RNA–Protein interactions for RNA: ENST00000491395.5

APP-216, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-216ENST00000491395 H7C1H1 209 aa5.34□□□□□ -1.55
APP-216ENST00000491395 IFNA1P01562 189 aa5.34□□□□□ -1.55
APP-216ENST00000491395 P01737 135 aa5.34□□□□□ -1.55
APP-216ENST00000491395 SULT1A2P50226 295 aa5.34□□□□□ -1.55
APP-216ENST00000491395 MEF2BQ02080 365 aaPredicted RBP5.34□□□□□ -1.55
APP-216ENST00000491395 REG3AQ06141 175 aa5.34□□□□□ -1.55
APP-216ENST00000491395 DGAT2L7PQ6IED9 249 aa5.34□□□□□ -1.55
APP-216ENST00000491395 EIF5AL1Q6IS14 154 aaKnown RBP5.34□□□□□ -1.55
APP-216ENST00000491395 RASL11AQ6T310 242 aa5.34□□□□□ -1.55
APP-216ENST00000491395 C9orf163Q8N9P6 203 aa5.34□□□□□ -1.55
APP-216ENST00000491395 C20orf203Q8NBC4 194 aa5.34□□□□□ -1.55
APP-216ENST00000491395 NUDT10Q8NFP7 164 aa5.34□□□□□ -1.55
APP-216ENST00000491395 NUDT11Q96G61 164 aa5.34□□□□□ -1.55
APP-216ENST00000491395 GFRA4Q9GZZ7 299 aa5.34□□□□□ -1.55
APP-216ENST00000491395 IGLV4-60A0A075B6I1 120 aa5.33□□□□□ -1.56
APP-216ENST00000491395 GAGE10A6NGK3 116 aa5.33□□□□□ -1.56
APP-216ENST00000491395 F2Z2F3 143 aa5.33□□□□□ -1.56
APP-216ENST00000491395 TEX46H3BTG2 121 aa5.33□□□□□ -1.56
APP-216ENST00000491395 PANO1I0J062 215 aa5.33□□□□□ -1.56
APP-216ENST00000491395 PDE6DO43924 150 aa5.33□□□□□ -1.56
APP-216ENST00000491395 BCL2P10415 239 aa5.33□□□□□ -1.56
APP-216ENST00000491395 NTF3P20783 257 aa5.33□□□□□ -1.56
APP-216ENST00000491395 SDIM1Q6ZPB5 146 aa5.33□□□□□ -1.56
APP-216ENST00000491395 C9orf62Q8N4C0 152 aa5.33□□□□□ -1.56
APP-216ENST00000491395 TMEM243Q9BU79 118 aa5.33□□□□□ -1.56
APP-216ENST00000491395 NIT2Q9NQR4 276 aa5.33□□□□□ -1.56
APP-216ENST00000491395 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.33□□□□□ -1.56
APP-216ENST00000491395 TRGC1P0CF51 173 aa5.32□□□□□ -1.56
APP-216ENST00000491395 TAGLN2P37802 199 aaKnown RBP5.32□□□□□ -1.56
APP-216ENST00000491395 HNRNPA3P51991 378 aaKnown RBP5.32□□□□□ -1.56
APP-216ENST00000491395 RPL37AP61513 92 aaKnown RBP5.32□□□□□ -1.56
APP-216ENST00000491395 SMIM12Q96EX1 92 aa5.32□□□□□ -1.56
APP-216ENST00000491395 DPH3P1Q9H4G8 78 aa5.32□□□□□ -1.56
APP-216ENST00000491395 TRAV8-4A0A0B4J246 113 aa5.31□□□□□ -1.56
APP-216ENST00000491395 TRAV26-2A0A0B4J265 109 aa5.31□□□□□ -1.56
APP-216ENST00000491395 A0A1B0GUV1 79 aa5.31□□□□□ -1.56
APP-216ENST00000491395 hDV102S1A0JD36 115 aa5.31□□□□□ -1.56
APP-216ENST00000491395 OXTP01178 125 aa5.31□□□□□ -1.56
APP-216ENST00000491395 SLPIP03973 132 aa5.31□□□□□ -1.56
APP-216ENST00000491395 CTRLP40313 264 aa5.31□□□□□ -1.56
APP-216ENST00000491395 AMTP48728 403 aa5.31□□□□□ -1.56
APP-216ENST00000491395 TWIST1Q15672 202 aa5.31□□□□□ -1.56
APP-216ENST00000491395 SLC51BQ86UW2 128 aa5.31□□□□□ -1.56
APP-216ENST00000491395 GATD1Q8NB37 220 aa5.31□□□□□ -1.56
APP-216ENST00000491395 OCC1Q8TAD7 63 aa5.31□□□□□ -1.56
APP-216ENST00000491395 RNASE7Q9H1E1 156 aaKnown RBP5.31□□□□□ -1.56
APP-216ENST00000491395 BIN3Q9NQY0 253 aa5.31□□□□□ -1.56
APP-216ENST00000491395 F8WDY8 70 aa5.3□□□□□ -1.56
APP-216ENST00000491395 K7EN84 100 aa5.3□□□□□ -1.56
APP-216ENST00000491395 UBE2L6O14933 153 aa5.3□□□□□ -1.56
APP-216ENST00000491395 FOXA3P55318 350 aaPredicted RBP5.3□□□□□ -1.56
APP-216ENST00000491395 CNBPP62633 177 aaKnown RBP5.3□□□□□ -1.56
APP-216ENST00000491395 TCTE3Q8IZS6 198 aa5.3□□□□□ -1.56
APP-216ENST00000491395 PGLYRP4Q96LB8 373 aa5.3□□□□□ -1.56
APP-216ENST00000491395 RPP21Q9H633 154 aaKnown RBP5.3□□□□□ -1.56
APP-216ENST00000491395 IGKV3OR2-268A0A0C4DH90 116 aa5.29□□□□□ -1.56
APP-216ENST00000491395 GAGE12HA6NDE8 117 aa5.29□□□□□ -1.56
APP-216ENST00000491395 GTSF1Q8WW33 167 aa5.29□□□□□ -1.56
APP-216ENST00000491395 RPL39LQ96EH5 51 aaKnown RBP5.29□□□□□ -1.56
APP-216ENST00000491395 DPH3Q96FX2 82 aa5.29□□□□□ -1.56
APP-216ENST00000491395 CNFNQ9BYD5 112 aa5.29□□□□□ -1.56
APP-216ENST00000491395 VCX2Q9H322 139 aa5.29□□□□□ -1.56
APP-216ENST00000491395 AP5S1Q9NUS5 200 aa5.29□□□□□ -1.56
APP-216ENST00000491395 UBR4Q5T4S7 5183 aa5.28□□□□□ -1.56
APP-216ENST00000491395 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.28□□□□□ -1.56
APP-216ENST00000491395 IGKV2-29A2NJV5 120 aaPredicted RBP5.28□□□□□ -1.56
APP-216ENST00000491395 CHTF8P0CG12 524 aa5.28□□□□□ -1.56
APP-216ENST00000491395 MALP21145 153 aa5.28□□□□□ -1.56
APP-216ENST00000491395 CIRBPQ14011 172 aaKnown RBP5.28□□□□□ -1.56
APP-216ENST00000491395 SERTAD4-AS1Q5TG53 156 aa5.28□□□□□ -1.56
APP-216ENST00000491395 Q6ZNX1 250 aa5.28□□□□□ -1.56
APP-216ENST00000491395 IGHV3-64A0A075B6Q5 118 aa5.27□□□□□ -1.57
APP-216ENST00000491395 A0A087WYN8 130 aa5.27□□□□□ -1.57
APP-216ENST00000491395 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.27□□□□□ -1.57
APP-216ENST00000491395 GATCO43716 136 aaKnown RBP5.27□□□□□ -1.57
APP-216ENST00000491395 PCP4P48539 62 aa5.27□□□□□ -1.57
APP-216ENST00000491395 AMMECR1LQ6DCA0 310 aa5.27□□□□□ -1.57
APP-216ENST00000491395 C15orf56Q8N910 161 aa5.27□□□□□ -1.57
APP-216ENST00000491395 SDHAF1A6NFY7 115 aa5.26□□□□□ -1.57
APP-216ENST00000491395 TMEM250H0YL14 139 aa5.26□□□□□ -1.57
APP-216ENST00000491395 GAS8-AS1O95177 125 aa5.26□□□□□ -1.57
APP-216ENST00000491395 APCSP02743 223 aa5.26□□□□□ -1.57
APP-216ENST00000491395 FGF6P10767 208 aa5.26□□□□□ -1.57
APP-216ENST00000491395 CEBPGP53567 150 aa5.26□□□□□ -1.57
APP-216ENST00000491395 HIGD2BQ4VC39 106 aa5.26□□□□□ -1.57
APP-216ENST00000491395 RNASEKQ6P5S7 137 aaKnown RBP5.26□□□□□ -1.57
APP-216ENST00000491395 ALKAL2Q6UX46 152 aa5.26□□□□□ -1.57
APP-216ENST00000491395 SMIM15Q7Z3B0 74 aa5.26□□□□□ -1.57
APP-216ENST00000491395 CHCHD10Q8WYQ3 142 aaPredicted RBP5.26□□□□□ -1.57
APP-216ENST00000491395 FAM231BA6NCW3 169 aa5.25□□□□□ -1.57
APP-216ENST00000491395 A8MWL6 223 aa5.25□□□□□ -1.57
APP-216ENST00000491395 NCR2O95944 276 aa5.25□□□□□ -1.57
APP-216ENST00000491395 PMCHP20382 165 aa5.25□□□□□ -1.57
APP-216ENST00000491395 BLOC1S1P78537 153 aa5.25□□□□□ -1.57
APP-216ENST00000491395 COX6A2Q02221 97 aa5.25□□□□□ -1.57
APP-216ENST00000491395 FAM231DQ6ZW35 169 aa5.25□□□□□ -1.57
APP-216ENST00000491395 SPACA4Q8TDM5 124 aa5.25□□□□□ -1.57
APP-216ENST00000491395 RNF185Q96GF1 192 aa5.25□□□□□ -1.57
APP-216ENST00000491395 TRBV6-5A0A0K0K1A5 114 aa5.24□□□□□ -1.57
APP-216ENST00000491395 H7C423 109 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms