RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 GCSHP23434 173 aa9.65□□□□□ -0.86
CXCL12-208ENST00000496375 UBE2D3P61077 147 aa9.65□□□□□ -0.86
CXCL12-208ENST00000496375 UBE2D2P62837 147 aa9.65□□□□□ -0.86
CXCL12-208ENST00000496375 GAGE1Q13065 139 aa9.65□□□□□ -0.86
CXCL12-208ENST00000496375 GAGE4Q13068 117 aa9.65□□□□□ -0.86
CXCL12-208ENST00000496375 GAGE5Q13069 117 aa9.65□□□□□ -0.86
CXCL12-208ENST00000496375 TWIST1Q15672 202 aa9.65□□□□□ -0.86
CXCL12-208ENST00000496375 COX19Q49B96 90 aa9.65□□□□□ -0.86
CXCL12-208ENST00000496375 GAGE13Q4V321 117 aa9.65□□□□□ -0.86
CXCL12-208ENST00000496375 LINC01556Q5JQF7 62 aa9.65□□□□□ -0.86
CXCL12-208ENST00000496375 NEXN-AS1Q8NBZ9 246 aa9.65□□□□□ -0.86
CXCL12-208ENST00000496375 FRZBQ92765 325 aa9.65□□□□□ -0.86
CXCL12-208ENST00000496375 PGLYRP4Q96LB8 373 aa9.65□□□□□ -0.86
CXCL12-208ENST00000496375 TRAV8-6A0A0B4J262 113 aa9.64□□□□□ -0.87
CXCL12-208ENST00000496375 A0A1B0GUT8 65 aa9.64□□□□□ -0.87
CXCL12-208ENST00000496375 INAFM2P0DMQ5 153 aa9.64□□□□□ -0.87
CXCL12-208ENST00000496375 SSTP61278 116 aa9.64□□□□□ -0.87
CXCL12-208ENST00000496375 RPL36AP83881 106 aaKnown RBP9.64□□□□□ -0.87
CXCL12-208ENST00000496375 OR10J3Q5JRS4 329 aa9.64□□□□□ -0.87
CXCL12-208ENST00000496375 LELP1Q5T871 98 aa9.64□□□□□ -0.87
CXCL12-208ENST00000496375 Q5VSD8 79 aa9.64□□□□□ -0.87
CXCL12-208ENST00000496375 NUP35Q8NFH5 326 aa9.64□□□□□ -0.87
CXCL12-208ENST00000496375 RPL36ALQ969Q0 106 aaKnown RBP9.64□□□□□ -0.87
CXCL12-208ENST00000496375 NAT8BQ9UHF3 227 aa9.64□□□□□ -0.87
CXCL12-208ENST00000496375 LRCOL1A6NCL2 159 aa9.63□□□□□ -0.87
CXCL12-208ENST00000496375 H7C1H1 209 aa9.63□□□□□ -0.87
CXCL12-208ENST00000496375 SMIM6P0DI80 62 aa9.63□□□□□ -0.87
CXCL12-208ENST00000496375 SUMO4Q6EEV6 95 aa9.63□□□□□ -0.87
CXCL12-208ENST00000496375 DNAJC30Q96LL9 226 aa9.63□□□□□ -0.87
CXCL12-208ENST00000496375 IBA57-AS1B1ANH7 110 aa9.62□□□□□ -0.87
CXCL12-208ENST00000496375 F5H697 171 aa9.62□□□□□ -0.87
CXCL12-208ENST00000496375 S100A2P29034 98 aa9.62□□□□□ -0.87
CXCL12-208ENST00000496375 COA6Q5JTJ3 125 aaKnown RBP9.62□□□□□ -0.87
CXCL12-208ENST00000496375 BORCS7Q96B45 105 aa9.62□□□□□ -0.87
CXCL12-208ENST00000496375 C12orf57Q99622 126 aa9.62□□□□□ -0.87
CXCL12-208ENST00000496375 TMEM191AQ9H0A3 160 aa9.62□□□□□ -0.87
CXCL12-208ENST00000496375 Q9HAA7 133 aa9.62□□□□□ -0.87
CXCL12-208ENST00000496375 IGLV5-52A0A0A0MRZ9 124 aa9.61□□□□□ -0.87
CXCL12-208ENST00000496375 IGHV3-30P01768 117 aa9.61□□□□□ -0.87
CXCL12-208ENST00000496375 IGHV3-33P01772 117 aa9.61□□□□□ -0.87
CXCL12-208ENST00000496375 SMR3BP02814 79 aaPredicted RBP9.61□□□□□ -0.87
CXCL12-208ENST00000496375 MGPP08493 103 aa9.61□□□□□ -0.87
CXCL12-208ENST00000496375 IGHV3-30-3P0DP02 117 aa9.61□□□□□ -0.87
CXCL12-208ENST00000496375 IGHV3-30-5P0DP03 117 aa9.61□□□□□ -0.87
CXCL12-208ENST00000496375 HAMPP81172 84 aa9.61□□□□□ -0.87
CXCL12-208ENST00000496375 RASL11AQ6T310 242 aa9.61□□□□□ -0.87
CXCL12-208ENST00000496375 SMIM15Q7Z3B0 74 aa9.61□□□□□ -0.87
CXCL12-208ENST00000496375 TRAPPC1Q9Y5R8 145 aa9.61□□□□□ -0.87
CXCL12-208ENST00000496375 RIGQ13278 110 aa9.6□□□□□ -0.87
CXCL12-208ENST00000496375 NTN5Q8WTR8 489 aaPredicted RBP9.6□□□□□ -0.87
CXCL12-208ENST00000496375 DMBT1Q9UGM3 2413 aaPredicted RBP9.59□□□□□ -0.87
CXCL12-208ENST00000496375 A0A1B0GW15 77 aa9.59□□□□□ -0.87
CXCL12-208ENST00000496375 DAZ4Q86SG3 579 aaKnown RBP9.59□□□□□ -0.87
CXCL12-208ENST00000496375 HIST3H2BBQ8N257 126 aa9.59□□□□□ -0.87
CXCL12-208ENST00000496375 Q8N814 137 aa9.59□□□□□ -0.87
CXCL12-208ENST00000496375 GATD1Q8NB37 220 aa9.59□□□□□ -0.87
CXCL12-208ENST00000496375 NIT2Q9NQR4 276 aa9.59□□□□□ -0.87
CXCL12-208ENST00000496375 DAZ3Q9NR90 486 aaKnown RBP9.59□□□□□ -0.87
CXCL12-208ENST00000496375 SRRM2Q9UQ35 2752 aaKnown RBP9.59□□□□□ -0.87
CXCL12-208ENST00000496375 A0A1B0GXF2 115 aa9.58□□□□□ -0.88
CXCL12-208ENST00000496375 MT-ND6P03923 174 aa9.58□□□□□ -0.88
CXCL12-208ENST00000496375 TMEM97Q5BJF2 176 aa9.58□□□□□ -0.88
CXCL12-208ENST00000496375 RNF185Q96GF1 192 aa9.58□□□□□ -0.88
CXCL12-208ENST00000496375 GNB1LQ9BYB4 327 aa9.58□□□□□ -0.88
CXCL12-208ENST00000496375 TRBV6-8A0A0A6YYG3 113 aa9.57□□□□□ -0.88
CXCL12-208ENST00000496375 S100A12P80511 92 aa9.57□□□□□ -0.88
CXCL12-208ENST00000496375 LAGE3Q14657 143 aa9.57□□□□□ -0.88
CXCL12-208ENST00000496375 ATP5L2Q7Z4Y8 100 aa9.57□□□□□ -0.88
CXCL12-208ENST00000496375 TMEM70Q9BUB7 260 aa9.57□□□□□ -0.88
CXCL12-208ENST00000496375 TRBV6-5A0A0K0K1A5 114 aa9.56□□□□□ -0.88
CXCL12-208ENST00000496375 FAM229AH3BQW9 127 aa9.56□□□□□ -0.88
CXCL12-208ENST00000496375 RAB4AP20338 218 aa9.56□□□□□ -0.88
CXCL12-208ENST00000496375 Q8N3U1 123 aa9.56□□□□□ -0.88
CXCL12-208ENST00000496375 MRAP2Q96G30 205 aa9.56□□□□□ -0.88
CXCL12-208ENST00000496375 CHCHD7Q9BUK0 85 aa9.56□□□□□ -0.88
CXCL12-208ENST00000496375 FLG2Q5D862 2391 aaPredicted RBP9.56□□□□□ -0.88
CXCL12-208ENST00000496375 TRAV26-2A0A0B4J265 109 aa9.55□□□□□ -0.88
CXCL12-208ENST00000496375 NTM-AS1Q6ZSK4 140 aa9.55□□□□□ -0.88
CXCL12-208ENST00000496375 TM2D2Q9BX73 214 aa9.55□□□□□ -0.88
CXCL12-208ENST00000496375 IFITM10A6NMD0 228 aa9.54□□□□□ -0.88
CXCL12-208ENST00000496375 HBBP68871 147 aa9.54□□□□□ -0.88
CXCL12-208ENST00000496375 WFDC2Q14508 124 aa9.54□□□□□ -0.88
CXCL12-208ENST00000496375 IQCJQ1A5X6 159 aa9.54□□□□□ -0.88
CXCL12-208ENST00000496375 FAM104BQ5XKR9 115 aa9.54□□□□□ -0.88
CXCL12-208ENST00000496375 NIT1Q86X76 327 aa9.54□□□□□ -0.88
CXCL12-208ENST00000496375 AMN1Q8IY45 258 aa9.54□□□□□ -0.88
CXCL12-208ENST00000496375 MRPL18Q9H0U6 180 aaKnown RBP9.54□□□□□ -0.88
CXCL12-208ENST00000496375 FAM30AQ9NZY2 134 aa9.54□□□□□ -0.88
CXCL12-208ENST00000496375 HLA-DQA1P01909 254 aa9.53□□□□□ -0.88
CXCL12-208ENST00000496375 OR10D4PQ8NGN7 298 aa9.53□□□□□ -0.88
CXCL12-208ENST00000496375 TMEM18Q96B42 140 aa9.53□□□□□ -0.88
CXCL12-208ENST00000496375 TRAV8-3A0A0A6YYJ7 113 aa9.52□□□□□ -0.89
CXCL12-208ENST00000496375 FABP4P15090 132 aa9.52□□□□□ -0.89
CXCL12-208ENST00000496375 PKIAP61925 76 aa9.52□□□□□ -0.89
CXCL12-208ENST00000496375 RPL39LQ96EH5 51 aaKnown RBP9.52□□□□□ -0.89
CXCL12-208ENST00000496375 HIST1H2BLQ99880 126 aa9.52□□□□□ -0.89
CXCL12-208ENST00000496375 LECT2O14960 151 aa9.51□□□□□ -0.89
CXCL12-208ENST00000496375 GAS8-AS1O95177 125 aa9.51□□□□□ -0.89
CXCL12-208ENST00000496375 PPP1R17O96001 155 aa9.51□□□□□ -0.89
CXCL12-208ENST00000496375 CAMPP49913 170 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms