RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 MIAQ16674 131 aa6.78□□□□□ -1.32
HPS4-217ENST00000496385 FAM222AQ5U5X8 452 aa6.78□□□□□ -1.32
HPS4-217ENST00000496385 TRBV27A0A0K0K1C4 114 aa6.78□□□□□ -1.32
HPS4-217ENST00000496385 NBR2O15453 112 aa6.78□□□□□ -1.32
HPS4-217ENST00000496385 MGPP08493 103 aa6.78□□□□□ -1.32
HPS4-217ENST00000496385 S100A4P26447 101 aaKnown RBP6.78□□□□□ -1.32
HPS4-217ENST00000496385 TMEM61Q8N0U2 210 aa6.78□□□□□ -1.32
HPS4-217ENST00000496385 NUP37Q8NFH4 326 aa6.78□□□□□ -1.32
HPS4-217ENST00000496385 CLEC2BQ92478 149 aa6.78□□□□□ -1.32
HPS4-217ENST00000496385 Q5XG85 94 aa6.77□□□□□ -1.33
HPS4-217ENST00000496385 LINC00477Q96M19 166 aa6.77□□□□□ -1.33
HPS4-217ENST00000496385 TRAV8-3A0A0A6YYJ7 113 aa6.77□□□□□ -1.33
HPS4-217ENST00000496385 TRBV7-1A0A0A6YYK4 115 aa6.77□□□□□ -1.33
HPS4-217ENST00000496385 NSUN5P1Q3KNT7 163 aa6.77□□□□□ -1.33
HPS4-217ENST00000496385 MAST4O15021 2626 aa6.77□□□□□ -1.33
HPS4-217ENST00000496385 ABCA1O95477 2261 aa6.76□□□□□ -1.33
HPS4-217ENST00000496385 LY6LH3BQJ8 138 aa6.76□□□□□ -1.33
HPS4-217ENST00000496385 UPK3BQ9BT76 320 aa6.76□□□□□ -1.33
HPS4-217ENST00000496385 MYO9AB2RTY4 2548 aa6.76□□□□□ -1.33
HPS4-217ENST00000496385 TRAV13-1A0A0B4J241 112 aa6.76□□□□□ -1.33
HPS4-217ENST00000496385 LY6HO94772 140 aa6.76□□□□□ -1.33
HPS4-217ENST00000496385 RNF182Q8N6D2 247 aa6.76□□□□□ -1.33
HPS4-217ENST00000496385 PRO0628Q9UI54 55 aa6.76□□□□□ -1.33
HPS4-217ENST00000496385 KIF25-AS1Q9Y6Z4 181 aa6.76□□□□□ -1.33
HPS4-217ENST00000496385 MALRD1Q5VYJ5 2156 aa6.76□□□□□ -1.33
HPS4-217ENST00000496385 COX7A2LO14548 114 aa6.75□□□□□ -1.33
HPS4-217ENST00000496385 PRSS2P07478 247 aa6.75□□□□□ -1.33
HPS4-217ENST00000496385 MALP21145 153 aa6.75□□□□□ -1.33
HPS4-217ENST00000496385 OTOGQ6ZRI0 2925 aa6.75□□□□□ -1.33
HPS4-217ENST00000496385 TRAV41A0A0B4J266 112 aa6.75□□□□□ -1.33
HPS4-217ENST00000496385 IGHV3-30-3P0DP02 117 aa6.75□□□□□ -1.33
HPS4-217ENST00000496385 LINC00315P59091 139 aa6.75□□□□□ -1.33
HPS4-217ENST00000496385 RPL39P62891 51 aaKnown RBP6.75□□□□□ -1.33
HPS4-217ENST00000496385 C4orf26Q17RF5 130 aa6.74□□□□□ -1.33
HPS4-217ENST00000496385 KLK9Q2XQG4 91 aa6.74□□□□□ -1.33
HPS4-217ENST00000496385 LYPD2Q6UXB3 125 aa6.74□□□□□ -1.33
HPS4-217ENST00000496385 EEF1AKMT3Q96AZ1 226 aa6.74□□□□□ -1.33
HPS4-217ENST00000496385 CCL19Q99731 98 aa6.74□□□□□ -1.33
HPS4-217ENST00000496385 KLK9Q9UKQ9 250 aa6.74□□□□□ -1.33
HPS4-217ENST00000496385 CREBBPQ92793 2442 aa6.74□□□□□ -1.33
HPS4-217ENST00000496385 PRRC2AP48634 2157 aaKnown RBP6.74□□□□□ -1.33
HPS4-217ENST00000496385 NDUFC2O95298 119 aa6.74□□□□□ -1.33
HPS4-217ENST00000496385 ZNF415Q09FC8 603 aa6.74□□□□□ -1.33
HPS4-217ENST00000496385 COPS9Q8WXC6 57 aa6.74□□□□□ -1.33
HPS4-217ENST00000496385 S4R3C0 116 aa6.74□□□□□ -1.33
HPS4-217ENST00000496385 PF4P02776 101 aa6.74□□□□□ -1.33
HPS4-217ENST00000496385 RNASE4P34096 147 aaKnown RBP6.74□□□□□ -1.33
HPS4-217ENST00000496385 Q6JHZ5 121 aa6.74□□□□□ -1.33
HPS4-217ENST00000496385 HRCT1Q6UXD1 115 aa6.74□□□□□ -1.33
HPS4-217ENST00000496385 C9orf139Q6ZV77 190 aa6.74□□□□□ -1.33
HPS4-217ENST00000496385 JPT2Q9H910 190 aa6.74□□□□□ -1.33
HPS4-217ENST00000496385 AKAP9Q99996 3911 aa6.73□□□□□ -1.33
HPS4-217ENST00000496385 IGHV1-58A0A0C4DH39 117 aa6.73□□□□□ -1.33
HPS4-217ENST00000496385 DAZ2Q13117 558 aaKnown RBP6.73□□□□□ -1.33
HPS4-217ENST00000496385 DAZ4Q86SG3 579 aaKnown RBP6.73□□□□□ -1.33
HPS4-217ENST00000496385 APRG1Q8IVJ8 170 aa6.73□□□□□ -1.33
HPS4-217ENST00000496385 DAZ1Q9NQZ3 744 aaKnown RBP6.73□□□□□ -1.33
HPS4-217ENST00000496385 DAZ3Q9NR90 486 aaKnown RBP6.73□□□□□ -1.33
HPS4-217ENST00000496385 PYGO1Q9Y3Y4 419 aa6.73□□□□□ -1.33
HPS4-217ENST00000496385 ITPR3Q14573 2671 aa6.73□□□□□ -1.33
HPS4-217ENST00000496385 ZNF469Q96JG9 3925 aaPredicted RBP6.73□□□□□ -1.33
HPS4-217ENST00000496385 ZFAND2AQ8N6M9 145 aa6.73□□□□□ -1.33
HPS4-217ENST00000496385 ZANQ9Y493 2812 aa6.72□□□□□ -1.33
HPS4-217ENST00000496385 SPRY2O43597 315 aa6.72□□□□□ -1.33
HPS4-217ENST00000496385 MRPS36P82909 103 aaKnown RBP6.72□□□□□ -1.33
HPS4-217ENST00000496385 FAM19A4Q96LR4 140 aa6.72□□□□□ -1.33
HPS4-217ENST00000496385 NDUFA12Q9UI09 145 aa6.72□□□□□ -1.33
HPS4-217ENST00000496385 LYNX1G3V0Z9 82 aa6.72□□□□□ -1.33
HPS4-217ENST00000496385 OXTP01178 125 aa6.72□□□□□ -1.33
HPS4-217ENST00000496385 LYNX1P0DP58 116 aa6.72□□□□□ -1.33
HPS4-217ENST00000496385 RNASE3P12724 160 aaKnown RBP6.72□□□□□ -1.33
HPS4-217ENST00000496385 PSMB8P28062 276 aa6.72□□□□□ -1.33
HPS4-217ENST00000496385 TIRAPP58753 221 aa6.72□□□□□ -1.33
HPS4-217ENST00000496385 PRR9Q5T870 116 aa6.72□□□□□ -1.33
HPS4-217ENST00000496385 SUMO4Q6EEV6 95 aa6.72□□□□□ -1.33
HPS4-217ENST00000496385 BAALC-AS2P0C853 105 aa6.71□□□□□ -1.33
HPS4-217ENST00000496385 BEAN1Q3B7T3 259 aa6.71□□□□□ -1.33
HPS4-217ENST00000496385 ADAMTSL4-AS1Q5T5F5 129 aa6.71□□□□□ -1.33
HPS4-217ENST00000496385 C20orf203Q8NBC4 194 aa6.71□□□□□ -1.33
HPS4-217ENST00000496385 U3KQE9 123 aa6.71□□□□□ -1.33
HPS4-217ENST00000496385 SVEP1Q4LDE5 3571 aa6.71□□□□□ -1.33
HPS4-217ENST00000496385 DSCR8Q96T75 97 aa6.71□□□□□ -1.34
HPS4-217ENST00000496385 ACANP16112 2415 aa6.7□□□□□ -1.34
HPS4-217ENST00000496385 A0A0J9YXV3 536 aa6.7□□□□□ -1.34
HPS4-217ENST00000496385 EPM2AB3EWF7 344 aa6.7□□□□□ -1.34
HPS4-217ENST00000496385 C11orf71Q6IPW1 123 aa6.7□□□□□ -1.34
HPS4-217ENST00000496385 CCL17Q92583 94 aa6.7□□□□□ -1.34
HPS4-217ENST00000496385 FLNAP21333 2647 aaKnown RBP6.7□□□□□ -1.34
HPS4-217ENST00000496385 IGLV4-3A0A075B6K6 122 aa6.7□□□□□ -1.34
HPS4-217ENST00000496385 IGHV3OR16-10A0A075B7F0 116 aa6.7□□□□□ -1.34
HPS4-217ENST00000496385 CLPSL1A2RUU4 121 aa6.7□□□□□ -1.34
HPS4-217ENST00000496385 SYNJ2BPP57105 145 aa6.7□□□□□ -1.34
HPS4-217ENST00000496385 CIRBPQ14011 172 aaKnown RBP6.7□□□□□ -1.34
HPS4-217ENST00000496385 OVOL2Q9BRP0 275 aa6.7□□□□□ -1.34
HPS4-217ENST00000496385 DPM3Q9P2X0 92 aa6.7□□□□□ -1.34
HPS4-217ENST00000496385 MED13LQ71F56 2210 aa6.7□□□□□ -1.34
HPS4-217ENST00000496385 VSIG2Q96IQ7 327 aa6.69□□□□□ -1.34
HPS4-217ENST00000496385 C16orf92Q96LL3 132 aa6.69□□□□□ -1.34
HPS4-217ENST00000496385 CYSTM1Q9H1C7 97 aa6.69□□□□□ -1.34
HPS4-217ENST00000496385 IGHV3-64A0A075B6Q5 118 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms