RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 DGAT2L7PQ6IED9 249 aa10.27□□□□□ -0.77
MUC1-220ENST00000498431 KRTAP26-1Q6PEX3 210 aa10.27□□□□□ -0.77
MUC1-220ENST00000498431 SDIM1Q6ZPB5 146 aa10.27□□□□□ -0.77
MUC1-220ENST00000498431 NEXN-AS1Q8NBZ9 246 aa10.27□□□□□ -0.77
MUC1-220ENST00000498431 OR10G8Q8NGN5 311 aa10.27□□□□□ -0.77
MUC1-220ENST00000498431 CT83Q5H943 113 aa10.26□□□□□ -0.77
MUC1-220ENST00000498431 C10orf91Q5T1B1 145 aa10.26□□□□□ -0.77
MUC1-220ENST00000498431 CLPSL2Q6UWE3 100 aa10.26□□□□□ -0.77
MUC1-220ENST00000498431 Q6ZRU5 148 aa10.26□□□□□ -0.77
MUC1-220ENST00000498431 SLC7A5P1Q8MH63 180 aa10.26□□□□□ -0.77
MUC1-220ENST00000498431 A8MWL6 223 aa10.25□□□□□ -0.77
MUC1-220ENST00000498431 GZMBP10144 247 aa10.25□□□□□ -0.77
MUC1-220ENST00000498431 ZFP82Q8N141 532 aa10.25□□□□□ -0.77
MUC1-220ENST00000498431 FER1L6-AS1Q8NA97 138 aa10.25□□□□□ -0.77
MUC1-220ENST00000498431 CHCHD5Q9BSY4 110 aa10.25□□□□□ -0.77
MUC1-220ENST00000498431 CARHSP1Q9Y2V2 147 aaKnown RBP10.25□□□□□ -0.77
MUC1-220ENST00000498431 PPP1R2P9O14990 202 aa10.24□□□□□ -0.77
MUC1-220ENST00000498431 OR5AL1P0C617 328 aa10.24□□□□□ -0.77
MUC1-220ENST00000498431 MIAQ16674 131 aa10.24□□□□□ -0.77
MUC1-220ENST00000498431 NTM-AS1Q6ZSK4 140 aa10.24□□□□□ -0.77
MUC1-220ENST00000498431 SSBP4Q9BWG4 385 aaPredicted RBP10.24□□□□□ -0.77
MUC1-220ENST00000498431 PRR34Q9NV39 138 aa10.24□□□□□ -0.77
MUC1-220ENST00000498431 V9GYV3 84 aa10.24□□□□□ -0.77
MUC1-220ENST00000498431 F2Z2F3 143 aa10.23□□□□□ -0.77
MUC1-220ENST00000498431 SNAI2O43623 268 aa10.23□□□□□ -0.77
MUC1-220ENST00000498431 MT-ND4LP03901 98 aa10.23□□□□□ -0.77
MUC1-220ENST00000498431 IGLC6P0CF74 106 aa10.23□□□□□ -0.77
MUC1-220ENST00000498431 CIRBPQ14011 172 aaKnown RBP10.23□□□□□ -0.77
MUC1-220ENST00000498431 ZNF56Q15929 161 aa10.23□□□□□ -0.77
MUC1-220ENST00000498431 TSKUQ8WUA8 353 aa10.23□□□□□ -0.77
MUC1-220ENST00000498431 TPPP3Q9BW30 176 aa10.23□□□□□ -0.77
MUC1-220ENST00000498431 RAB4BP61018 213 aa10.22□□□□□ -0.77
MUC1-220ENST00000498431 LINC00269Q8N2A0 174 aa10.22□□□□□ -0.77
MUC1-220ENST00000498431 ANAPC16Q96DE5 110 aa10.22□□□□□ -0.77
MUC1-220ENST00000498431 GFRA4Q9GZZ7 299 aa10.22□□□□□ -0.77
MUC1-220ENST00000498431 FAM231BA6NCW3 169 aa10.21□□□□□ -0.77
MUC1-220ENST00000498431 CHTF8P0CG12 524 aa10.21□□□□□ -0.77
MUC1-220ENST00000498431 RBX1P62877 108 aa10.21□□□□□ -0.77
MUC1-220ENST00000498431 CACNG7P62955 275 aa10.21□□□□□ -0.77
MUC1-220ENST00000498431 GAGE6Q13070 117 aa10.21□□□□□ -0.77
MUC1-220ENST00000498431 ODF1Q14990 250 aa10.21□□□□□ -0.77
MUC1-220ENST00000498431 SPANXN1Q5VSR9 72 aa10.21□□□□□ -0.77
MUC1-220ENST00000498431 LYZL1Q6UWQ5 148 aa10.21□□□□□ -0.77
MUC1-220ENST00000498431 OR10AG1Q8NH19 301 aa10.21□□□□□ -0.77
MUC1-220ENST00000498431 CTRLP40313 264 aa10.2□□□□□ -0.78
MUC1-220ENST00000498431 FOXA3P55318 350 aaPredicted RBP10.2□□□□□ -0.78
MUC1-220ENST00000498431 WDR73Q6P4I2 378 aa10.2□□□□□ -0.78
MUC1-220ENST00000498431 GTSF1Q8WW33 167 aa10.2□□□□□ -0.78
MUC1-220ENST00000498431 IGLV10-54A0A075B6I4 117 aa10.19□□□□□ -0.78
MUC1-220ENST00000498431 MUC21A0A0G2JKD1 596 aa10.19□□□□□ -0.78
MUC1-220ENST00000498431 MUC21A0A140T8X8 626 aa10.19□□□□□ -0.78
MUC1-220ENST00000498431 APOC3P02656 99 aa10.19□□□□□ -0.78
MUC1-220ENST00000498431 CNBPP62633 177 aaKnown RBP10.19□□□□□ -0.78
MUC1-220ENST00000498431 CLRN3Q8NCR9 226 aa10.19□□□□□ -0.78
MUC1-220ENST00000498431 BORCS7Q96B45 105 aa10.19□□□□□ -0.78
MUC1-220ENST00000498431 PGLYRP4Q96LB8 373 aa10.19□□□□□ -0.78
MUC1-220ENST00000498431 A0A087WYN8 130 aa10.18□□□□□ -0.78
MUC1-220ENST00000498431 SMIM27A0A1W2PRY6 76 aa10.18□□□□□ -0.78
MUC1-220ENST00000498431 HIGD1CA8MV81 97 aa10.18□□□□□ -0.78
MUC1-220ENST00000498431 SLPIP03973 132 aa10.18□□□□□ -0.78
MUC1-220ENST00000498431 SSTP61278 116 aa10.18□□□□□ -0.78
MUC1-220ENST00000498431 PKIAP61925 76 aa10.18□□□□□ -0.78
MUC1-220ENST00000498431 RHEBQ15382 184 aa10.18□□□□□ -0.78
MUC1-220ENST00000498431 SVBPQ8N300 66 aa10.18□□□□□ -0.78
MUC1-220ENST00000498431 CTDSP1Q9GZU7 261 aa10.18□□□□□ -0.78
MUC1-220ENST00000498431 NAT8BQ9UHF3 227 aa10.18□□□□□ -0.78
MUC1-220ENST00000498431 hDV102S1A0JD36 115 aa10.17□□□□□ -0.78
MUC1-220ENST00000498431 CNFNQ9BYD5 112 aa10.17□□□□□ -0.78
MUC1-220ENST00000498431 C7orf77A4D0Y5 90 aa10.16□□□□□ -0.78
MUC1-220ENST00000498431 F5H697 171 aa10.16□□□□□ -0.78
MUC1-220ENST00000498431 SNAPINO95295 136 aa10.16□□□□□ -0.78
MUC1-220ENST00000498431 NTF3P20783 257 aa10.16□□□□□ -0.78
MUC1-220ENST00000498431 SPACA4Q8TDM5 124 aa10.16□□□□□ -0.78
MUC1-220ENST00000498431 DPH3Q96FX2 82 aa10.16□□□□□ -0.78
MUC1-220ENST00000498431 IGHV3-64A0A075B6Q5 118 aa10.15□□□□□ -0.78
MUC1-220ENST00000498431 A0A1B0GUT8 65 aa10.15□□□□□ -0.78
MUC1-220ENST00000498431 PHOX2AO14813 284 aa10.15□□□□□ -0.78
MUC1-220ENST00000498431 REG3AQ06141 175 aa10.15□□□□□ -0.78
MUC1-220ENST00000498431 TWIST1Q15672 202 aa10.15□□□□□ -0.78
MUC1-220ENST00000498431 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.15□□□□□ -0.78
MUC1-220ENST00000498431 NUP35Q8NFH5 326 aa10.15□□□□□ -0.78
MUC1-220ENST00000498431 RPS10P5Q9NQ39 176 aa10.15□□□□□ -0.78
MUC1-220ENST00000498431 TRBV25-1A0A075B6N4 114 aa10.14□□□□□ -0.79
MUC1-220ENST00000498431 TRGC1P0CF51 173 aa10.14□□□□□ -0.79
MUC1-220ENST00000498431 RIGQ13278 110 aa10.14□□□□□ -0.79
MUC1-220ENST00000498431 TMEM97Q5BJF2 176 aa10.14□□□□□ -0.79
MUC1-220ENST00000498431 C20orf203Q8NBC4 194 aa10.14□□□□□ -0.79
MUC1-220ENST00000498431 RNF185Q96GF1 192 aa10.14□□□□□ -0.79
MUC1-220ENST00000498431 AP1S3Q96PC3 154 aa10.14□□□□□ -0.79
MUC1-220ENST00000498431 IMMP2LQ96T52 175 aa10.14□□□□□ -0.79
MUC1-220ENST00000498431 TMEM242Q9NWH2 141 aa10.14□□□□□ -0.79
MUC1-220ENST00000498431 KIF25-AS1Q9Y6Z4 181 aa10.14□□□□□ -0.79
MUC1-220ENST00000498431 SMIM17P0DL12 118 aa10.13□□□□□ -0.79
MUC1-220ENST00000498431 IQCJQ1A5X6 159 aa10.13□□□□□ -0.79
MUC1-220ENST00000498431 PLAC8Q9NZF1 115 aa10.13□□□□□ -0.79
MUC1-220ENST00000498431 IGLV4-60A0A075B6I1 120 aa10.12□□□□□ -0.79
MUC1-220ENST00000498431 SMIM15Q7Z3B0 74 aa10.12□□□□□ -0.79
MUC1-220ENST00000498431 IGHV1-24A0A0C4DH33 117 aa10.11□□□□□ -0.79
MUC1-220ENST00000498431 S100PP25815 95 aa10.11□□□□□ -0.79
MUC1-220ENST00000498431 LINC01600Q96MT4 127 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms