RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 TRAV13-2A0A0B4J235 113 aa1.84□□□□□ -2.11
CALD1-224ENST00000498254 A0A0J9YX75 114 aa1.84□□□□□ -2.11
CALD1-224ENST00000498254 LOC285095A0A1B0GVY8 99 aa1.84□□□□□ -2.11
CALD1-224ENST00000498254 A0A1B0GW54 56 aa1.84□□□□□ -2.11
CALD1-224ENST00000498254 C2orf70A6NJV1 201 aa1.84□□□□□ -2.11
CALD1-224ENST00000498254 C5orf67F2Z3F1 127 aa1.84□□□□□ -2.11
CALD1-224ENST00000498254 H3BVH4 76 aa1.84□□□□□ -2.11
CALD1-224ENST00000498254 C19orf84I3L1E1 186 aa1.84□□□□□ -2.11
CALD1-224ENST00000498254 GNRH2O43555 120 aa1.84□□□□□ -2.11
CALD1-224ENST00000498254 IGLV1-51P01701 117 aa1.84□□□□□ -2.11
CALD1-224ENST00000498254 IGHV1-69P01742 117 aa1.84□□□□□ -2.11
CALD1-224ENST00000498254 TFF1P04155 84 aa1.84□□□□□ -2.11
CALD1-224ENST00000498254 ACYP1P07311 99 aa1.84□□□□□ -2.11
CALD1-224ENST00000498254 NCBP2-AS2Q69YL0 99 aa1.84□□□□□ -2.11
CALD1-224ENST00000498254 ZCCHC23Q6ZST2 131 aa1.84□□□□□ -2.11
CALD1-224ENST00000498254 Q8IYB0 196 aa1.84□□□□□ -2.11
CALD1-224ENST00000498254 FAM19A2Q8N3H0 131 aa1.84□□□□□ -2.11
CALD1-224ENST00000498254 CNEP1R1Q8N9A8 125 aa1.84□□□□□ -2.11
CALD1-224ENST00000498254 PFN4Q8NHR9 129 aa1.84□□□□□ -2.11
CALD1-224ENST00000498254 TMEM141Q96I45 108 aa1.84□□□□□ -2.11
CALD1-224ENST00000498254 CEP170BQ9Y4F5 1589 aaPredicted RBP1.84□□□□□ -2.12
CALD1-224ENST00000498254 CICQ96RK0 1608 aaPredicted RBP1.84□□□□□ -2.12
CALD1-224ENST00000498254 NYNRINQ9P2P1 1898 aaKnown RBP1.84□□□□□ -2.12
CALD1-224ENST00000498254 C5P01031 1676 aa1.83□□□□□ -2.12
CALD1-224ENST00000498254 KIAA1549Q9HCM3 1950 aa1.83□□□□□ -2.12
CALD1-224ENST00000498254 TRBV6-7A0A0A0MS04 114 aa1.83□□□□□ -2.12
CALD1-224ENST00000498254 TRBV7-1A0A0A6YYK4 115 aa1.83□□□□□ -2.12
CALD1-224ENST00000498254 TCRBV4S1A1TA0A5B7 111 aa1.83□□□□□ -2.12
CALD1-224ENST00000498254 FAM223BA6NKX1 122 aa1.83□□□□□ -2.12
CALD1-224ENST00000498254 IQCF6A8MYZ5 107 aa1.83□□□□□ -2.12
CALD1-224ENST00000498254 NDUFC1O43677 76 aa1.83□□□□□ -2.12
CALD1-224ENST00000498254 PRH1P02810 166 aa1.83□□□□□ -2.12
CALD1-224ENST00000498254 FXYD7P58549 80 aa1.83□□□□□ -2.12
CALD1-224ENST00000498254 SPANXN1Q5VSR9 72 aa1.83□□□□□ -2.12
CALD1-224ENST00000498254 C20orf197Q8N268 126 aa1.83□□□□□ -2.12
CALD1-224ENST00000498254 Q8N814 137 aa1.83□□□□□ -2.12
CALD1-224ENST00000498254 PPP1R1CQ8WVI7 109 aa1.83□□□□□ -2.12
CALD1-224ENST00000498254 ZNF462Q96JM2 2506 aa1.83□□□□□ -2.12
CALD1-224ENST00000498254 IQGAP1P46940 1657 aa1.83□□□□□ -2.12
CALD1-224ENST00000498254 WDR90Q96KV7 1748 aa1.83□□□□□ -2.12
CALD1-224ENST00000498254 TNS1Q9HBL0 1735 aaKnown RBP1.83□□□□□ -2.12
CALD1-224ENST00000498254 FMN2Q9NZ56 1722 aa1.83□□□□□ -2.12
CALD1-224ENST00000498254 COL14A1Q05707 1796 aaKnown RBP1.82□□□□□ -2.12
CALD1-224ENST00000498254 MED12LQ86YW9 2145 aa1.82□□□□□ -2.12
CALD1-224ENST00000498254 GBF1Q92538 1859 aa1.82□□□□□ -2.12
CALD1-224ENST00000498254 ARHGEF5Q12774 1597 aa1.82□□□□□ -2.12
CALD1-224ENST00000498254 MAST1Q9Y2H9 1570 aa1.82□□□□□ -2.12
CALD1-224ENST00000498254 hDV103S1A0JD37 113 aa1.82□□□□□ -2.12
CALD1-224ENST00000498254 C11orf86A6NJI1 115 aa1.82□□□□□ -2.12
CALD1-224ENST00000498254 HCG22E2RYF7 251 aa1.82□□□□□ -2.12
CALD1-224ENST00000498254 NPYP01303 97 aa1.82□□□□□ -2.12
CALD1-224ENST00000498254 RPL28P46779 137 aaKnown RBP1.82□□□□□ -2.12
CALD1-224ENST00000498254 SPINT3P49223 89 aa1.82□□□□□ -2.12
CALD1-224ENST00000498254 SMIM11AP58511 58 aa1.82□□□□□ -2.12
CALD1-224ENST00000498254 KRTAP10-10P60014 251 aa1.82□□□□□ -2.12
CALD1-224ENST00000498254 DEFB121Q5J5C9 76 aa1.82□□□□□ -2.12
CALD1-224ENST00000498254 C1orf134Q5TEV5 83 aa1.82□□□□□ -2.12
CALD1-224ENST00000498254 HCP5Q6MZN7 132 aa1.82□□□□□ -2.12
CALD1-224ENST00000498254 DYNLRB2Q8TF09 96 aa1.82□□□□□ -2.12
CALD1-224ENST00000498254 SMIM4Q8WVI0 70 aa1.82□□□□□ -2.12
CALD1-224ENST00000498254 SMIM7Q9BQ49 75 aa1.82□□□□□ -2.12
CALD1-224ENST00000498254 XAGE1AQ9HD64 81 aa1.82□□□□□ -2.12
CALD1-224ENST00000498254 TJP1Q07157 1748 aa1.82□□□□□ -2.12
CALD1-224ENST00000498254 LOC285556D6RIA3 1793 aa1.82□□□□□ -2.12
CALD1-224ENST00000498254 MGAMO43451 1857 aa1.82□□□□□ -2.12
CALD1-224ENST00000498254 PLXNA3P51805 1871 aa1.82□□□□□ -2.12
CALD1-224ENST00000498254 PAPPAQ13219 1627 aa1.81□□□□□ -2.12
CALD1-224ENST00000498254 LTBP4Q8N2S1 1624 aa1.81□□□□□ -2.12
CALD1-224ENST00000498254 COL4A6Q14031 1691 aa1.81□□□□□ -2.12
CALD1-224ENST00000498254 GCC2Q8IWJ2 1684 aa1.81□□□□□ -2.12
CALD1-224ENST00000498254 MUC22E2RYF6 1773 aaPredicted RBP1.81□□□□□ -2.12
CALD1-224ENST00000498254 LAMB2P55268 1798 aa1.81□□□□□ -2.12
CALD1-224ENST00000498254 A0A1B0GWA3 101 aa1.81□□□□□ -2.12
CALD1-224ENST00000498254 E7EUB6 86 aa1.81□□□□□ -2.12
CALD1-224ENST00000498254 F8WEM9 126 aa1.81□□□□□ -2.12
CALD1-224ENST00000498254 H3BPC8 53 aa1.81□□□□□ -2.12
CALD1-224ENST00000498254 CRPP02741 224 aa1.81□□□□□ -2.12
CALD1-224ENST00000498254 CAV3P56539 151 aa1.81□□□□□ -2.12
CALD1-224ENST00000498254 UBE2D3P61077 147 aa1.81□□□□□ -2.12
CALD1-224ENST00000498254 UBE2D2P62837 147 aa1.81□□□□□ -2.12
CALD1-224ENST00000498254 KLKP1Q107X0 134 aa1.81□□□□□ -2.12
CALD1-224ENST00000498254 ASB16-AS1Q495Z4 193 aa1.81□□□□□ -2.12
CALD1-224ENST00000498254 SLC48A1Q6P1K1 146 aa1.81□□□□□ -2.12
CALD1-224ENST00000498254 VMO1Q7Z5L0 202 aa1.81□□□□□ -2.12
CALD1-224ENST00000498254 Q96M85 177 aa1.81□□□□□ -2.12
CALD1-224ENST00000498254 C20orf166-AS1Q96NR2 134 aa1.81□□□□□ -2.12
CALD1-224ENST00000498254 DYNLRB1Q9NP97 96 aa1.81□□□□□ -2.12
CALD1-224ENST00000498254 LTBP2Q14767 1821 aa1.81□□□□□ -2.12
CALD1-224ENST00000498254 GREB1Q4ZG55 1949 aa1.81□□□□□ -2.12
CALD1-224ENST00000498254 NUMA1Q14980 2115 aa1.81□□□□□ -2.12
CALD1-224ENST00000498254 CPS1P31327 1500 aa1.81□□□□□ -2.12
CALD1-224ENST00000498254 MYO9BQ13459 2157 aa1.81□□□□□ -2.12
CALD1-224ENST00000498254 KIF21BO75037 1637 aa1.8□□□□□ -2.12
CALD1-224ENST00000498254 CHD8Q9HCK8 2581 aa1.8□□□□□ -2.12
CALD1-224ENST00000498254 PLXNA2O75051 1894 aa1.8□□□□□ -2.12
CALD1-224ENST00000498254 DLG5Q8TDM6 1919 aa1.8□□□□□ -2.12
CALD1-224ENST00000498254 ARHGAP32A7KAX9 2087 aa1.8□□□□□ -2.12
CALD1-224ENST00000498254 TRAV22A0A0B4J277 110 aa1.8□□□□□ -2.12
CALD1-224ENST00000498254 PIGBOS1A0A0B4J2F0 54 aa1.8□□□□□ -2.12
CALD1-224ENST00000498254 TEX49A0A1B0GTD5 131 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms