RNA–Protein interactions for RNA: ENST00000491701.1

CLIP4-211, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 1,401 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-211ENST00000491701 OR2K2Q8NGT1 345 aa3.15□□□□□ -1.91
CLIP4-211ENST00000491701 IMMP2LQ96T52 175 aa3.15□□□□□ -1.91
CLIP4-211ENST00000491701 KRTAP2-2Q9BYT5 123 aa3.15□□□□□ -1.91
CLIP4-211ENST00000491701 SMCO4Q9NRQ5 59 aa3.15□□□□□ -1.91
CLIP4-211ENST00000491701 HLA-DRB4X5D2U9 266 aa3.15□□□□□ -1.91
CLIP4-211ENST00000491701 IGLV8-61A0A075B6I0 122 aa3.14□□□□□ -1.91
CLIP4-211ENST00000491701 IGLV7-46A0A075B6I9 117 aa3.14□□□□□ -1.91
CLIP4-211ENST00000491701 TRAV12-2A0A075B6T6 113 aa3.14□□□□□ -1.91
CLIP4-211ENST00000491701 GRIFINA4D1Z8 144 aa3.14□□□□□ -1.91
CLIP4-211ENST00000491701 IFITM10A6NMD0 228 aa3.14□□□□□ -1.91
CLIP4-211ENST00000491701 FABP5P3A8MUU1 101 aa3.14□□□□□ -1.91
CLIP4-211ENST00000491701 H7BYZ3 331 aa3.14□□□□□ -1.91
CLIP4-211ENST00000491701 M0R2Z0 102 aa3.14□□□□□ -1.91
CLIP4-211ENST00000491701 NDUFS5O43920 106 aa3.14□□□□□ -1.91
CLIP4-211ENST00000491701 MT-ND4LP03901 98 aa3.14□□□□□ -1.91
CLIP4-211ENST00000491701 CHTF8P0CG12 524 aa3.14□□□□□ -1.91
CLIP4-211ENST00000491701 HIST1H1AQ02539 215 aaPredicted RBP3.14□□□□□ -1.91
CLIP4-211ENST00000491701 TDRG1Q3Y452 100 aa3.14□□□□□ -1.91
CLIP4-211ENST00000491701 COA6Q5JTJ3 125 aaKnown RBP3.14□□□□□ -1.91
CLIP4-211ENST00000491701 FOXI2Q6ZQN5 318 aa3.14□□□□□ -1.91
CLIP4-211ENST00000491701 ZNF493Q6ZR52 646 aa3.14□□□□□ -1.91
CLIP4-211ENST00000491701 DEFB125Q8N687 156 aa3.14□□□□□ -1.91
CLIP4-211ENST00000491701 POM121L12Q8N7R1 296 aa3.14□□□□□ -1.91
CLIP4-211ENST00000491701 CNFNQ9BYD5 112 aa3.14□□□□□ -1.91
CLIP4-211ENST00000491701 MDFICQ9P1T7 246 aa3.14□□□□□ -1.91
CLIP4-211ENST00000491701 PRO0628Q9UI54 55 aa3.14□□□□□ -1.91
CLIP4-211ENST00000491701 VPS13DQ5THJ4 4388 aa3.14□□□□□ -1.91
CLIP4-211ENST00000491701 SMIM26A0A096LP01 95 aa3.13□□□□□ -1.91
CLIP4-211ENST00000491701 A0A0U1RQV1 116 aa3.13□□□□□ -1.91
CLIP4-211ENST00000491701 F2Z2F3 143 aa3.13□□□□□ -1.91
CLIP4-211ENST00000491701 PSPHP1O15172 72 aa3.13□□□□□ -1.91
CLIP4-211ENST00000491701 IGKV3-20P01619 116 aa3.13□□□□□ -1.91
CLIP4-211ENST00000491701 ARMS2P0C7Q2 107 aa3.13□□□□□ -1.91
CLIP4-211ENST00000491701 MGST1P10620 155 aaKnown RBP3.13□□□□□ -1.91
CLIP4-211ENST00000491701 RNASE4P34096 147 aaKnown RBP3.13□□□□□ -1.91
CLIP4-211ENST00000491701 CTRLP40313 264 aa3.13□□□□□ -1.91
CLIP4-211ENST00000491701 PSMB2P49721 201 aa3.13□□□□□ -1.91
CLIP4-211ENST00000491701 CXCL6P80162 114 aa3.13□□□□□ -1.91
CLIP4-211ENST00000491701 SPINK13Q1W4C9 94 aa3.13□□□□□ -1.91
CLIP4-211ENST00000491701 TMEM97Q5BJF2 176 aa3.13□□□□□ -1.91
CLIP4-211ENST00000491701 IBA57Q5T440 356 aaKnown RBP3.13□□□□□ -1.91
CLIP4-211ENST00000491701 FAM162BQ5T6X4 162 aa3.13□□□□□ -1.91
CLIP4-211ENST00000491701 KPRPQ5T749 579 aaPredicted RBP3.13□□□□□ -1.91
CLIP4-211ENST00000491701 LYZL1Q6UWQ5 148 aa3.13□□□□□ -1.91
CLIP4-211ENST00000491701 CMTM2Q8TAZ6 248 aa3.13□□□□□ -1.91
CLIP4-211ENST00000491701 TSKUQ8WUA8 353 aa3.13□□□□□ -1.91
CLIP4-211ENST00000491701 FRZBQ92765 325 aa3.13□□□□□ -1.91
CLIP4-211ENST00000491701 LINC00467Q9BRT7 94 aa3.13□□□□□ -1.91
CLIP4-211ENST00000491701 RPP21Q9H633 154 aaKnown RBP3.13□□□□□ -1.91
CLIP4-211ENST00000491701 DNAH7Q8WXX0 4024 aa3.12□□□□□ -1.91
CLIP4-211ENST00000491701 TMSB15BA0A087X1C1 80 aa3.12□□□□□ -1.91
CLIP4-211ENST00000491701 TRAV12-3A0A0B4J271 114 aa3.12□□□□□ -1.91
CLIP4-211ENST00000491701 MUC21A0A0G2JKD1 596 aa3.12□□□□□ -1.91
CLIP4-211ENST00000491701 MUC21A0A140T8X8 626 aa3.12□□□□□ -1.91
CLIP4-211ENST00000491701 C7orf71A4D174 169 aa3.12□□□□□ -1.91
CLIP4-211ENST00000491701 SPINK4O60575 86 aa3.12□□□□□ -1.91
CLIP4-211ENST00000491701 S100A7P31151 101 aa3.12□□□□□ -1.91
CLIP4-211ENST00000491701 CSN1S1P47710 185 aa3.12□□□□□ -1.91
CLIP4-211ENST00000491701 UBE2G1P62253 170 aa3.12□□□□□ -1.91
CLIP4-211ENST00000491701 MORN3Q6PF18 240 aaPredicted RBP3.12□□□□□ -1.91
CLIP4-211ENST00000491701 ZNF705AQ6ZN79 300 aaPredicted RBP3.12□□□□□ -1.91
CLIP4-211ENST00000491701 OR4B1Q8NGF8 309 aa3.12□□□□□ -1.91
CLIP4-211ENST00000491701 FAM210BQ96KR6 192 aa3.12□□□□□ -1.91
CLIP4-211ENST00000491701 GFRA4Q9GZZ7 299 aa3.12□□□□□ -1.91
CLIP4-211ENST00000491701 U3KQK5 164 aa3.12□□□□□ -1.91
CLIP4-211ENST00000491701 PLECQ15149 4684 aaKnown RBP3.12□□□□□ -1.91
CLIP4-211ENST00000491701 TMEM189A5PLL7 270 aa3.11□□□□□ -1.91
CLIP4-211ENST00000491701 OR4C46A6NHA9 309 aa3.11□□□□□ -1.91
CLIP4-211ENST00000491701 ZNF705GA8MUZ8 300 aaPredicted RBP3.11□□□□□ -1.91
CLIP4-211ENST00000491701 HIGD1CA8MV81 97 aa3.11□□□□□ -1.91
CLIP4-211ENST00000491701 A8MWL6 223 aa3.11□□□□□ -1.91
CLIP4-211ENST00000491701 TRGC2P03986 189 aa3.11□□□□□ -1.91
CLIP4-211ENST00000491701 CRYGDP07320 174 aa3.11□□□□□ -1.91
CLIP4-211ENST00000491701 INSL3P51460 131 aa3.11□□□□□ -1.91
CLIP4-211ENST00000491701 CRYBA4P53673 196 aa3.11□□□□□ -1.91
CLIP4-211ENST00000491701 PMVKQ15126 192 aa3.11□□□□□ -1.91
CLIP4-211ENST00000491701 CASC10Q5T4H9 136 aa3.11□□□□□ -1.91
CLIP4-211ENST00000491701 TMEM78Q5T7P6 136 aa3.11□□□□□ -1.91
CLIP4-211ENST00000491701 OR10AG1Q8NH19 301 aa3.11□□□□□ -1.91
CLIP4-211ENST00000491701 DYNLRB2Q8TF09 96 aa3.11□□□□□ -1.91
CLIP4-211ENST00000491701 SAMD10Q9BYL1 202 aa3.11□□□□□ -1.91
CLIP4-211ENST00000491701 IGLV2-18A0A075B6J9 118 aa3.1□□□□□ -1.91
CLIP4-211ENST00000491701 TRAV9-1A0A075B6T8 112 aa3.1□□□□□ -1.91
CLIP4-211ENST00000491701 OR11H12B2RN74 326 aa3.1□□□□□ -1.91
CLIP4-211ENST00000491701 K7EIL1 84 aa3.1□□□□□ -1.91
CLIP4-211ENST00000491701 HIST1H2BKO60814 126 aa3.1□□□□□ -1.91
CLIP4-211ENST00000491701 HIST1H2BJP06899 126 aa3.1□□□□□ -1.91
CLIP4-211ENST00000491701 LINC00614P0C842 121 aa3.1□□□□□ -1.91
CLIP4-211ENST00000491701 TRGC1P0CF51 173 aa3.1□□□□□ -1.91
CLIP4-211ENST00000491701 NTF3P20783 257 aa3.1□□□□□ -1.91
CLIP4-211ENST00000491701 HIST1H2BOP23527 126 aa3.1□□□□□ -1.91
CLIP4-211ENST00000491701 HIST1H2BBP33778 126 aa3.1□□□□□ -1.91
CLIP4-211ENST00000491701 HIST1H2BDP58876 126 aa3.1□□□□□ -1.91
CLIP4-211ENST00000491701 RAB5BP61020 215 aa3.1□□□□□ -1.91
CLIP4-211ENST00000491701 HERVK_113P61574 105 aa3.1□□□□□ -1.91
CLIP4-211ENST00000491701 HIST1H2BCP62807 126 aa3.1□□□□□ -1.91
CLIP4-211ENST00000491701 HIST2H2BEQ16778 126 aa3.1□□□□□ -1.91
CLIP4-211ENST00000491701 C6orf99Q4VX62 202 aa3.1□□□□□ -1.91
CLIP4-211ENST00000491701 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.1□□□□□ -1.91
CLIP4-211ENST00000491701 SAMD13Q5VXD3 122 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms