RNA–Protein interactions for RNA: ENST00000496427.5

CHCHD3-206, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5

Gene CHCHD3, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-206ENST00000496427 GFRA4Q9GZZ7 299 aa4.34□□□□□ -1.71
CHCHD3-206ENST00000496427 MED28Q9H204 178 aa4.34□□□□□ -1.71
CHCHD3-206ENST00000496427 TMEM167BQ9NRX6 74 aa4.34□□□□□ -1.71
CHCHD3-206ENST00000496427 PLAC8Q9NZF1 115 aa4.34□□□□□ -1.71
CHCHD3-206ENST00000496427 A0A0J9YXV3 536 aa4.33□□□□□ -1.72
CHCHD3-206ENST00000496427 INMT-MINDY4F8WBC2 141 aa4.33□□□□□ -1.72
CHCHD3-206ENST00000496427 CXorf1O96002 111 aa4.33□□□□□ -1.72
CHCHD3-206ENST00000496427 PET100P0DJ07 73 aa4.33□□□□□ -1.72
CHCHD3-206ENST00000496427 SSTP61278 116 aa4.33□□□□□ -1.72
CHCHD3-206ENST00000496427 IFITM2Q01629 132 aa4.33□□□□□ -1.72
CHCHD3-206ENST00000496427 REG3AQ06141 175 aa4.33□□□□□ -1.72
CHCHD3-206ENST00000496427 ZNF726P1Q15940 193 aa4.33□□□□□ -1.72
CHCHD3-206ENST00000496427 PRR27Q6MZM9 219 aa4.33□□□□□ -1.72
CHCHD3-206ENST00000496427 C7orf33Q8WU49 177 aa4.33□□□□□ -1.72
CHCHD3-206ENST00000496427 GTSF1Q8WW33 167 aa4.33□□□□□ -1.72
CHCHD3-206ENST00000496427 RNF185Q96GF1 192 aa4.33□□□□□ -1.72
CHCHD3-206ENST00000496427 DERL1Q9BUN8 251 aa4.33□□□□□ -1.72
CHCHD3-206ENST00000496427 IGLV4-60A0A075B6I1 120 aa4.32□□□□□ -1.72
CHCHD3-206ENST00000496427 TRBV6-1A0A0K0K1D8 114 aa4.32□□□□□ -1.72
CHCHD3-206ENST00000496427 A0A1W2PRE2 83 aa4.32□□□□□ -1.72
CHCHD3-206ENST00000496427 SSNA1O43805 119 aa4.32□□□□□ -1.72
CHCHD3-206ENST00000496427 KRTAP10-8P60410 259 aa4.32□□□□□ -1.72
CHCHD3-206ENST00000496427 RAB4BP61018 213 aa4.32□□□□□ -1.72
CHCHD3-206ENST00000496427 EIF5AP63241 154 aaKnown RBP4.32□□□□□ -1.72
CHCHD3-206ENST00000496427 COX6A2Q02221 97 aa4.32□□□□□ -1.72
CHCHD3-206ENST00000496427 HIGD2BQ4VC39 106 aa4.32□□□□□ -1.72
CHCHD3-206ENST00000496427 FAM162BQ5T6X4 162 aa4.32□□□□□ -1.72
CHCHD3-206ENST00000496427 EIF5AL1Q6IS14 154 aaKnown RBP4.32□□□□□ -1.72
CHCHD3-206ENST00000496427 C15orf56Q8N910 161 aa4.32□□□□□ -1.72
CHCHD3-206ENST00000496427 C20orf203Q8NBC4 194 aa4.32□□□□□ -1.72
CHCHD3-206ENST00000496427 INO80EQ8NBZ0 244 aaPredicted RBP4.32□□□□□ -1.72
CHCHD3-206ENST00000496427 PRSS3P2Q8NHM4 247 aa4.32□□□□□ -1.72
CHCHD3-206ENST00000496427 TRBV25-1A0A075B6N4 114 aa4.31□□□□□ -1.72
CHCHD3-206ENST00000496427 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.31□□□□□ -1.72
CHCHD3-206ENST00000496427 FAM74A7A6NL05 159 aa4.31□□□□□ -1.72
CHCHD3-206ENST00000496427 F5H697 171 aa4.31□□□□□ -1.72
CHCHD3-206ENST00000496427 GIPP09681 153 aaPredicted RBP4.31□□□□□ -1.72
CHCHD3-206ENST00000496427 PKIAP61925 76 aa4.31□□□□□ -1.72
CHCHD3-206ENST00000496427 UBE2G1P62253 170 aa4.31□□□□□ -1.72
CHCHD3-206ENST00000496427 STPG4Q8N801 248 aa4.31□□□□□ -1.72
CHCHD3-206ENST00000496427 TCEAL7Q9BRU2 100 aa4.31□□□□□ -1.72
CHCHD3-206ENST00000496427 PSMG3Q9BT73 122 aaPredicted RBP4.31□□□□□ -1.72
CHCHD3-206ENST00000496427 ACTR3CQ9C0K3 210 aaPredicted RBP4.31□□□□□ -1.72
CHCHD3-206ENST00000496427 VAX2Q9UIW0 290 aa4.31□□□□□ -1.72
CHCHD3-206ENST00000496427 A0A096LNI7 61 aa4.3□□□□□ -1.72
CHCHD3-206ENST00000496427 IGHV1-24A0A0C4DH33 117 aa4.3□□□□□ -1.72
CHCHD3-206ENST00000496427 IGKV3OR2-268A0A0C4DH90 116 aa4.3□□□□□ -1.72
CHCHD3-206ENST00000496427 RAB19A4D1S5 217 aa4.3□□□□□ -1.72
CHCHD3-206ENST00000496427 MGPP08493 103 aa4.3□□□□□ -1.72
CHCHD3-206ENST00000496427 COX8CQ7Z4L0 72 aa4.3□□□□□ -1.72
CHCHD3-206ENST00000496427 SLC7A5P1Q8MH63 180 aa4.3□□□□□ -1.72
CHCHD3-206ENST00000496427 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.3□□□□□ -1.72
CHCHD3-206ENST00000496427 FMC1Q96HJ9 113 aa4.3□□□□□ -1.72
CHCHD3-206ENST00000496427 ZNF471Q9BX82 626 aaPredicted RBP4.3□□□□□ -1.72
CHCHD3-206ENST00000496427 VCX2Q9H322 139 aa4.3□□□□□ -1.72
CHCHD3-206ENST00000496427 SMDT1Q9H4I9 107 aa4.3□□□□□ -1.72
CHCHD3-206ENST00000496427 A0A0A0MQY5 61 aa4.29□□□□□ -1.72
CHCHD3-206ENST00000496427 CTXND1A0A1B0GTU2 59 aa4.29□□□□□ -1.72
CHCHD3-206ENST00000496427 GAGE12HA6NDE8 117 aa4.29□□□□□ -1.72
CHCHD3-206ENST00000496427 NDUFS6O75380 124 aaKnown RBP4.29□□□□□ -1.72
CHCHD3-206ENST00000496427 LTAP01374 205 aa4.29□□□□□ -1.72
CHCHD3-206ENST00000496427 MBP02144 154 aa4.29□□□□□ -1.72
CHCHD3-206ENST00000496427 AKR1C3P42330 323 aa4.29□□□□□ -1.72
CHCHD3-206ENST00000496427 ZNF345Q14585 488 aa4.29□□□□□ -1.72
CHCHD3-206ENST00000496427 IQCJQ1A5X6 159 aa4.29□□□□□ -1.72
CHCHD3-206ENST00000496427 TMEM97Q5BJF2 176 aa4.29□□□□□ -1.72
CHCHD3-206ENST00000496427 SPANXN1Q5VSR9 72 aa4.29□□□□□ -1.72
CHCHD3-206ENST00000496427 REG3GQ6UW15 175 aa4.29□□□□□ -1.72
CHCHD3-206ENST00000496427 HIST1H2BAQ96A08 127 aa4.29□□□□□ -1.72
CHCHD3-206ENST00000496427 TNFSF18Q9UNG2 199 aa4.29□□□□□ -1.72
CHCHD3-206ENST00000496427 ZFP30Q9Y2G7 519 aa4.29□□□□□ -1.72
CHCHD3-206ENST00000496427 MUC2Q02817 5179 aa4.28□□□□□ -1.72
CHCHD3-206ENST00000496427 TRAV8-4A0A0B4J246 113 aa4.28□□□□□ -1.72
CHCHD3-206ENST00000496427 SNAI2O43623 268 aa4.28□□□□□ -1.72
CHCHD3-206ENST00000496427 P01737 135 aa4.28□□□□□ -1.72
CHCHD3-206ENST00000496427 S100A9P06702 114 aaKnown RBP4.28□□□□□ -1.72
CHCHD3-206ENST00000496427 RPS10P46783 165 aaKnown RBP4.28□□□□□ -1.72
CHCHD3-206ENST00000496427 NKX2-5P52952 324 aaPredicted RBP4.28□□□□□ -1.72
CHCHD3-206ENST00000496427 SERF2P84101 59 aa4.28□□□□□ -1.72
CHCHD3-206ENST00000496427 RPL7L1Q6DKI1 246 aaKnown RBP4.28□□□□□ -1.72
CHCHD3-206ENST00000496427 SUMO4Q6EEV6 95 aa4.28□□□□□ -1.72
CHCHD3-206ENST00000496427 SPINK6Q6UWN8 80 aa4.28□□□□□ -1.72
CHCHD3-206ENST00000496427 AQP10Q96PS8 301 aa4.28□□□□□ -1.72
CHCHD3-206ENST00000496427 FAT4Q6V0I7 4981 aa4.28□□□□□ -1.72
CHCHD3-206ENST00000496427 MAP1LC3B2A6NCE7 125 aa4.27□□□□□ -1.73
CHCHD3-206ENST00000496427 H0Y8G0 127 aa4.27□□□□□ -1.73
CHCHD3-206ENST00000496427 S100A8P05109 93 aa4.27□□□□□ -1.73
CHCHD3-206ENST00000496427 SULT1A2P50226 295 aa4.27□□□□□ -1.73
CHCHD3-206ENST00000496427 SRSF9Q13242 221 aaKnown RBP eCLIP4.27□□□□□ -1.73
CHCHD3-206ENST00000496427 Q5BKY6 102 aa4.27□□□□□ -1.73
CHCHD3-206ENST00000496427 SVBPQ8N300 66 aa4.27□□□□□ -1.73
CHCHD3-206ENST00000496427 C9orf62Q8N4C0 152 aa4.27□□□□□ -1.73
CHCHD3-206ENST00000496427 LINC00526Q96FQ7 95 aa4.27□□□□□ -1.73
CHCHD3-206ENST00000496427 AP1S3Q96PC3 154 aa4.27□□□□□ -1.73
CHCHD3-206ENST00000496427 TMEM243Q9BU79 118 aa4.27□□□□□ -1.73
CHCHD3-206ENST00000496427 MAP1LC3BQ9GZQ8 125 aa4.27□□□□□ -1.73
CHCHD3-206ENST00000496427 ALG5Q9Y673 324 aa4.27□□□□□ -1.73
CHCHD3-206ENST00000496427 A0A1B0GUV1 79 aa4.26□□□□□ -1.73
CHCHD3-206ENST00000496427 LOC105371267A0A1B0GV96 52 aa4.26□□□□□ -1.73
CHCHD3-206ENST00000496427 TMEM218A2RU14 115 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms