RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 USP24Q9UPU5 2620 aa13.17□□□□□ -0.3
POLR2J3-209ENST00000504157 IGHV1-58A0A0C4DH39 117 aa13.17□□□□□ -0.3
POLR2J3-209ENST00000504157 A0A087WWL8 130 aa13.16□□□□□ -0.3
POLR2J3-209ENST00000504157 PRRC2AP48634 2157 aaKnown RBP13.16□□□□□ -0.3
POLR2J3-209ENST00000504157 MRPS36P82909 103 aaKnown RBP13.16□□□□□ -0.3
POLR2J3-209ENST00000504157 C5orf56Q8N8D9 126 aa13.16□□□□□ -0.3
POLR2J3-209ENST00000504157 ADGRG4Q8IZF6 3080 aa13.15□□□□□ -0.3
POLR2J3-209ENST00000504157 TIMM17BO60830 172 aa13.15□□□□□ -0.3
POLR2J3-209ENST00000504157 SPTA1P02549 2419 aa13.15□□□□□ -0.3
POLR2J3-209ENST00000504157 FBXL19-AS1Q494R0 122 aa13.15□□□□□ -0.3
POLR2J3-209ENST00000504157 CYSTM1Q9H1C7 97 aa13.15□□□□□ -0.3
POLR2J3-209ENST00000504157 CACNA1BQ00975 2339 aa13.15□□□□□ -0.3
POLR2J3-209ENST00000504157 COX7A2LO14548 114 aa13.15□□□□□ -0.31
POLR2J3-209ENST00000504157 ZFP36P26651 326 aaKnown RBP13.15□□□□□ -0.31
POLR2J3-209ENST00000504157 DEFB1P60022 68 aa13.15□□□□□ -0.31
POLR2J3-209ENST00000504157 DAZ2Q13117 558 aaKnown RBP13.15□□□□□ -0.31
POLR2J3-209ENST00000504157 UNQ9165/PRO28630Q6UXU0 137 aa13.15□□□□□ -0.31
POLR2J3-209ENST00000504157 DAZ4Q86SG3 579 aaKnown RBP13.15□□□□□ -0.31
POLR2J3-209ENST00000504157 DAZ1Q9NQZ3 744 aaKnown RBP13.15□□□□□ -0.31
POLR2J3-209ENST00000504157 DAZ3Q9NR90 486 aaKnown RBP13.15□□□□□ -0.31
POLR2J3-209ENST00000504157 M0QY20 66 aa13.14□□□□□ -0.31
POLR2J3-209ENST00000504157 NPC2P61916 151 aa13.14□□□□□ -0.31
POLR2J3-209ENST00000504157 C11orf71Q6IPW1 123 aa13.14□□□□□ -0.31
POLR2J3-209ENST00000504157 C9orf85Q96MD7 179 aa13.13□□□□□ -0.31
POLR2J3-209ENST00000504157 POLEQ07864 2286 aa13.13□□□□□ -0.31
POLR2J3-209ENST00000504157 F6UB75 175 aa13.13□□□□□ -0.31
POLR2J3-209ENST00000504157 TACC2O95359 2948 aa13.13□□□□□ -0.31
POLR2J3-209ENST00000504157 KIR2DL5BQ8NHK3 375 aa13.12□□□□□ -0.31
POLR2J3-209ENST00000504157 VSIG2Q96IQ7 327 aa13.12□□□□□ -0.31
POLR2J3-209ENST00000504157 SAA4P35542 130 aa13.12□□□□□ -0.31
POLR2J3-209ENST00000504157 RPL18AQ02543 176 aaKnown RBP13.12□□□□□ -0.31
POLR2J3-209ENST00000504157 KLRB1Q12918 225 aa13.12□□□□□ -0.31
POLR2J3-209ENST00000504157 BEAN1Q3B7T3 259 aa13.12□□□□□ -0.31
POLR2J3-209ENST00000504157 TIRAPP58753 221 aa13.11□□□□□ -0.31
POLR2J3-209ENST00000504157 RPL11P62913 178 aaKnown RBP13.11□□□□□ -0.31
POLR2J3-209ENST00000504157 EPG5Q9HCE0 2579 aa13.11□□□□□ -0.31
POLR2J3-209ENST00000504157 F5H768 121 aa13.11□□□□□ -0.31
POLR2J3-209ENST00000504157 FAM222AQ5U5X8 452 aa13.11□□□□□ -0.31
POLR2J3-209ENST00000504157 UPK3BQ9BT76 320 aa13.11□□□□□ -0.31
POLR2J3-209ENST00000504157 PYGO1Q9Y3Y4 419 aa13.11□□□□□ -0.31
POLR2J3-209ENST00000504157 C22orf24Q9Y442 160 aa13.11□□□□□ -0.31
POLR2J3-209ENST00000504157 OXTP01178 125 aa13.1□□□□□ -0.31
POLR2J3-209ENST00000504157 INAFM2P0DMQ5 153 aa13.1□□□□□ -0.31
POLR2J3-209ENST00000504157 ABCA4P78363 2273 aa13.1□□□□□ -0.31
POLR2J3-209ENST00000504157 BAALC-AS2P0C853 105 aa13.09□□□□□ -0.31
POLR2J3-209ENST00000504157 FAM104AQ969W3 186 aa13.09□□□□□ -0.31
POLR2J3-209ENST00000504157 IGHV3-16A0A0C4DH30 117 aa13.09□□□□□ -0.31
POLR2J3-209ENST00000504157 IGHV3OR16-10A0A075B7F0 116 aa13.08□□□□□ -0.32
POLR2J3-209ENST00000504157 C4orf26Q17RF5 130 aa13.08□□□□□ -0.32
POLR2J3-209ENST00000504157 Q5XG85 94 aa13.08□□□□□ -0.32
POLR2J3-209ENST00000504157 SERP2Q8N6R1 65 aa13.08□□□□□ -0.32
POLR2J3-209ENST00000504157 MOB4Q9Y3A3 225 aa13.08□□□□□ -0.32
POLR2J3-209ENST00000504157 TRBV12-3P01733 135 aa13.08□□□□□ -0.32
POLR2J3-209ENST00000504157 FAM74A4Q5TZK3 123 aa13.08□□□□□ -0.32
POLR2J3-209ENST00000504157 TRAV12-3A0A0B4J271 114 aa13.07□□□□□ -0.32
POLR2J3-209ENST00000504157 USMG5Q96IX5 58 aa13.07□□□□□ -0.32
POLR2J3-209ENST00000504157 PCNX1Q96RV3 2341 aa13.07□□□□□ -0.32
POLR2J3-209ENST00000504157 CSMD1Q96PZ7 3565 aa13.07□□□□□ -0.32
POLR2J3-209ENST00000504157 H3BUA1 57 aa13.07□□□□□ -0.32
POLR2J3-209ENST00000504157 CD28P10747 220 aa13.07□□□□□ -0.32
POLR2J3-209ENST00000504157 TINCRA0A1B0GVN0 87 aa13.06□□□□□ -0.32
POLR2J3-209ENST00000504157 GRNP28799 593 aaKnown RBP13.06□□□□□ -0.32
POLR2J3-209ENST00000504157 MRAPQ8TCY5 172 aa13.06□□□□□ -0.32
POLR2J3-209ENST00000504157 A8MZ25 164 aa13.05□□□□□ -0.32
POLR2J3-209ENST00000504157 IGSF10Q6WRI0 2623 aa13.05□□□□□ -0.32
POLR2J3-209ENST00000504157 DSCR8Q96T75 97 aa13.05□□□□□ -0.32
POLR2J3-209ENST00000504157 RHPN1-AS1Q9BWJ2 59 aa13.05□□□□□ -0.32
POLR2J3-209ENST00000504157 COL6A6A6NMZ7 2263 aa13.05□□□□□ -0.32
POLR2J3-209ENST00000504157 HRCT1Q6UXD1 115 aa13.03□□□□□ -0.32
POLR2J3-209ENST00000504157 ZFYVE26Q68DK2 2539 aa13.03□□□□□ -0.32
POLR2J3-209ENST00000504157 TRAV13-1A0A0B4J241 112 aa13.03□□□□□ -0.32
POLR2J3-209ENST00000504157 LINC00308Q8TCZ7 52 aa13.03□□□□□ -0.32
POLR2J3-209ENST00000504157 RELNP78509 3460 aa13.02□□□□□ -0.33
POLR2J3-209ENST00000504157 NDUFA1O15239 70 aa13.02□□□□□ -0.33
POLR2J3-209ENST00000504157 NBASA2RRP1 2371 aa13.02□□□□□ -0.33
POLR2J3-209ENST00000504157 CIRBPQ14011 172 aaKnown RBP13.01□□□□□ -0.33
POLR2J3-209ENST00000504157 Q6JHZ5 121 aa13.01□□□□□ -0.33
POLR2J3-209ENST00000504157 Q8N2B8 174 aa13□□□□□ -0.33
POLR2J3-209ENST00000504157 K7EMT4 169 aa13□□□□□ -0.33
POLR2J3-209ENST00000504157 BBC3Q96PG8 261 aaPredicted RBP12.99□□□□□ -0.33
POLR2J3-209ENST00000504157 NACAE9PAV3 2078 aa12.99□□□□□ -0.33
POLR2J3-209ENST00000504157 IGKV3-7A0A075B6H7 116 aa12.98□□□□□ -0.33
POLR2J3-209ENST00000504157 ZNF415Q09FC8 603 aa12.98□□□□□ -0.33
POLR2J3-209ENST00000504157 IGHV1OR15-1A0A075B7D0 117 aa12.98□□□□□ -0.33
POLR2J3-209ENST00000504157 MALP21145 153 aa12.98□□□□□ -0.33
POLR2J3-209ENST00000504157 COPS9Q8WXC6 57 aa12.98□□□□□ -0.33
POLR2J3-209ENST00000504157 FAM218AQ96MZ4 157 aa12.98□□□□□ -0.33
POLR2J3-209ENST00000504157 RNF152Q8N8N0 203 aa12.97□□□□□ -0.33
POLR2J3-209ENST00000504157 ANKHD1Q8IWZ3 2542 aaKnown RBP12.97□□□□□ -0.33
POLR2J3-209ENST00000504157 DCHS2Q6V1P9 2916 aa12.97□□□□□ -0.33
POLR2J3-209ENST00000504157 PRB1P04280 392 aa12.97□□□□□ -0.33
POLR2J3-209ENST00000504157 PRIMA1Q86XR5 153 aa12.97□□□□□ -0.33
POLR2J3-209ENST00000504157 RNASE13Q5GAN3 156 aaKnown RBP12.96□□□□□ -0.33
POLR2J3-209ENST00000504157 CFAP46Q8IYW2 2715 aa12.96□□□□□ -0.33
POLR2J3-209ENST00000504157 USP17L23D6RBM5 183 aa12.96□□□□□ -0.34
POLR2J3-209ENST00000504157 LINC01561Q8N1V8 128 aa12.96□□□□□ -0.34
POLR2J3-209ENST00000504157 DNAL4O96015 105 aa12.95□□□□□ -0.34
POLR2J3-209ENST00000504157 IGHG2P01859 326 aa12.95□□□□□ -0.34
POLR2J3-209ENST00000504157 SYNJ2BPP57105 145 aa12.95□□□□□ -0.34
POLR2J3-209ENST00000504157 LMO4P61968 165 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms