RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 RBMY1EA6NEQ0 496 aaKnown RBP9.53□□□□□ -0.88
PTPN7-217ENST00000495688 RBMY1DP0C7P1 496 aaKnown RBP9.53□□□□□ -0.88
PTPN7-217ENST00000495688 Q6ZSN1 163 aa9.53□□□□□ -0.88
PTPN7-217ENST00000495688 ZNF702PQ9H963 129 aa9.53□□□□□ -0.88
PTPN7-217ENST00000495688 JMJD1CQ15652 2540 aa9.53□□□□□ -0.88
PTPN7-217ENST00000495688 NBPF19A0A087WUL8 3843 aa9.52□□□□□ -0.88
PTPN7-217ENST00000495688 A0A096LNT2 108 aa9.52□□□□□ -0.88
PTPN7-217ENST00000495688 TRAV8-3A0A0A6YYJ7 113 aa9.52□□□□□ -0.88
PTPN7-217ENST00000495688 SCGB1C2P0DMR2 95 aa9.52□□□□□ -0.88
PTPN7-217ENST00000495688 MUSTN1Q8IVN3 82 aa9.52□□□□□ -0.88
PTPN7-217ENST00000495688 CARD19Q96LW7 228 aa9.52□□□□□ -0.88
PTPN7-217ENST00000495688 VPREB3Q9UKI3 123 aa9.52□□□□□ -0.88
PTPN7-217ENST00000495688 TRGV11A0A075B6L2 103 aa9.52□□□□□ -0.89
PTPN7-217ENST00000495688 A8MZ25 164 aa9.51□□□□□ -0.89
PTPN7-217ENST00000495688 CD28P10747 220 aa9.51□□□□□ -0.89
PTPN7-217ENST00000495688 USP24Q9UPU5 2620 aa9.51□□□□□ -0.89
PTPN7-217ENST00000495688 TMEM89A2RUT3 159 aa9.51□□□□□ -0.89
PTPN7-217ENST00000495688 UBE2E2Q96LR5 201 aa9.51□□□□□ -0.89
PTPN7-217ENST00000495688 CDIP1Q9H305 208 aa9.51□□□□□ -0.89
PTPN7-217ENST00000495688 IGHV3-30-3P0DP02 117 aa9.5□□□□□ -0.89
PTPN7-217ENST00000495688 ELANEP08246 267 aa9.5□□□□□ -0.89
PTPN7-217ENST00000495688 APCP25054 2843 aa9.5□□□□□ -0.89
PTPN7-217ENST00000495688 CCDC168Q8NDH2 2452 aa9.5□□□□□ -0.89
PTPN7-217ENST00000495688 A0A0J9YXY3 114 aa9.49□□□□□ -0.89
PTPN7-217ENST00000495688 H3BMM0 161 aa9.49□□□□□ -0.89
PTPN7-217ENST00000495688 IGHV3-33P01772 117 aa9.49□□□□□ -0.89
PTPN7-217ENST00000495688 TMEM263Q8WUH6 116 aaKnown RBP9.49□□□□□ -0.89
PTPN7-217ENST00000495688 UBR5O95071 2799 aaPredicted RBP9.49□□□□□ -0.89
PTPN7-217ENST00000495688 IGHV3-38A0A0C4DH36 116 aa9.49□□□□□ -0.89
PTPN7-217ENST00000495688 TMEM61Q8N0U2 210 aa9.49□□□□□ -0.89
PTPN7-217ENST00000495688 ATP6V0E2Q8NHE4 81 aa9.49□□□□□ -0.89
PTPN7-217ENST00000495688 SETXQ7Z333 2677 aaKnown RBP9.49□□□□□ -0.89
PTPN7-217ENST00000495688 LYRM7Q5U5X0 104 aa9.49□□□□□ -0.89
PTPN7-217ENST00000495688 TEN1Q86WV5 123 aa9.49□□□□□ -0.89
PTPN7-217ENST00000495688 TNFRSF18Q9Y5U5 241 aa9.49□□□□□ -0.89
PTPN7-217ENST00000495688 TRBV20-1A0A075B6N2 111 aa9.48□□□□□ -0.89
PTPN7-217ENST00000495688 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.48□□□□□ -0.89
PTPN7-217ENST00000495688 IGKV2-29A2NJV5 120 aaPredicted RBP9.48□□□□□ -0.89
PTPN7-217ENST00000495688 Q6YL49 198 aa9.48□□□□□ -0.89
PTPN7-217ENST00000495688 TIMM21Q9BVV7 248 aa9.48□□□□□ -0.89
PTPN7-217ENST00000495688 DSCR9P59020 149 aa9.48□□□□□ -0.89
PTPN7-217ENST00000495688 ANKRD29Q8N6D5 301 aa9.48□□□□□ -0.89
PTPN7-217ENST00000495688 RNF152Q8N8N0 203 aa9.48□□□□□ -0.89
PTPN7-217ENST00000495688 A8MWV9 139 aa9.47□□□□□ -0.89
PTPN7-217ENST00000495688 PRSS2P07478 247 aa9.47□□□□□ -0.89
PTPN7-217ENST00000495688 SCGB1A1P11684 91 aa9.47□□□□□ -0.89
PTPN7-217ENST00000495688 NPC2P61916 151 aa9.47□□□□□ -0.89
PTPN7-217ENST00000495688 ADAMTSL4-AS1Q5T5F5 129 aa9.47□□□□□ -0.89
PTPN7-217ENST00000495688 CR1P17927 2039 aa9.47□□□□□ -0.89
PTPN7-217ENST00000495688 C9JAW5 83 aa9.47□□□□□ -0.89
PTPN7-217ENST00000495688 M0R2P5 195 aa9.47□□□□□ -0.89
PTPN7-217ENST00000495688 MRPS36P82909 103 aaKnown RBP9.47□□□□□ -0.89
PTPN7-217ENST00000495688 KHDC1LQ5JSQ8 128 aa9.47□□□□□ -0.89
PTPN7-217ENST00000495688 LITAFQ99732 161 aa9.47□□□□□ -0.89
PTPN7-217ENST00000495688 ERG28Q9UKR5 140 aa9.47□□□□□ -0.89
PTPN7-217ENST00000495688 ITPR3Q14573 2671 aa9.46□□□□□ -0.89
PTPN7-217ENST00000495688 MT-ATP8P03928 68 aa9.46□□□□□ -0.89
PTPN7-217ENST00000495688 SBSPONQ8IVN8 264 aa9.46□□□□□ -0.89
PTPN7-217ENST00000495688 PPDPFLQ8WWR9 84 aa9.46□□□□□ -0.89
PTPN7-217ENST00000495688 CHCHD7Q9BUK0 85 aa9.46□□□□□ -0.89
PTPN7-217ENST00000495688 PYGO1Q9Y3Y4 419 aa9.46□□□□□ -0.89
PTPN7-217ENST00000495688 PRB1P04280 392 aa9.46□□□□□ -0.9
PTPN7-217ENST00000495688 SPINK8P0C7L1 97 aa9.46□□□□□ -0.9
PTPN7-217ENST00000495688 XGP55808 180 aa9.46□□□□□ -0.9
PTPN7-217ENST00000495688 Q1RN00 199 aa9.46□□□□□ -0.9
PTPN7-217ENST00000495688 Q6ZSV7 163 aa9.46□□□□□ -0.9
PTPN7-217ENST00000495688 J3QLI3 93 aa9.45□□□□□ -0.9
PTPN7-217ENST00000495688 SLC25A20O43772 301 aa9.45□□□□□ -0.9
PTPN7-217ENST00000495688 Q6ZUT4 128 aa9.45□□□□□ -0.9
PTPN7-217ENST00000495688 LINC00467Q9BRT7 94 aa9.45□□□□□ -0.9
PTPN7-217ENST00000495688 A0A0B4J2C4 111 aa9.45□□□□□ -0.9
PTPN7-217ENST00000495688 KRTAP10-9P60411 292 aa9.45□□□□□ -0.9
PTPN7-217ENST00000495688 UBE2D4Q9Y2X8 147 aa9.45□□□□□ -0.9
PTPN7-217ENST00000495688 LINC01587Q99440 93 aa9.44□□□□□ -0.9
PTPN7-217ENST00000495688 MAP6D1Q9H9H5 199 aa9.44□□□□□ -0.9
PTPN7-217ENST00000495688 NDUFA12Q9UI09 145 aa9.44□□□□□ -0.9
PTPN7-217ENST00000495688 FSHBP01225 129 aa9.44□□□□□ -0.9
PTPN7-217ENST00000495688 IGHV4-31P0DP07 118 aa9.44□□□□□ -0.9
PTPN7-217ENST00000495688 EDA2RQ9HAV5 297 aa9.44□□□□□ -0.9
PTPN7-217ENST00000495688 IGHV1-58A0A0C4DH39 117 aa9.43□□□□□ -0.9
PTPN7-217ENST00000495688 ZNF415Q09FC8 603 aa9.43□□□□□ -0.9
PTPN7-217ENST00000495688 C11orf72Q8NBR9 251 aa9.43□□□□□ -0.9
PTPN7-217ENST00000495688 FLNAP21333 2647 aaKnown RBP9.43□□□□□ -0.9
PTPN7-217ENST00000495688 A8MTW9 85 aa9.42□□□□□ -0.9
PTPN7-217ENST00000495688 DAND5Q8N907 189 aa9.42□□□□□ -0.9
PTPN7-217ENST00000495688 VSIG2Q96IQ7 327 aa9.42□□□□□ -0.9
PTPN7-217ENST00000495688 TRIAP1O43715 76 aa9.42□□□□□ -0.9
PTPN7-217ENST00000495688 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.42□□□□□ -0.9
PTPN7-217ENST00000495688 XCL2Q9UBD3 114 aa9.42□□□□□ -0.9
PTPN7-217ENST00000495688 IGHV3OR16-12A0A075B7B8 117 aa9.41□□□□□ -0.9
PTPN7-217ENST00000495688 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.41□□□□□ -0.9
PTPN7-217ENST00000495688 CRYBA4P53673 196 aa9.41□□□□□ -0.9
PTPN7-217ENST00000495688 C11orf44Q8N8P7 122 aa9.41□□□□□ -0.9
PTPN7-217ENST00000495688 CDKN2A-AS1Q9UH64 79 aa9.41□□□□□ -0.9
PTPN7-217ENST00000495688 MTORP42345 2549 aa9.41□□□□□ -0.9
PTPN7-217ENST00000495688 TINCRA0A1B0GVN0 87 aa9.4□□□□□ -0.9
PTPN7-217ENST00000495688 DYNLRB2Q8TF09 96 aa9.4□□□□□ -0.9
PTPN7-217ENST00000495688 IGHV3-53P01767 116 aa9.4□□□□□ -0.9
PTPN7-217ENST00000495688 CKS1BP61024 79 aa9.4□□□□□ -0.9
PTPN7-217ENST00000495688 SPANXA1Q9NS26 97 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms