RNA–Protein interactions for RNA: ENST00000493217.1

TSC22D4-205, Transcript of TSC22 domain family member 4, humanhuman

TSL 1 (best)

Gene TSC22D4, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-205ENST00000493217 J3QQQ9 107 aa13.68□□□□□ -0.22
TSC22D4-205ENST00000493217 IGHV3-53P01767 116 aa13.68□□□□□ -0.22
TSC22D4-205ENST00000493217 SRSF9Q13242 221 aaKnown RBP eCLIP13.68□□□□□ -0.22
TSC22D4-205ENST00000493217 TSSC4Q9Y5U2 329 aaPredicted RBP13.68□□□□□ -0.22
TSC22D4-205ENST00000493217 AZU1P20160 251 aa13.67□□□□□ -0.22
TSC22D4-205ENST00000493217 C16orf95Q9H693 158 aa13.67□□□□□ -0.22
TSC22D4-205ENST00000493217 ANK3Q12955 4377 aaKnown RBP13.67□□□□□ -0.22
TSC22D4-205ENST00000493217 RS1O15537 224 aa13.67□□□□□ -0.22
TSC22D4-205ENST00000493217 RNASE1P07998 156 aaKnown RBP13.67□□□□□ -0.22
TSC22D4-205ENST00000493217 ZNF22P17026 224 aaPredicted RBP13.67□□□□□ -0.22
TSC22D4-205ENST00000493217 C1orf158Q8N1D5 194 aa13.67□□□□□ -0.22
TSC22D4-205ENST00000493217 YAE1D1Q9NRH1 226 aa13.67□□□□□ -0.22
TSC22D4-205ENST00000493217 A0A0J9YXV3 536 aa13.66□□□□□ -0.22
TSC22D4-205ENST00000493217 CRYBA4P53673 196 aa13.66□□□□□ -0.22
TSC22D4-205ENST00000493217 ITPR2Q14571 2701 aa13.66□□□□□ -0.22
TSC22D4-205ENST00000493217 TMEM238LA0A1B0GVL6 79 aa13.65□□□□□ -0.22
TSC22D4-205ENST00000493217 A6NJY4 79 aa13.65□□□□□ -0.22
TSC22D4-205ENST00000493217 RRN3P1Q2M238 152 aa13.65□□□□□ -0.22
TSC22D4-205ENST00000493217 SLC25A29Q8N8R3 303 aa13.65□□□□□ -0.22
TSC22D4-205ENST00000493217 SPANXB1Q9NS25 103 aaPredicted RBP13.65□□□□□ -0.22
TSC22D4-205ENST00000493217 SETD2Q9BYW2 2564 aaPredicted RBP13.65□□□□□ -0.22
TSC22D4-205ENST00000493217 K7ERU9 68 aa13.65□□□□□ -0.22
TSC22D4-205ENST00000493217 UBE2D1P51668 147 aa13.65□□□□□ -0.22
TSC22D4-205ENST00000493217 DNAJC30Q96LL9 226 aa13.65□□□□□ -0.22
TSC22D4-205ENST00000493217 CHCHD7Q9BUK0 85 aa13.65□□□□□ -0.22
TSC22D4-205ENST00000493217 LEPROTO15243 131 aa13.64□□□□□ -0.23
TSC22D4-205ENST00000493217 PLA2G2AP14555 144 aa13.63□□□□□ -0.23
TSC22D4-205ENST00000493217 LGALS3P17931 250 aaKnown RBP13.63□□□□□ -0.23
TSC22D4-205ENST00000493217 RNF151Q2KHN1 245 aa13.63□□□□□ -0.23
TSC22D4-205ENST00000493217 CEMP1Q6PRD7 247 aaPredicted RBP13.63□□□□□ -0.23
TSC22D4-205ENST00000493217 IL17DQ8TAD2 202 aa13.63□□□□□ -0.23
TSC22D4-205ENST00000493217 SAP30O75446 220 aa13.63□□□□□ -0.23
TSC22D4-205ENST00000493217 MTORP42345 2549 aa13.62□□□□□ -0.23
TSC22D4-205ENST00000493217 IGHV3OR16-12A0A075B7B8 117 aa13.62□□□□□ -0.23
TSC22D4-205ENST00000493217 MRPS36P82909 103 aaKnown RBP13.62□□□□□ -0.23
TSC22D4-205ENST00000493217 NIPBLQ6KC79 2804 aaeCLIP13.62□□□□□ -0.236e-7■□□□□ 10.3
TSC22D4-205ENST00000493217 IGHV3-30P01768 117 aa13.62□□□□□ -0.23
TSC22D4-205ENST00000493217 IGHV3-30-5P0DP03 117 aa13.62□□□□□ -0.23
TSC22D4-205ENST00000493217 UBE2D4Q9Y2X8 147 aa13.62□□□□□ -0.23
TSC22D4-205ENST00000493217 J3QKU1 62 aa13.61□□□□□ -0.23
TSC22D4-205ENST00000493217 SPANXA1Q9NS26 97 aa13.6□□□□□ -0.23
TSC22D4-205ENST00000493217 HELZ2Q9BYK8 2649 aaKnown RBP13.6□□□□□ -0.23
TSC22D4-205ENST00000493217 PGPEP1Q9NXJ5 209 aa13.6□□□□□ -0.23
TSC22D4-205ENST00000493217 IGHV3-38A0A0C4DH36 116 aa13.59□□□□□ -0.23
TSC22D4-205ENST00000493217 IGHV3-64A0A075B6Q5 118 aa13.59□□□□□ -0.23
TSC22D4-205ENST00000493217 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.59□□□□□ -0.23
TSC22D4-205ENST00000493217 IGKV2-29A2NJV5 120 aaPredicted RBP13.59□□□□□ -0.23
TSC22D4-205ENST00000493217 COTL1Q14019 142 aa13.59□□□□□ -0.23
TSC22D4-205ENST00000493217 TRGV1A0A0A0MS02 117 aa13.58□□□□□ -0.24
TSC22D4-205ENST00000493217 H3BMG7 143 aa13.58□□□□□ -0.24
TSC22D4-205ENST00000493217 RNASE13Q5GAN3 156 aaKnown RBP13.58□□□□□ -0.24
TSC22D4-205ENST00000493217 UNC79Q9P2D8 2635 aa13.57□□□□□ -0.24
TSC22D4-205ENST00000493217 CMC4P56277 68 aaPredicted RBP13.57□□□□□ -0.24
TSC22D4-205ENST00000493217 TMEM263Q8WUH6 116 aaKnown RBP13.57□□□□□ -0.24
TSC22D4-205ENST00000493217 SETXQ7Z333 2677 aaKnown RBP13.57□□□□□ -0.24
TSC22D4-205ENST00000493217 F8W1H4 67 aa13.57□□□□□ -0.24
TSC22D4-205ENST00000493217 IGLV1-51P01701 117 aa13.57□□□□□ -0.24
TSC22D4-205ENST00000493217 GIG44P09565 113 aaPredicted RBP13.57□□□□□ -0.24
TSC22D4-205ENST00000493217 NDUFA11Q86Y39 141 aa13.57□□□□□ -0.24
TSC22D4-205ENST00000493217 KMT2BQ9UMN6 2715 aaPredicted RBP13.56□□□□□ -0.24
TSC22D4-205ENST00000493217 IGHV3-30-3P0DP02 117 aa13.56□□□□□ -0.24
TSC22D4-205ENST00000493217 HILS1P60008 231 aa13.56□□□□□ -0.24
TSC22D4-205ENST00000493217 VPS25Q9BRG1 176 aa13.56□□□□□ -0.24
TSC22D4-205ENST00000493217 TINCRA0A1B0GVN0 87 aa13.55□□□□□ -0.24
TSC22D4-205ENST00000493217 ADARB2-AS1A8MUL3 147 aa13.55□□□□□ -0.24
TSC22D4-205ENST00000493217 G3V4G9 280 aa13.55□□□□□ -0.24
TSC22D4-205ENST00000493217 APOMO95445 188 aa13.55□□□□□ -0.24
TSC22D4-205ENST00000493217 CFC1BP0CG36 223 aa13.55□□□□□ -0.24
TSC22D4-205ENST00000493217 CFC1P0CG37 223 aa13.55□□□□□ -0.24
TSC22D4-205ENST00000493217 FAM110AQ9BQ89 295 aa13.55□□□□□ -0.24
TSC22D4-205ENST00000493217 TSPAN13O95857 204 aa13.55□□□□□ -0.24
TSC22D4-205ENST00000493217 Q6ZTI0 123 aa13.55□□□□□ -0.24
TSC22D4-205ENST00000493217 Q6ZUT4 128 aa13.55□□□□□ -0.24
TSC22D4-205ENST00000493217 C10orf126Q8N4M7 172 aa13.55□□□□□ -0.24
TSC22D4-205ENST00000493217 ZNF418Q8TF45 676 aaPredicted RBP13.55□□□□□ -0.24
TSC22D4-205ENST00000493217 TIMM21Q9BVV7 248 aa13.55□□□□□ -0.24
TSC22D4-205ENST00000493217 JMJD1CQ15652 2540 aa13.55□□□□□ -0.24
TSC22D4-205ENST00000493217 C19orf73Q9NVV2 129 aa13.54□□□□□ -0.24
TSC22D4-205ENST00000493217 WFDC10AQ9H1F0 79 aa13.54□□□□□ -0.24
TSC22D4-205ENST00000493217 IGHV1-58A0A0C4DH39 117 aa13.53□□□□□ -0.24
TSC22D4-205ENST00000493217 TRAV8-3A0A0A6YYJ7 113 aa13.52□□□□□ -0.24
TSC22D4-205ENST00000493217 NOTCH3Q9UM47 2321 aa13.52□□□□□ -0.25
TSC22D4-205ENST00000493217 TRAV4A0A0B4J268 109 aa13.52□□□□□ -0.25
TSC22D4-205ENST00000493217 TRBV10-1A0A0K0K1A3 114 aa13.52□□□□□ -0.25
TSC22D4-205ENST00000493217 DAZ2Q13117 558 aaKnown RBP13.52□□□□□ -0.25
TSC22D4-205ENST00000493217 WFDC2Q14508 124 aa13.52□□□□□ -0.25
TSC22D4-205ENST00000493217 A0A0J9YXY3 114 aa13.51□□□□□ -0.25
TSC22D4-205ENST00000493217 NDUFA7O95182 113 aa13.51□□□□□ -0.25
TSC22D4-205ENST00000493217 UBE2D3P61077 147 aa13.51□□□□□ -0.25
TSC22D4-205ENST00000493217 UBE2D2P62837 147 aa13.51□□□□□ -0.25
TSC22D4-205ENST00000493217 PRO0461Q9UI25 63 aa13.51□□□□□ -0.25
TSC22D4-205ENST00000493217 K7EQD1 137 aa13.51□□□□□ -0.25
TSC22D4-205ENST00000493217 PCP4P48539 62 aa13.51□□□□□ -0.25
TSC22D4-205ENST00000493217 GAGE13Q4V321 117 aa13.51□□□□□ -0.25
TSC22D4-205ENST00000493217 NOP10Q9NPE3 64 aaKnown RBP13.51□□□□□ -0.25
TSC22D4-205ENST00000493217 TEX48A0A1B0GUV7 120 aa13.5□□□□□ -0.25
TSC22D4-205ENST00000493217 PLAC8L1A1L4L8 177 aa13.5□□□□□ -0.25
TSC22D4-205ENST00000493217 TMEM238C9JI98 176 aa13.5□□□□□ -0.25
TSC22D4-205ENST00000493217 RPL24P83731 157 aaKnown RBP13.5□□□□□ -0.25
TSC22D4-205ENST00000493217 VSIG2Q96IQ7 327 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms