RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 ZNF469Q96JG9 3925 aaPredicted RBP4.92□□□□□ -1.62
FNDC3B-212ENST00000494000 OTOGQ6ZRI0 2925 aa4.92□□□□□ -1.62
FNDC3B-212ENST00000494000 IGHV1OR15-1A0A075B7D0 117 aa4.92□□□□□ -1.62
FNDC3B-212ENST00000494000 RBMY1BA6NDE4 496 aaKnown RBP4.92□□□□□ -1.62
FNDC3B-212ENST00000494000 A6NDN8 102 aa4.92□□□□□ -1.62
FNDC3B-212ENST00000494000 RBMY1EA6NEQ0 496 aaKnown RBP4.92□□□□□ -1.62
FNDC3B-212ENST00000494000 RBMY1DP0C7P1 496 aaKnown RBP4.92□□□□□ -1.62
FNDC3B-212ENST00000494000 RBMY1A1P0DJD3 496 aaKnown RBP4.92□□□□□ -1.62
FNDC3B-212ENST00000494000 REG3AQ06141 175 aa4.92□□□□□ -1.62
FNDC3B-212ENST00000494000 LAGE3Q14657 143 aa4.92□□□□□ -1.62
FNDC3B-212ENST00000494000 PRR9Q5T870 116 aa4.92□□□□□ -1.62
FNDC3B-212ENST00000494000 GDF5OSQ5U4N7 250 aa4.92□□□□□ -1.62
FNDC3B-212ENST00000494000 SPANXN1Q5VSR9 72 aa4.92□□□□□ -1.62
FNDC3B-212ENST00000494000 FAM104BQ5XKR9 115 aa4.92□□□□□ -1.62
FNDC3B-212ENST00000494000 SLC25A34Q6PIV7 304 aa4.92□□□□□ -1.62
FNDC3B-212ENST00000494000 SCRT2Q9NQ03 307 aa4.92□□□□□ -1.62
FNDC3B-212ENST00000494000 ANK3Q12955 4377 aaKnown RBP4.91□□□□□ -1.62
FNDC3B-212ENST00000494000 A0A1W2PPM0 123 aa4.91□□□□□ -1.62
FNDC3B-212ENST00000494000 NXPH4O95158 308 aa4.91□□□□□ -1.62
FNDC3B-212ENST00000494000 PPP1R17O96001 155 aa4.91□□□□□ -1.62
FNDC3B-212ENST00000494000 INSP01308 110 aa4.91□□□□□ -1.62
FNDC3B-212ENST00000494000 ATP5G1P05496 136 aa4.91□□□□□ -1.62
FNDC3B-212ENST00000494000 ZC2HC1BQ5TFG8 222 aa4.91□□□□□ -1.62
FNDC3B-212ENST00000494000 C11orf21Q9P2W6 132 aa4.91□□□□□ -1.62
FNDC3B-212ENST00000494000 PHLDA3Q9Y5J5 127 aa4.91□□□□□ -1.62
FNDC3B-212ENST00000494000 TRAV12-3A0A0B4J271 114 aa4.91□□□□□ -1.62
FNDC3B-212ENST00000494000 RPS28P62857 69 aaKnown RBP4.91□□□□□ -1.62
FNDC3B-212ENST00000494000 ODF3L2Q3SX64 289 aa4.91□□□□□ -1.62
FNDC3B-212ENST00000494000 ORMDL3Q8N138 153 aa4.91□□□□□ -1.62
FNDC3B-212ENST00000494000 WFDC9Q8NEX5 89 aa4.91□□□□□ -1.62
FNDC3B-212ENST00000494000 CHCHD1Q96BP2 118 aaKnown RBP4.91□□□□□ -1.62
FNDC3B-212ENST00000494000 U3KQK5 164 aa4.91□□□□□ -1.62
FNDC3B-212ENST00000494000 KNCNA6PVL3 124 aa4.9□□□□□ -1.62
FNDC3B-212ENST00000494000 SPINK13Q1W4C9 94 aa4.9□□□□□ -1.62
FNDC3B-212ENST00000494000 GTSCR1Q86UQ5 136 aa4.9□□□□□ -1.62
FNDC3B-212ENST00000494000 ZNF575Q86XF7 245 aa4.9□□□□□ -1.62
FNDC3B-212ENST00000494000 C18orf32Q8TCD1 76 aa4.9□□□□□ -1.62
FNDC3B-212ENST00000494000 SPANXA1Q9NS26 97 aa4.9□□□□□ -1.62
FNDC3B-212ENST00000494000 ACANP16112 2415 aa4.9□□□□□ -1.62
FNDC3B-212ENST00000494000 SONP18583 2426 aaKnown RBP4.9□□□□□ -1.63
FNDC3B-212ENST00000494000 TLN2Q9Y4G6 2542 aa4.9□□□□□ -1.63
FNDC3B-212ENST00000494000 H3BVH4 76 aa4.9□□□□□ -1.63
FNDC3B-212ENST00000494000 PRB4P10163 310 aaPredicted RBP4.9□□□□□ -1.63
FNDC3B-212ENST00000494000 DEFB1P60022 68 aa4.9□□□□□ -1.63
FNDC3B-212ENST00000494000 Q6ZUT4 128 aa4.9□□□□□ -1.63
FNDC3B-212ENST00000494000 PLAC8L1A1L4L8 177 aa4.89□□□□□ -1.63
FNDC3B-212ENST00000494000 CD7P09564 240 aa4.89□□□□□ -1.63
FNDC3B-212ENST00000494000 FRMD6-AS1P0C7T7 363 aa4.89□□□□□ -1.63
FNDC3B-212ENST00000494000 PFN2P35080 140 aa4.89□□□□□ -1.63
FNDC3B-212ENST00000494000 C20orf78Q9BR46 151 aa4.89□□□□□ -1.63
FNDC3B-212ENST00000494000 DPH3P1Q9H4G8 78 aa4.89□□□□□ -1.63
FNDC3B-212ENST00000494000 PYGO1Q9Y3Y4 419 aa4.89□□□□□ -1.63
FNDC3B-212ENST00000494000 TRAV26-2A0A0B4J265 109 aa4.89□□□□□ -1.63
FNDC3B-212ENST00000494000 IGHV3-16A0A0C4DH30 117 aa4.89□□□□□ -1.63
FNDC3B-212ENST00000494000 F8W1H4 67 aa4.89□□□□□ -1.63
FNDC3B-212ENST00000494000 IGKV3-20P01619 116 aa4.89□□□□□ -1.63
FNDC3B-212ENST00000494000 FABP2P12104 132 aa4.89□□□□□ -1.63
FNDC3B-212ENST00000494000 RNASE3P12724 160 aaKnown RBP4.89□□□□□ -1.63
FNDC3B-212ENST00000494000 NDUFV3P56181 108 aaKnown RBP4.89□□□□□ -1.63
FNDC3B-212ENST00000494000 WFDC2Q14508 124 aa4.89□□□□□ -1.63
FNDC3B-212ENST00000494000 Q75L30 129 aa4.89□□□□□ -1.63
FNDC3B-212ENST00000494000 BRK1Q8WUW1 75 aa4.89□□□□□ -1.63
FNDC3B-212ENST00000494000 SVEP1Q4LDE5 3571 aa4.88□□□□□ -1.63
FNDC3B-212ENST00000494000 M0R381 172 aa4.88□□□□□ -1.63
FNDC3B-212ENST00000494000 CRXO43186 299 aaPredicted RBP4.88□□□□□ -1.63
FNDC3B-212ENST00000494000 CKS2P33552 79 aa4.88□□□□□ -1.63
FNDC3B-212ENST00000494000 MRPL51Q4U2R6 128 aaKnown RBP4.88□□□□□ -1.63
FNDC3B-212ENST00000494000 FAM19A3Q7Z5A8 133 aa4.88□□□□□ -1.63
FNDC3B-212ENST00000494000 PRELID3AQ96N28 172 aa4.88□□□□□ -1.63
FNDC3B-212ENST00000494000 ZFHX3Q15911 3703 aa4.88□□□□□ -1.63
FNDC3B-212ENST00000494000 GNRH2O43555 120 aa4.88□□□□□ -1.63
FNDC3B-212ENST00000494000 SH2D6Q7Z4S9 175 aa4.88□□□□□ -1.63
FNDC3B-212ENST00000494000 FAM19A2Q8N3H0 131 aa4.88□□□□□ -1.63
FNDC3B-212ENST00000494000 POM121L12Q8N7R1 296 aa4.88□□□□□ -1.63
FNDC3B-212ENST00000494000 CSMD1Q96PZ7 3565 aa4.87□□□□□ -1.63
FNDC3B-212ENST00000494000 TRAV12-2A0A075B6T6 113 aa4.87□□□□□ -1.63
FNDC3B-212ENST00000494000 K7EMI3 77 aa4.87□□□□□ -1.63
FNDC3B-212ENST00000494000 HERVK_113P63121 156 aa4.87□□□□□ -1.63
FNDC3B-212ENST00000494000 KRTAP24-1Q3LI83 254 aa4.87□□□□□ -1.63
FNDC3B-212ENST00000494000 ETDBQ3ZM63 59 aa4.87□□□□□ -1.63
FNDC3B-212ENST00000494000 AMN1Q8IY45 258 aa4.87□□□□□ -1.63
FNDC3B-212ENST00000494000 NXT2Q9NPJ8 142 aaKnown RBP4.87□□□□□ -1.63
FNDC3B-212ENST00000494000 FAM229AH3BQW9 127 aa4.87□□□□□ -1.63
FNDC3B-212ENST00000494000 PCP2Q8IVA1 136 aa4.87□□□□□ -1.63
FNDC3B-212ENST00000494000 RAB37Q96AX2 223 aa4.87□□□□□ -1.63
FNDC3B-212ENST00000494000 RNF185Q96GF1 192 aa4.87□□□□□ -1.63
FNDC3B-212ENST00000494000 LINC01549A6NIU2 74 aa4.86□□□□□ -1.63
FNDC3B-212ENST00000494000 A8MWV9 139 aa4.86□□□□□ -1.63
FNDC3B-212ENST00000494000 D6R8Y8 96 aa4.86□□□□□ -1.63
FNDC3B-212ENST00000494000 M0R2P5 195 aa4.86□□□□□ -1.63
FNDC3B-212ENST00000494000 C3orf22Q8N5N4 141 aa4.86□□□□□ -1.63
FNDC3B-212ENST00000494000 PRSS3P2Q8NHM4 247 aa4.86□□□□□ -1.63
FNDC3B-212ENST00000494000 FN1P02751 2386 aaKnown RBP4.86□□□□□ -1.63
FNDC3B-212ENST00000494000 hDV102S1A0JD36 115 aa4.86□□□□□ -1.63
FNDC3B-212ENST00000494000 C2orf91Q6ZV80 131 aa4.86□□□□□ -1.63
FNDC3B-212ENST00000494000 TIMM8BQ9Y5J9 83 aaPredicted RBP4.86□□□□□ -1.63
FNDC3B-212ENST00000494000 HIVEP1P15822 2718 aa4.86□□□□□ -1.63
FNDC3B-212ENST00000494000 NSD1Q96L73 2696 aaPredicted RBP4.85□□□□□ -1.63
FNDC3B-212ENST00000494000 LINC01546A6NGU7 62 aa4.85□□□□□ -1.63
FNDC3B-212ENST00000494000 MSRB1Q9NZV6 116 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms