RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 LITAFQ99732 161 aa3.03□□□□□ -1.92
RFC1-208ENST00000504849 ANAPC13Q9BS18 74 aa3.03□□□□□ -1.92
RFC1-208ENST00000504849 DPH3P1Q9H4G8 78 aa3.03□□□□□ -1.92
RFC1-208ENST00000504849 ERG28Q9UKR5 140 aa3.03□□□□□ -1.92
RFC1-208ENST00000504849 LENEPQ9Y5L5 61 aa3.03□□□□□ -1.92
RFC1-208ENST00000504849 DOCK11Q5JSL3 2073 aa3.03□□□□□ -1.92
RFC1-208ENST00000504849 NIPBLQ6KC79 2804 aaeCLIP3.03□□□□□ -1.925e-6■□□□□ 8.1
RFC1-208ENST00000504849 FN1P02751 2386 aaKnown RBP3.03□□□□□ -1.92
RFC1-208ENST00000504849 PTPRBP23467 1997 aa3.03□□□□□ -1.92
RFC1-208ENST00000504849 USF3Q68DE3 2245 aa3.03□□□□□ -1.93
RFC1-208ENST00000504849 RTTNQ86VV8 2226 aa3.03□□□□□ -1.93
RFC1-208ENST00000504849 ATMQ13315 3056 aa3.02□□□□□ -1.93
RFC1-208ENST00000504849 AHCTF1Q8WYP5 2266 aa3.02□□□□□ -1.93
RFC1-208ENST00000504849 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.02□□□□□ -1.93
RFC1-208ENST00000504849 LY6LH3BQJ8 138 aa3.02□□□□□ -1.93
RFC1-208ENST00000504849 M0R1W7 72 aa3.02□□□□□ -1.93
RFC1-208ENST00000504849 DUSP14O95147 198 aaKnown RBP3.02□□□□□ -1.93
RFC1-208ENST00000504849 LGALS1P09382 135 aaKnown RBP3.02□□□□□ -1.93
RFC1-208ENST00000504849 SCGB1C2P0DMR2 95 aa3.02□□□□□ -1.93
RFC1-208ENST00000504849 S100A4P26447 101 aaKnown RBP3.02□□□□□ -1.93
RFC1-208ENST00000504849 ZNF80P51504 273 aaPredicted RBP3.02□□□□□ -1.93
RFC1-208ENST00000504849 UBE2D1P51668 147 aa3.02□□□□□ -1.93
RFC1-208ENST00000504849 RPL18AQ02543 176 aaKnown RBP3.02□□□□□ -1.93
RFC1-208ENST00000504849 BSPH1Q075Z2 132 aa3.02□□□□□ -1.93
RFC1-208ENST00000504849 ERCC8Q13216 396 aa3.02□□□□□ -1.93
RFC1-208ENST00000504849 PRR30Q53SZ7 412 aaPredicted RBP3.02□□□□□ -1.93
RFC1-208ENST00000504849 Q6ZUT4 128 aa3.02□□□□□ -1.93
RFC1-208ENST00000504849 DYNAPQ8N1N2 210 aa3.02□□□□□ -1.93
RFC1-208ENST00000504849 NKAPP1Q8N9T2 125 aa3.02□□□□□ -1.93
RFC1-208ENST00000504849 TMEM141Q96I45 108 aa3.02□□□□□ -1.93
RFC1-208ENST00000504849 METTL26Q96S19 204 aa3.02□□□□□ -1.93
RFC1-208ENST00000504849 PRADC1Q9BSG0 188 aa3.02□□□□□ -1.93
RFC1-208ENST00000504849 SPANXDQ9BXN6 97 aa3.02□□□□□ -1.93
RFC1-208ENST00000504849 TTTY13Q9BZ97 58 aa3.02□□□□□ -1.93
RFC1-208ENST00000504849 ZNF407Q9C0G0 2248 aa3.02□□□□□ -1.93
RFC1-208ENST00000504849 LAMA1P25391 3075 aa3.02□□□□□ -1.93
RFC1-208ENST00000504849 MGAQ8IWI9 3026 aa3.02□□□□□ -1.93
RFC1-208ENST00000504849 CENPEQ02224 2701 aa3.01□□□□□ -1.93
RFC1-208ENST00000504849 OTOGQ6ZRI0 2925 aa3.01□□□□□ -1.93
RFC1-208ENST00000504849 F8P00451 2351 aa3.01□□□□□ -1.93
RFC1-208ENST00000504849 FBN1P35555 2871 aaKnown RBP3.01□□□□□ -1.93
RFC1-208ENST00000504849 APC2O95996 2303 aa3.01□□□□□ -1.93
RFC1-208ENST00000504849 IGHV3OR16-10A0A075B7F0 116 aa3.01□□□□□ -1.93
RFC1-208ENST00000504849 TRAV21A0A0B4J279 112 aa3.01□□□□□ -1.93
RFC1-208ENST00000504849 EPM2AB3EWF7 344 aa3.01□□□□□ -1.93
RFC1-208ENST00000504849 H3BVH4 76 aa3.01□□□□□ -1.93
RFC1-208ENST00000504849 OVOL1O14753 267 aa3.01□□□□□ -1.93
RFC1-208ENST00000504849 SNCGO76070 127 aa3.01□□□□□ -1.93
RFC1-208ENST00000504849 MGPP08493 103 aa3.01□□□□□ -1.93
RFC1-208ENST00000504849 LGALS3P17931 250 aaKnown RBP3.01□□□□□ -1.93
RFC1-208ENST00000504849 HLA-DMBP28068 263 aa3.01□□□□□ -1.93
RFC1-208ENST00000504849 EFNA4P52798 201 aa3.01□□□□□ -1.93
RFC1-208ENST00000504849 UBE2D3P61077 147 aa3.01□□□□□ -1.93
RFC1-208ENST00000504849 UBE2D2P62837 147 aa3.01□□□□□ -1.93
RFC1-208ENST00000504849 ATXN8Q156A1 80 aa3.01□□□□□ -1.93
RFC1-208ENST00000504849 MINOS1Q5TGZ0 78 aa3.01□□□□□ -1.93
RFC1-208ENST00000504849 MORN3Q6PF18 240 aaPredicted RBP3.01□□□□□ -1.93
RFC1-208ENST00000504849 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.01□□□□□ -1.93
RFC1-208ENST00000504849 SBSPONQ8IVN8 264 aa3.01□□□□□ -1.93
RFC1-208ENST00000504849 OR10J6PQ8NGY7 276 aa3.01□□□□□ -1.93
RFC1-208ENST00000504849 LINC00477Q96M19 166 aa3.01□□□□□ -1.93
RFC1-208ENST00000504849 DUX3Q96PT4 197 aa3.01□□□□□ -1.93
RFC1-208ENST00000504849 MINOS1-NBL1R4GNA1 71 aa3.01□□□□□ -1.93
RFC1-208ENST00000504849 MTORP42345 2549 aa3.01□□□□□ -1.93
RFC1-208ENST00000504849 SPENQ96T58 3664 aaKnown RBP3.01□□□□□ -1.93
RFC1-208ENST00000504849 SDK2Q58EX2 2172 aa3.01□□□□□ -1.93
RFC1-208ENST00000504849 PDZD2O15018 2839 aa3.01□□□□□ -1.93
RFC1-208ENST00000504849 COL27A1Q8IZC6 1860 aaPredicted RBP3.01□□□□□ -1.93
RFC1-208ENST00000504849 TET2Q6N021 2002 aaPredicted RBP3□□□□□ -1.93
RFC1-208ENST00000504849 CABIN1Q9Y6J0 2220 aa3□□□□□ -1.93
RFC1-208ENST00000504849 TRBV7-1A0A0A6YYK4 115 aa3□□□□□ -1.93
RFC1-208ENST00000504849 TRAV8-2A0A0B4J237 113 aa3□□□□□ -1.93
RFC1-208ENST00000504849 TRAV8-4A0A0B4J246 113 aa3□□□□□ -1.93
RFC1-208ENST00000504849 A0A0B4J2C4 111 aa3□□□□□ -1.93
RFC1-208ENST00000504849 IGKV3D-20A0A0C4DH25 116 aa3□□□□□ -1.93
RFC1-208ENST00000504849 IGHV3-35A0A0C4DH35 117 aa3□□□□□ -1.93
RFC1-208ENST00000504849 IGHV7-4-1A0A0J9YVY3 117 aa3□□□□□ -1.93
RFC1-208ENST00000504849 CENPVL3A0A0U1RRI6 287 aa3□□□□□ -1.93
RFC1-208ENST00000504849 SPAARA0A1B0GVQ0 90 aa3□□□□□ -1.93
RFC1-208ENST00000504849 C11orf86A6NJI1 115 aa3□□□□□ -1.93
RFC1-208ENST00000504849 ODF3BA8MYP8 253 aa3□□□□□ -1.93
RFC1-208ENST00000504849 MT-ATP8P03928 68 aa3□□□□□ -1.93
RFC1-208ENST00000504849 TRGV3P03979 118 aa3□□□□□ -1.93
RFC1-208ENST00000504849 CTSGP08311 255 aa3□□□□□ -1.93
RFC1-208ENST00000504849 P0DMU3 169 aa3□□□□□ -1.93
RFC1-208ENST00000504849 FAM231AP0DMU4 169 aa3□□□□□ -1.93
RFC1-208ENST00000504849 FAM231CP0DMU5 169 aa3□□□□□ -1.93
RFC1-208ENST00000504849 PRTN3P24158 256 aa3□□□□□ -1.93
RFC1-208ENST00000504849 PFN2P35080 140 aa3□□□□□ -1.93
RFC1-208ENST00000504849 ATP5G2Q06055 141 aa3□□□□□ -1.93
RFC1-208ENST00000504849 ESPL1Q14674 2120 aa3□□□□□ -1.93
RFC1-208ENST00000504849 PMVKQ15126 192 aa3□□□□□ -1.93
RFC1-208ENST00000504849 TTC32Q5I0X7 151 aa3□□□□□ -1.93
RFC1-208ENST00000504849 Q6Q795 121 aa3□□□□□ -1.93
RFC1-208ENST00000504849 NDUFA11Q86Y39 141 aa3□□□□□ -1.93
RFC1-208ENST00000504849 C10orf126Q8N4M7 172 aa3□□□□□ -1.93
RFC1-208ENST00000504849 ANKRD29Q8N6D5 301 aa3□□□□□ -1.93
RFC1-208ENST00000504849 LY6G5BQ8NDX9 201 aa3□□□□□ -1.93
RFC1-208ENST00000504849 TIMM17AQ99595 171 aa3□□□□□ -1.93
RFC1-208ENST00000504849 KIR2DL4Q99706 377 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms