□□ -1.66
NR1I3-221ENST00000505944 CTDSP1Q9GZU7 261 aa4.66□□□□□ -1.66
NR1I3-221ENST00000505944 TMEM191AQ9H0A3 160 aa4.66□□□□□ -1.66
NR1I3-221ENST00000505944 FLG2Q5D862 2391 aaPredicted RBP4.66□□□□□ -1.66
NR1I3-221ENST00000505944 A0A087WWC5 75 aa4.65□□□□□ -1.67
NR1I3-221ENST00000505944 TRBV6-4A0A1B0GX49 114 aa4.65□□□□□ -1.67
NR1I3-221ENST00000505944 NPYP01303 97 aa4.65□□□□□ -1.67
NR1I3-221ENST00000505944 S100PP25815 95 aa4.65□□□□□ -1.67
NR1I3-221ENST00000505944 KRTAP10-2P60368 255 aa4.65□□□□□ -1.67
NR1I3-221ENST00000505944 MRPL23Q16540 153 aaKnown RBP4.65□□□□□ -1.67
NR1I3-221ENST00000505944 OR10J3Q5JRS4 329 aa4.65□□□□□ -1.67
NR1I3-221ENST00000505944 PIK3CD-AS1Q5SR53 167 aa4.65□□□□□ -1.67
NR1I3-221ENST00000505944 FAM104BQ5XKR9 115 aa4.65□□□□□ -1.67
NR1I3-221ENST00000505944 WDR73Q6P4I2 378 aa4.65□□□□□ -1.67
NR1I3-221ENST00000505944 KCNIP4Q6PIL6 250 aa4.65□□□□□ -1.67
NR1I3-221ENST00000505944 RASL11AQ6T310 242 aa4.65□□□□□ -1.67
NR1I3-221ENST00000505944 LYPD5Q6UWN5 251 aa4.65□□□□□ -1.67
NR1I3-221ENST00000505944 TMEM136Q6ZRR5 245 aa4.65□□□□□ -1.67
NR1I3-221ENST00000505944 NFE4Q86UQ8 179 aa4.65□□□□□ -1.67
NR1I3-221ENST00000505944 ATP6V0E2Q8NHE4 81 aa4.65□□□□□ -1.67
NR1I3-221ENST00000505944 K7EP13 123 aa4.64□□□□□ -1.67
NR1I3-221ENST00000505944 UBE2D3P61077 147 aa4.64□□□□□ -1.67
NR1I3-221ENST00000505944 UBE2D2P62837 147 aa4.64□□□□□ -1.67
NR1I3-221ENST00000505944 RPL36AP83881 106 aaKnown RBP4.64□□□□□ -1.67
NR1I3-221ENST00000505944 ELOBQ15370 118 aa4.64□□□□□ -1.67
NR1I3-221ENST00000505944 ATP5L2Q7Z4Y8 100 aa4.64□□□□□ -1.67
NR1I3-221ENST00000505944 NRACQ8N912 160 aa4.64□□□□□ -1.67
NR1I3-221ENST00000505944 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.64□□□□□ -1.67
NR1I3-221ENST00000505944 RPL36ALQ969Q0 106 aaKnown RBP4.64□□□□□ -1.67
NR1I3-221ENST00000505944 YPEL4Q96NS1 127 aa4.64□□□□□ -1.67
NR1I3-221ENST00000505944 KRTAP1-5Q9BYS1 174 aa4.64□□□□□ -1.67
NR1I3-221ENST00000505944 TMEM242Q9NWH2 141 aa4.64□□□□□ -1.67
NR1I3-221ENST00000505944 TNFRSF18Q9Y5U5 241 aa4.64□□□□□ -1.67
NR1I3-221ENST00000505944 TRBV7-3A0A075B6L6 115 aa4.63□□□□□ -1.67
NR1I3-221ENST00000505944 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.63□□□□□ -1.67
NR1I3-221ENST00000505944 LOC389332A0A1B0GUA5 103 aa4.63□□□□□ -1.67
NR1I3-221ENST00000505944 IGKV2-29A2NJV5 120 aaPredicted RBP4.63□□□□□ -1.67
NR1I3-221ENST00000505944 IGHV3-30P01768 117 aa4.63□□□□□ -1.67
NR1I3-221ENST00000505944 IGHV3-33P01772 117 aa4.63□□□□□ -1.67
NR1I3-221ENST00000505944 APCSP02743 223 aa4.63□□□□□ -1.67
NR1I3-221ENST00000505944 IGHV3-30-3P0DP02 117 aa4.63□□□□□ -1.67
NR1I3-221ENST00000505944 IGHV3-30-5P0DP03 117 aa4.63□□□□□ -1.67
NR1I3-221ENST00000505944 CKS2P33552 79 aa4.63□□□□□ -1.67
NR1I3-221ENST00000505944 GAGE6Q13070 117 aa4.63□□□□□ -1.67
NR1I3-221ENST00000505944 NTM-AS1Q6ZSK4 140 aa4.63□□□□□ -1.67
NR1I3-221ENST00000505944 DNAJC30Q96LL9 226 aa4.63□□□□□ -1.67
NR1I3-221ENST00000505944 GTSF1LQ9H1H1 148 aa4.63□□□□□ -1.67
NR1I3-221ENST00000505944 ST20Q9HBF5 79 aa4.63□□□□□ -1.67
NR1I3-221ENST00000505944 NIT2Q9NQR4 276 aa4.63□□□□□ -1.67
NR1I3-221ENST00000505944 MRPS16Q9Y3D3 137 aaKnown RBP4.63□□□□□ -1.67
NR1I3-221ENST00000505944 DNAH8Q96JB1 4490 aa4.63□□□□□ -1.67
NR1I3-221ENST00000505944 TRBV10-1A0A0K0K1A3 114 aa4.62□□□□□ -1.67
NR1I3-221ENST00000505944 A0A1B0GW15 77 aa4.62□□□□□ -1.67
NR1I3-221ENST00000505944 SDHAF1A6NFY7 115 aa4.62□□□□□ -1.67
NR1I3-221ENST00000505944 H7C1H1 209 aa4.62□□□□□ -1.67
NR1I3-221ENST00000505944 TNFRSF6BO95407 300 aa4.62□□□□□ -1.67
NR1I3-221ENST00000505944 XGP55808 180 aa4.62□□□□□ -1.67
NR1I3-221ENST00000505944 FABP9Q0Z7S8 132 aa4.62□□□□□ -1.67
NR1I3-221ENST00000505944 IQCJQ1A5X6 159 aa4.62□□□□□ -1.67
NR1I3-221ENST00000505944 CLPSL2Q6UWE3 100 aa4.62□□□□□ -1.67
NR1I3-221ENST00000505944 MRAP2Q96G30 205 aa4.62□□□□□ -1.67
NR1I3-221ENST00000505944 PRELID3AQ96N28 172 aa4.62□□□□□ -1.67
NR1I3-221ENST00000505944 TMEM70Q9BUB7 260 aa4.62□□□□□ -1.67
NR1I3-221ENST00000505944 SMCO4Q9NRQ5 59 aa4.62□□□□□ -1.67
NR1I3-221ENST00000505944 UBR4Q5T4S7 5183 aa4.61□□□□□ -1.67
NR1I3-221ENST00000505944 TRAV9-2A0A087WT02 112 aa4.61□□□□□ -1.67
NR1I3-221ENST00000505944 KRTAP29-1A8MX34 341 aaPredicted RBP4.61□□□□□ -1.67
NR1I3-221ENST00000505944 TCAPO15273 167 aa4.61□□□□□ -1.67
NR1I3-221ENST00000505944 CIDEAO60543 219 aa4.61□□□□□ -1.67
NR1I3-221ENST00000505944 TSHBP01222 138 aa4.61□□□□□ -1.67
NR1I3-221ENST00000505944 S100A8P05109 93 aa4.61□□□□□ -1.67
NR1I3-221ENST00000505944 LCE1DQ5T752 114 aa4.61□□□□□ -1.67
NR1I3-221ENST00000505944 DAZ4Q86SG3 579 aaKnown RBP4.61□□□□□ -1.67
NR1I3-221ENST00000505944 CHCHD5Q9BSY4 110 aa4.61□□□□□ -1.67
NR1I3-221ENST00000505944 DAZ3Q9NR90 486 aaKnown RBP4.61□□□□□ -1.67
NR1I3-221ENST00000505944 TRAPPC1Q9Y5R8 145 aa4.61□□□□□ -1.67
NR1I3-221ENST00000505944 TRBV24-1A0A075B6N3 115 aa4.6□□□□□ -1.67
NR1I3-221ENST00000505944 TRAV9-1A0A075B6T8 112 aa4.6□□□□□ -1.67
NR1I3-221ENST00000505944 TRBV6-8A0A0A6YYG3 113 aa4.6□□□□□ -1.67
NR1I3-221ENST00000505944 TMEM262E9PQX1 116 aa4.6□□□□□ -1.67
NR1I3-221ENST00000505944 SIVA1O15304 175 aa4.6□□□□□ -1.67
NR1I3-221ENST00000505944 PLA2G1BP04054 148 aaKnown RBP4.6□□□□□ -1.67
NR1I3-221ENST00000505944 PMCHP20382 165 aa4.6□□□□□ -1.67
NR1I3-221ENST00000505944 AMTP48728 403 aa4.6□□□□□ -1.67
NR1I3-221ENST00000505944 SUMO2P61956 95 aaKnown RBP4.6□□□□□ -1.67
NR1I3-221ENST00000505944 MPV17L2Q567V2 206 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms