RNA–Protein interactions for RNA: ENST00000503942.1

UBE3D-205, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 3

Gene UBE3D, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-205ENST00000503942 KCNIP2Q9NS61 270 aa2.24□□□□□ -2.05
UBE3D-205ENST00000503942 U3KQK5 164 aa2.24□□□□□ -2.05
UBE3D-205ENST00000503942 DNAH1Q9P2D7 4330 aa2.23□□□□□ -2.05
UBE3D-205ENST00000503942 TRAV12-3A0A0B4J271 114 aa2.23□□□□□ -2.05
UBE3D-205ENST00000503942 CXorf1O96002 111 aa2.23□□□□□ -2.05
UBE3D-205ENST00000503942 MBP02144 154 aa2.23□□□□□ -2.05
UBE3D-205ENST00000503942 SLC25A5P05141 298 aaKnown RBP2.23□□□□□ -2.05
UBE3D-205ENST00000503942 S100A7P31151 101 aa2.23□□□□□ -2.05
UBE3D-205ENST00000503942 ATP5G3P48201 142 aa2.23□□□□□ -2.05
UBE3D-205ENST00000503942 TAS2R45P59539 299 aa2.23□□□□□ -2.05
UBE3D-205ENST00000503942 RBX1P62877 108 aa2.23□□□□□ -2.05
UBE3D-205ENST00000503942 BTN1A1Q13410 526 aa2.23□□□□□ -2.05
UBE3D-205ENST00000503942 PDE6HQ13956 83 aa2.23□□□□□ -2.05
UBE3D-205ENST00000503942 GUK1Q16774 197 aa2.23□□□□□ -2.05
UBE3D-205ENST00000503942 ZFAND6Q6FIF0 208 aa2.23□□□□□ -2.05
UBE3D-205ENST00000503942 EBLN2Q6P2I7 272 aa2.23□□□□□ -2.05
UBE3D-205ENST00000503942 ZNF767PQ75MW2 155 aa2.23□□□□□ -2.05
UBE3D-205ENST00000503942 S100A7AQ86SG5 101 aa2.23□□□□□ -2.05
UBE3D-205ENST00000503942 SLC7A5P1Q8MH63 180 aa2.23□□□□□ -2.05
UBE3D-205ENST00000503942 ORMDL3Q8N138 153 aa2.23□□□□□ -2.05
UBE3D-205ENST00000503942 ZFAND2AQ8N6M9 145 aa2.23□□□□□ -2.05
UBE3D-205ENST00000503942 OR11H2Q8NH07 326 aa2.23□□□□□ -2.05
UBE3D-205ENST00000503942 SFT2D1Q8WV19 159 aa2.23□□□□□ -2.05
UBE3D-205ENST00000503942 MBD3L1Q8WWY6 194 aa2.23□□□□□ -2.05
UBE3D-205ENST00000503942 OTORQ9NRC9 128 aa2.23□□□□□ -2.05
UBE3D-205ENST00000503942 CHTOPQ9Y3Y2 248 aaKnown RBP2.23□□□□□ -2.05
UBE3D-205ENST00000503942 LYSTQ99698 3801 aa2.23□□□□□ -2.05
UBE3D-205ENST00000503942 TENM2Q9NT68 2774 aa2.22□□□□□ -2.05
UBE3D-205ENST00000503942 VPS13DQ5THJ4 4388 aa2.22□□□□□ -2.05
UBE3D-205ENST00000503942 TRAV8-6A0A0B4J262 113 aa2.22□□□□□ -2.05
UBE3D-205ENST00000503942 F6UZH7 168 aa2.22□□□□□ -2.05
UBE3D-205ENST00000503942 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.22□□□□□ -2.05
UBE3D-205ENST00000503942 HTN1P15515 57 aa2.22□□□□□ -2.05
UBE3D-205ENST00000503942 RNASE4P34096 147 aaKnown RBP2.22□□□□□ -2.05
UBE3D-205ENST00000503942 ZNF80P51504 273 aaPredicted RBP2.22□□□□□ -2.05
UBE3D-205ENST00000503942 EMP1P54849 157 aa2.22□□□□□ -2.05
UBE3D-205ENST00000503942 SAMD13Q5VXD3 122 aa2.22□□□□□ -2.05
UBE3D-205ENST00000503942 MORN3Q6PF18 240 aaPredicted RBP2.22□□□□□ -2.05
UBE3D-205ENST00000503942 SPINT4Q6UDR6 99 aa2.22□□□□□ -2.05
UBE3D-205ENST00000503942 ZNF705AQ6ZN79 300 aaPredicted RBP2.22□□□□□ -2.05
UBE3D-205ENST00000503942 Q8NAQ8 132 aa2.22□□□□□ -2.05
UBE3D-205ENST00000503942 IGF2BP2-AS1Q96M15 143 aa2.22□□□□□ -2.05
UBE3D-205ENST00000503942 TMEM167BQ9NRX6 74 aa2.22□□□□□ -2.05
UBE3D-205ENST00000503942 ZNF492Q9P255 531 aa2.22□□□□□ -2.05
UBE3D-205ENST00000503942 GNG13Q9P2W3 67 aa2.22□□□□□ -2.05
UBE3D-205ENST00000503942 EPDR1Q9UM22 224 aa2.22□□□□□ -2.05
UBE3D-205ENST00000503942 PRELID1Q9Y255 219 aa2.22□□□□□ -2.05
UBE3D-205ENST00000503942 TP53TG1Q9Y2A0 90 aa2.22□□□□□ -2.05
UBE3D-205ENST00000503942 ALMS1Q8TCU4 4167 aa2.22□□□□□ -2.05
UBE3D-205ENST00000503942 KMT2CQ8NEZ4 4911 aaKnown RBP2.21□□□□□ -2.06
UBE3D-205ENST00000503942 KMT2AQ03164 3969 aa2.21□□□□□ -2.06
UBE3D-205ENST00000503942 TRAV8-4A0A0B4J246 113 aa2.21□□□□□ -2.06
UBE3D-205ENST00000503942 TRAV1-1A0A0B4J248 108 aa2.21□□□□□ -2.06
UBE3D-205ENST00000503942 A0A1W2PRE2 83 aa2.21□□□□□ -2.06
UBE3D-205ENST00000503942 RAB19A4D1S5 217 aa2.21□□□□□ -2.06
UBE3D-205ENST00000503942 UMAD1C9J7I0 102 aa2.21□□□□□ -2.06
UBE3D-205ENST00000503942 GNRH2O43555 120 aa2.21□□□□□ -2.06
UBE3D-205ENST00000503942 SCO1O75880 301 aa2.21□□□□□ -2.06
UBE3D-205ENST00000503942 IFNA7P01567 189 aa2.21□□□□□ -2.06
UBE3D-205ENST00000503942 P01737 135 aa2.21□□□□□ -2.06
UBE3D-205ENST00000503942 TCRAP04437 139 aa2.21□□□□□ -2.06
UBE3D-205ENST00000503942 CSN1S1P47710 185 aa2.21□□□□□ -2.06
UBE3D-205ENST00000503942 CRIP1P50238 77 aa2.21□□□□□ -2.06
UBE3D-205ENST00000503942 EIF5AP63241 154 aaKnown RBP2.21□□□□□ -2.06
UBE3D-205ENST00000503942 IFITM2Q01629 132 aa2.21□□□□□ -2.06
UBE3D-205ENST00000503942 TMEM78Q5T7P6 136 aa2.21□□□□□ -2.06
UBE3D-205ENST00000503942 PRNTQ86SH4 94 aa2.21□□□□□ -2.06
UBE3D-205ENST00000503942 TMEM75Q8N9X5 138 aa2.21□□□□□ -2.06
UBE3D-205ENST00000503942 C5orf17Q8NAS9 161 aa2.21□□□□□ -2.06
UBE3D-205ENST00000503942 ZNF680Q8NEM1 530 aa2.21□□□□□ -2.06
UBE3D-205ENST00000503942 CMTM2Q8TAZ6 248 aa2.21□□□□□ -2.06
UBE3D-205ENST00000503942 LINC01587Q99440 93 aa2.21□□□□□ -2.06
UBE3D-205ENST00000503942 C20orf144Q9BQM9 153 aa2.21□□□□□ -2.06
UBE3D-205ENST00000503942 TMEM208Q9BTX3 173 aa2.21□□□□□ -2.06
UBE3D-205ENST00000503942 DERL1Q9BUN8 251 aa2.21□□□□□ -2.06
UBE3D-205ENST00000503942 SND1-IT1Q9HBX3 110 aa2.21□□□□□ -2.06
UBE3D-205ENST00000503942 C7orf71A4D174 169 aa2.2□□□□□ -2.06
UBE3D-205ENST00000503942 RBAKDNA6NC62 111 aa2.2□□□□□ -2.06
UBE3D-205ENST00000503942 A8MWL6 223 aa2.2□□□□□ -2.06
UBE3D-205ENST00000503942 C9JQL5 133 aa2.2□□□□□ -2.06
UBE3D-205ENST00000503942 GPX1P07203 203 aa2.2□□□□□ -2.06
UBE3D-205ENST00000503942 NMBP08949 121 aa2.2□□□□□ -2.06
UBE3D-205ENST00000503942 TSPOP30536 169 aa2.2□□□□□ -2.06
UBE3D-205ENST00000503942 AKR1C3P42330 323 aa2.2□□□□□ -2.06
UBE3D-205ENST00000503942 RAB5CP51148 216 aa2.2□□□□□ -2.06
UBE3D-205ENST00000503942 FLI1Q01543 452 aaPredicted RBP2.2□□□□□ -2.06
UBE3D-205ENST00000503942 RRN3P1Q2M238 152 aa2.2□□□□□ -2.06
UBE3D-205ENST00000503942 C12orf74Q32Q52 190 aa2.2□□□□□ -2.06
UBE3D-205ENST00000503942 EIF5AL1Q6IS14 154 aaKnown RBP2.2□□□□□ -2.06
UBE3D-205ENST00000503942 TEX261Q6UWH6 196 aa2.2□□□□□ -2.06
UBE3D-205ENST00000503942 DPPA3Q6W0C5 159 aa2.2□□□□□ -2.06
UBE3D-205ENST00000503942 Q86TA4 180 aa2.2□□□□□ -2.06
UBE3D-205ENST00000503942 MUC7Q8TAX7 377 aa2.2□□□□□ -2.06
UBE3D-205ENST00000503942 ZC2HC1AQ96GY0 325 aa2.2□□□□□ -2.06
UBE3D-205ENST00000503942 ODF3Q96PU9 254 aa2.2□□□□□ -2.06
UBE3D-205ENST00000503942 C11orf68Q9H3H3 251 aaKnown RBP2.2□□□□□ -2.06
UBE3D-205ENST00000503942 TREM1Q9NP99 234 aa2.2□□□□□ -2.06
UBE3D-205ENST00000503942 NOP10Q9NPE3 64 aaKnown RBP2.2□□□□□ -2.06
UBE3D-205ENST00000503942 NAGKQ9UJ70 344 aa2.2□□□□□ -2.06
UBE3D-205ENST00000503942 ARL2-SNX15V9GYD0 113 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms