RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 F6UB75 175 aa9.53□□□□□ -0.88
VEGFA-215ENST00000497139 PRORYQ9H606 182 aa9.53□□□□□ -0.88
VEGFA-215ENST00000497139 SPTBN4Q9H254 2564 aa9.52□□□□□ -0.88
VEGFA-215ENST00000497139 ZFHX4Q86UP3 3567 aa9.52□□□□□ -0.88
VEGFA-215ENST00000497139 PF4P02776 101 aa9.52□□□□□ -0.89
VEGFA-215ENST00000497139 MALP21145 153 aa9.52□□□□□ -0.89
VEGFA-215ENST00000497139 CEP295Q9C0D2 2601 aa9.52□□□□□ -0.89
VEGFA-215ENST00000497139 DNAL4O96015 105 aa9.51□□□□□ -0.89
VEGFA-215ENST00000497139 DEFB1P60022 68 aa9.51□□□□□ -0.89
VEGFA-215ENST00000497139 TRAV13-1A0A0B4J241 112 aa9.51□□□□□ -0.89
VEGFA-215ENST00000497139 TRAV12-3A0A0B4J271 114 aa9.51□□□□□ -0.89
VEGFA-215ENST00000497139 C19orf54Q5BKX5 351 aa9.51□□□□□ -0.89
VEGFA-215ENST00000497139 Q5XG85 94 aa9.51□□□□□ -0.89
VEGFA-215ENST00000497139 PRIMA1Q86XR5 153 aa9.51□□□□□ -0.89
VEGFA-215ENST00000497139 KIR2DL5BQ8NHK3 375 aa9.51□□□□□ -0.89
VEGFA-215ENST00000497139 KALRNO60229 2985 aa9.5□□□□□ -0.89
VEGFA-215ENST00000497139 LAMA5O15230 3695 aa9.5□□□□□ -0.89
VEGFA-215ENST00000497139 ACACAQ13085 2346 aa9.5□□□□□ -0.89
VEGFA-215ENST00000497139 CYSTM1Q9H1C7 97 aa9.5□□□□□ -0.89
VEGFA-215ENST00000497139 MAP1BP46821 2468 aaKnown RBP9.5□□□□□ -0.89
VEGFA-215ENST00000497139 APC2O95996 2303 aa9.49□□□□□ -0.89
VEGFA-215ENST00000497139 K7ENP7 123 aa9.49□□□□□ -0.89
VEGFA-215ENST00000497139 UNQ9165/PRO28630Q6UXU0 137 aa9.49□□□□□ -0.89
VEGFA-215ENST00000497139 NDUFC2O95298 119 aa9.49□□□□□ -0.89
VEGFA-215ENST00000497139 KLRB1Q12918 225 aa9.49□□□□□ -0.89
VEGFA-215ENST00000497139 SPENQ96T58 3664 aaKnown RBP9.48□□□□□ -0.89
VEGFA-215ENST00000497139 IGLV5-39A0A0G2JS06 123 aa9.48□□□□□ -0.89
VEGFA-215ENST00000497139 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.48□□□□□ -0.89
VEGFA-215ENST00000497139 UBE2D4Q9Y2X8 147 aa9.48□□□□□ -0.89
VEGFA-215ENST00000497139 C5orf56Q8N8D9 126 aa9.48□□□□□ -0.89
VEGFA-215ENST00000497139 OBSCN-AS1Q96MR7 158 aa9.48□□□□□ -0.89
VEGFA-215ENST00000497139 SIRPDQ9H106 197 aa9.48□□□□□ -0.89
VEGFA-215ENST00000497139 IGHV1OR15-1A0A075B7D0 117 aa9.47□□□□□ -0.89
VEGFA-215ENST00000497139 OXTP01178 125 aa9.47□□□□□ -0.89
VEGFA-215ENST00000497139 UCNP55089 124 aa9.47□□□□□ -0.89
VEGFA-215ENST00000497139 SYNJ2BPP57105 145 aa9.47□□□□□ -0.89
VEGFA-215ENST00000497139 HIST2H2BCQ6DN03 193 aa9.47□□□□□ -0.89
VEGFA-215ENST00000497139 HIST2H2BDQ6DRA6 164 aa9.47□□□□□ -0.89
VEGFA-215ENST00000497139 A8MZ25 164 aa9.47□□□□□ -0.89
VEGFA-215ENST00000497139 USP17L23D6RBM5 183 aa9.47□□□□□ -0.89
VEGFA-215ENST00000497139 RPL28P46779 137 aaKnown RBP9.47□□□□□ -0.89
VEGFA-215ENST00000497139 USMG5Q96IX5 58 aa9.47□□□□□ -0.89
VEGFA-215ENST00000497139 DSCR8Q96T75 97 aa9.47□□□□□ -0.89
VEGFA-215ENST00000497139 PKDREJQ9NTG1 2253 aa9.47□□□□□ -0.89
VEGFA-215ENST00000497139 WNK2Q9Y3S1 2297 aa9.47□□□□□ -0.89
VEGFA-215ENST00000497139 H3BUA1 57 aa9.47□□□□□ -0.89
VEGFA-215ENST00000497139 C4orf26Q17RF5 130 aa9.47□□□□□ -0.89
VEGFA-215ENST00000497139 TRAV13-2A0A0B4J235 113 aa9.46□□□□□ -0.89
VEGFA-215ENST00000497139 Q8N2B8 174 aa9.46□□□□□ -0.89
VEGFA-215ENST00000497139 RHPN1-AS1Q9BWJ2 59 aa9.46□□□□□ -0.89
VEGFA-215ENST00000497139 MGAQ8IWI9 3026 aa9.46□□□□□ -0.9
VEGFA-215ENST00000497139 CHCHD7Q9BUK0 85 aa9.46□□□□□ -0.9
VEGFA-215ENST00000497139 CDKN2A-AS1Q9UH64 79 aa9.46□□□□□ -0.9
VEGFA-215ENST00000497139 ROS1P08922 2347 aa9.46□□□□□ -0.9
VEGFA-215ENST00000497139 FAM218AQ96MZ4 157 aa9.45□□□□□ -0.9
VEGFA-215ENST00000497139 Q9H8V8 135 aa9.45□□□□□ -0.9
VEGFA-215ENST00000497139 HRCT1Q6UXD1 115 aa9.45□□□□□ -0.9
VEGFA-215ENST00000497139 RNF152Q8N8N0 203 aa9.45□□□□□ -0.9
VEGFA-215ENST00000497139 ATP5EP2Q5VTU8 51 aa9.44□□□□□ -0.9
VEGFA-215ENST00000497139 FAM19A3Q7Z5A8 133 aa9.44□□□□□ -0.9
VEGFA-215ENST00000497139 PIK3CD-AS1Q5SR53 167 aa9.44□□□□□ -0.9
VEGFA-215ENST00000497139 S100A7L2Q5SY68 101 aa9.44□□□□□ -0.9
VEGFA-215ENST00000497139 LINC01561Q8N1V8 128 aa9.44□□□□□ -0.9
VEGFA-215ENST00000497139 K7EMT4 169 aa9.43□□□□□ -0.9
VEGFA-215ENST00000497139 SOSTDC1Q6X4U4 206 aa9.43□□□□□ -0.9
VEGFA-215ENST00000497139 MOB4Q9Y3A3 225 aa9.43□□□□□ -0.9
VEGFA-215ENST00000497139 BOD1L1Q8NFC6 3051 aa9.43□□□□□ -0.9
VEGFA-215ENST00000497139 DMXL2Q8TDJ6 3036 aa9.43□□□□□ -0.9
VEGFA-215ENST00000497139 ABCA4P78363 2273 aa9.43□□□□□ -0.9
VEGFA-215ENST00000497139 IGHG2P01859 326 aa9.43□□□□□ -0.9
VEGFA-215ENST00000497139 PIMREGQ9BSJ6 248 aa9.43□□□□□ -0.9
VEGFA-215ENST00000497139 RNASE13Q5GAN3 156 aaKnown RBP9.42□□□□□ -0.9
VEGFA-215ENST00000497139 Q8NA96 180 aa9.42□□□□□ -0.9
VEGFA-215ENST00000497139 IGF2RP11717 2491 aa9.42□□□□□ -0.9
VEGFA-215ENST00000497139 H0YGX0 51 aa9.42□□□□□ -0.9
VEGFA-215ENST00000497139 TRBV12-3P01733 135 aa9.42□□□□□ -0.9
VEGFA-215ENST00000497139 IGKV3D-7A0A0C4DH55 119 aa9.41□□□□□ -0.9
VEGFA-215ENST00000497139 EPM2AB3EWF7 344 aa9.41□□□□□ -0.9
VEGFA-215ENST00000497139 PSMB8P28062 276 aa9.41□□□□□ -0.9
VEGFA-215ENST00000497139 SAA4P35542 130 aa9.41□□□□□ -0.9
VEGFA-215ENST00000497139 LINC00846Q9NV44 126 aa9.41□□□□□ -0.9
VEGFA-215ENST00000497139 PRO0628Q9UI54 55 aa9.41□□□□□ -0.9
VEGFA-215ENST00000497139 ANKRD11Q6UB99 2663 aaPredicted RBP9.41□□□□□ -0.9
VEGFA-215ENST00000497139 PIEZO1Q92508 2521 aa9.41□□□□□ -0.9
VEGFA-215ENST00000497139 ZNF625Q96I27 306 aaPredicted RBP9.41□□□□□ -0.9
VEGFA-215ENST00000497139 CRPP02741 224 aa9.4□□□□□ -0.9
VEGFA-215ENST00000497139 POLEQ07864 2286 aa9.4□□□□□ -0.9
VEGFA-215ENST00000497139 IGKV3-7A0A075B6H7 116 aa9.4□□□□□ -0.91
VEGFA-215ENST00000497139 Q9HAA7 133 aa9.4□□□□□ -0.91
VEGFA-215ENST00000497139 PIEZO2Q9H5I5 2752 aa9.39□□□□□ -0.91
VEGFA-215ENST00000497139 C14orf132Q9NPU4 83 aa9.39□□□□□ -0.91
VEGFA-215ENST00000497139 BCE1O60756 84 aa9.39□□□□□ -0.91
VEGFA-215ENST00000497139 ZFP36P26651 326 aaKnown RBP9.39□□□□□ -0.91
VEGFA-215ENST00000497139 LINC00467Q9BRT7 94 aa9.39□□□□□ -0.91
VEGFA-215ENST00000497139 SNRPD3P62318 126 aaKnown RBP9.38□□□□□ -0.91
VEGFA-215ENST00000497139 FHL2Q14192 279 aa9.38□□□□□ -0.91
VEGFA-215ENST00000497139 SERP1Q9Y6X1 66 aa9.38□□□□□ -0.91
VEGFA-215ENST00000497139 SMG1Q96Q15 3661 aaKnown RBP9.38□□□□□ -0.91
VEGFA-215ENST00000497139 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.38□□□□□ -0.91
VEGFA-215ENST00000497139 A0A087WVE0 104 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms