RNA–Protein interactions for RNA: ENST00000503057.5

LIMCH1-205, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-205ENST00000503057 INSL3P51460 131 aa7.99□□□□□ -1.13
LIMCH1-205ENST00000503057 POLR2KP53803 58 aaKnown RBP7.99□□□□□ -1.13
LIMCH1-205ENST00000503057 Q6ZSV7 163 aa7.99□□□□□ -1.13
LIMCH1-205ENST00000503057 SND1-IT1Q9HBX3 110 aa7.99□□□□□ -1.13
LIMCH1-205ENST00000503057 ACYP1P07311 99 aa7.99□□□□□ -1.13
LIMCH1-205ENST00000503057 RS1O15537 224 aa7.99□□□□□ -1.13
LIMCH1-205ENST00000503057 CRLF1O75462 422 aa7.99□□□□□ -1.13
LIMCH1-205ENST00000503057 BAALC-AS2P0C853 105 aa7.99□□□□□ -1.13
LIMCH1-205ENST00000503057 MRPL23Q16540 153 aaKnown RBP7.99□□□□□ -1.13
LIMCH1-205ENST00000503057 LINC00467Q9BRT7 94 aa7.99□□□□□ -1.13
LIMCH1-205ENST00000503057 DAND5Q8N907 189 aa7.98□□□□□ -1.13
LIMCH1-205ENST00000503057 TRBV10-2A0A0K0K1G8 114 aa7.98□□□□□ -1.13
LIMCH1-205ENST00000503057 AVPP01185 164 aa7.98□□□□□ -1.13
LIMCH1-205ENST00000503057 TSHBP01222 138 aa7.98□□□□□ -1.13
LIMCH1-205ENST00000503057 SPART-AS1P0CW21 52 aa7.98□□□□□ -1.13
LIMCH1-205ENST00000503057 H7C423 109 aa7.98□□□□□ -1.13
LIMCH1-205ENST00000503057 Q6ZTI0 123 aa7.98□□□□□ -1.13
LIMCH1-205ENST00000503057 H0YGX0 51 aa7.98□□□□□ -1.13
LIMCH1-205ENST00000503057 WFDC11Q8NEX6 87 aa7.98□□□□□ -1.13
LIMCH1-205ENST00000503057 ARHGAP32A7KAX9 2087 aa7.98□□□□□ -1.13
LIMCH1-205ENST00000503057 COX7A2LO14548 114 aa7.97□□□□□ -1.13
LIMCH1-205ENST00000503057 C15orf53Q8NAA6 179 aa7.97□□□□□ -1.13
LIMCH1-205ENST00000503057 TCL1BO95988 128 aa7.97□□□□□ -1.13
LIMCH1-205ENST00000503057 CRYGDP07320 174 aa7.97□□□□□ -1.13
LIMCH1-205ENST00000503057 DEFB121Q5J5C9 76 aa7.97□□□□□ -1.13
LIMCH1-205ENST00000503057 UBE2DNLQ8IWF7 75 aa7.97□□□□□ -1.13
LIMCH1-205ENST00000503057 PIK3CD-AS1Q5SR53 167 aa7.96□□□□□ -1.13
LIMCH1-205ENST00000503057 H3BT86 120 aa7.96□□□□□ -1.13
LIMCH1-205ENST00000503057 ORMDL1Q9P0S3 153 aa7.96□□□□□ -1.14
LIMCH1-205ENST00000503057 PTPRBP23467 1997 aa7.96□□□□□ -1.14
LIMCH1-205ENST00000503057 A0A096LNJ9 63 aa7.95□□□□□ -1.14
LIMCH1-205ENST00000503057 F8WEM9 126 aa7.95□□□□□ -1.14
LIMCH1-205ENST00000503057 UBL5Q9BZL1 73 aa7.95□□□□□ -1.14
LIMCH1-205ENST00000503057 BDP1A6H8Y1 2624 aa7.95□□□□□ -1.14
LIMCH1-205ENST00000503057 CXCL5P42830 114 aa7.95□□□□□ -1.14
LIMCH1-205ENST00000503057 TIRAPP58753 221 aa7.95□□□□□ -1.14
LIMCH1-205ENST00000503057 PRO0255Q9UI72 69 aa7.95□□□□□ -1.14
LIMCH1-205ENST00000503057 EDA2RQ9HAV5 297 aa7.95□□□□□ -1.14
LIMCH1-205ENST00000503057 PROK1P58294 105 aa7.94□□□□□ -1.14
LIMCH1-205ENST00000503057 CHD7Q9P2D1 2997 aa7.94□□□□□ -1.14
LIMCH1-205ENST00000503057 NKAPP1Q8N9T2 125 aa7.94□□□□□ -1.14
LIMCH1-205ENST00000503057 C18orf65Q6ZTR6 163 aa7.94□□□□□ -1.14
LIMCH1-205ENST00000503057 IGIPA6NJ69 53 aa7.93□□□□□ -1.14
LIMCH1-205ENST00000503057 IGHV3-30P01768 117 aa7.93□□□□□ -1.14
LIMCH1-205ENST00000503057 IGHV3-30-5P0DP03 117 aa7.93□□□□□ -1.14
LIMCH1-205ENST00000503057 CLEC2BQ92478 149 aa7.93□□□□□ -1.14
LIMCH1-205ENST00000503057 SMIM9A6NGZ8 99 aa7.93□□□□□ -1.14
LIMCH1-205ENST00000503057 RMI2Q96E14 147 aa7.93□□□□□ -1.14
LIMCH1-205ENST00000503057 CDKN2A-AS1Q9UH64 79 aa7.93□□□□□ -1.14
LIMCH1-205ENST00000503057 IGLV2-18A0A075B6J9 118 aa7.93□□□□□ -1.14
LIMCH1-205ENST00000503057 EDN2P20800 178 aa7.93□□□□□ -1.14
LIMCH1-205ENST00000503057 NDUFA1O15239 70 aa7.93□□□□□ -1.14
LIMCH1-205ENST00000503057 C9orf153Q5TBE3 101 aa7.93□□□□□ -1.14
LIMCH1-205ENST00000503057 HIST2H2BCQ6DN03 193 aa7.93□□□□□ -1.14
LIMCH1-205ENST00000503057 PSCAO43653 123 aa7.92□□□□□ -1.14
LIMCH1-205ENST00000503057 DEFB135Q30KP9 77 aa7.92□□□□□ -1.14
LIMCH1-205ENST00000503057 MIR7-3HGQ8N6C7 128 aa7.92□□□□□ -1.14
LIMCH1-205ENST00000503057 TRBV6-4A0A1B0GX49 114 aa7.92□□□□□ -1.14
LIMCH1-205ENST00000503057 IGLV10-54A0A075B6I4 117 aa7.92□□□□□ -1.14
LIMCH1-205ENST00000503057 LINC01546A6NGU7 62 aa7.92□□□□□ -1.14
LIMCH1-205ENST00000503057 UBE2D4Q9Y2X8 147 aa7.92□□□□□ -1.14
LIMCH1-205ENST00000503057 PIEZO2Q9H5I5 2752 aa7.91□□□□□ -1.14
LIMCH1-205ENST00000503057 FAM208BQ5VWN6 2430 aa7.91□□□□□ -1.14
LIMCH1-205ENST00000503057 DSCR8Q96T75 97 aa7.91□□□□□ -1.14
LIMCH1-205ENST00000503057 TIMM17BO60830 172 aa7.91□□□□□ -1.14
LIMCH1-205ENST00000503057 MRPS36P82909 103 aaKnown RBP7.91□□□□□ -1.14
LIMCH1-205ENST00000503057 SPANXCQ9NY87 97 aa7.91□□□□□ -1.14
LIMCH1-205ENST00000503057 LYRM9A8MSI8 78 aa7.91□□□□□ -1.14
LIMCH1-205ENST00000503057 PTH2Q96A98 100 aa7.91□□□□□ -1.14
LIMCH1-205ENST00000503057 RBX1P62877 108 aa7.9□□□□□ -1.14
LIMCH1-205ENST00000503057 TRBV30A0A0K0K1B3 111 aa7.9□□□□□ -1.14
LIMCH1-205ENST00000503057 CITED1Q99966 193 aa7.89□□□□□ -1.15
LIMCH1-205ENST00000503057 IGHV3-33P01772 117 aa7.89□□□□□ -1.15
LIMCH1-205ENST00000503057 COL27A1Q8IZC6 1860 aaPredicted RBP7.89□□□□□ -1.15
LIMCH1-205ENST00000503057 LINC01006Q8NI28 216 aa7.89□□□□□ -1.15
LIMCH1-205ENST00000503057 C1orf43Q9BWL3 253 aa7.89□□□□□ -1.15
LIMCH1-205ENST00000503057 IGLV4-69A0A075B6H9 119 aa7.89□□□□□ -1.15
LIMCH1-205ENST00000503057 IGKV2D-24A0A075B6R9 120 aa7.89□□□□□ -1.15
LIMCH1-205ENST00000503057 ESM1Q9NQ30 184 aa7.89□□□□□ -1.15
LIMCH1-205ENST00000503057 LINC00308Q8TCZ7 52 aa7.88□□□□□ -1.15
LIMCH1-205ENST00000503057 TRBV6-8A0A0A6YYG3 113 aa7.88□□□□□ -1.15
LIMCH1-205ENST00000503057 H3BQ85 93 aa7.88□□□□□ -1.15
LIMCH1-205ENST00000503057 HIST2H2BDQ6DRA6 164 aa7.88□□□□□ -1.15
LIMCH1-205ENST00000503057 CUL9Q8IWT3 2517 aa7.88□□□□□ -1.15
LIMCH1-205ENST00000503057 CAMK2N2Q96S95 79 aa7.88□□□□□ -1.15
LIMCH1-205ENST00000503057 DEFB4AO15263 64 aa7.88□□□□□ -1.15
LIMCH1-205ENST00000503057 CHD9Q3L8U1 2897 aa7.87□□□□□ -1.15
LIMCH1-205ENST00000503057 UBE2D1P51668 147 aa7.87□□□□□ -1.15
LIMCH1-205ENST00000503057 NOTCH3Q9UM47 2321 aa7.87□□□□□ -1.15
LIMCH1-205ENST00000503057 TRIAP1O43715 76 aa7.87□□□□□ -1.15
LIMCH1-205ENST00000503057 IGF2RP11717 2491 aa7.86□□□□□ -1.15
LIMCH1-205ENST00000503057 SPAG11BQ08648 103 aa7.86□□□□□ -1.15
LIMCH1-205ENST00000503057 UFSP1Q6NVU6 142 aa7.86□□□□□ -1.15
LIMCH1-205ENST00000503057 FAM222AQ5U5X8 452 aa7.86□□□□□ -1.15
LIMCH1-205ENST00000503057 SPG11Q96JI7 2443 aa7.86□□□□□ -1.15
LIMCH1-205ENST00000503057 TMEM126AQ9H061 195 aa7.86□□□□□ -1.15
LIMCH1-205ENST00000503057 C5orf42Q9H799 3197 aa7.86□□□□□ -1.15
LIMCH1-205ENST00000503057 IBA57-AS1B1ANH7 110 aa7.85□□□□□ -1.15
LIMCH1-205ENST00000503057 LECT2O14960 151 aa7.85□□□□□ -1.15
LIMCH1-205ENST00000503057 HAMPP81172 84 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms