RNA–Protein interactions for RNA: ENST00000490851.5

HDAC9-225, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-225ENST00000490851 LINC00526Q96FQ7 95 aa7.48□□□□□ -1.21
HDAC9-225ENST00000490851 UQCRQO14949 82 aa7.48□□□□□ -1.21
HDAC9-225ENST00000490851 C9orf153Q5TBE3 101 aa7.48□□□□□ -1.21
HDAC9-225ENST00000490851 AMN1Q8IY45 258 aa7.48□□□□□ -1.21
HDAC9-225ENST00000490851 GNRH2O43555 120 aa7.47□□□□□ -1.21
HDAC9-225ENST00000490851 SMIM13P0DJ93 91 aa7.47□□□□□ -1.21
HDAC9-225ENST00000490851 S100A4P26447 101 aaKnown RBP7.47□□□□□ -1.21
HDAC9-225ENST00000490851 C10orf126Q8N4M7 172 aa7.47□□□□□ -1.21
HDAC9-225ENST00000490851 FAM236AA0A1B0GUQ0 79 aa7.47□□□□□ -1.21
HDAC9-225ENST00000490851 FAM236BA0A1B0GV22 79 aa7.47□□□□□ -1.21
HDAC9-225ENST00000490851 A0A1B0GWB2 263 aa7.47□□□□□ -1.21
HDAC9-225ENST00000490851 MAST4O15021 2626 aa7.46□□□□□ -1.21
HDAC9-225ENST00000490851 KLLNB2CW77 178 aa7.46□□□□□ -1.22
HDAC9-225ENST00000490851 E9PLD3 99 aa7.46□□□□□ -1.22
HDAC9-225ENST00000490851 CARD19Q96LW7 228 aa7.46□□□□□ -1.22
HDAC9-225ENST00000490851 MAP6D1Q9H9H5 199 aa7.46□□□□□ -1.22
HDAC9-225ENST00000490851 SMKR1H3BMG3 65 aa7.46□□□□□ -1.22
HDAC9-225ENST00000490851 M0R381 172 aa7.46□□□□□ -1.22
HDAC9-225ENST00000490851 SPANXN1Q5VSR9 72 aa7.46□□□□□ -1.22
HDAC9-225ENST00000490851 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.46□□□□□ -1.22
HDAC9-225ENST00000490851 DPH3Q96FX2 82 aa7.46□□□□□ -1.22
HDAC9-225ENST00000490851 CYSRT1A8MQ03 144 aa7.45□□□□□ -1.22
HDAC9-225ENST00000490851 NCR2O95944 276 aa7.45□□□□□ -1.22
HDAC9-225ENST00000490851 FAM19A2Q8N3H0 131 aa7.45□□□□□ -1.22
HDAC9-225ENST00000490851 D6R8Y8 96 aa7.44□□□□□ -1.22
HDAC9-225ENST00000490851 J3QQQ9 107 aa7.44□□□□□ -1.22
HDAC9-225ENST00000490851 HTN1P15515 57 aa7.44□□□□□ -1.22
HDAC9-225ENST00000490851 TMEM258P61165 79 aa7.44□□□□□ -1.22
HDAC9-225ENST00000490851 PRIMA1Q86XR5 153 aa7.44□□□□□ -1.22
HDAC9-225ENST00000490851 C1orf158Q8N1D5 194 aa7.44□□□□□ -1.22
HDAC9-225ENST00000490851 ZNF256Q9Y2P7 627 aaPredicted RBP7.44□□□□□ -1.22
HDAC9-225ENST00000490851 DPM2O94777 84 aa7.44□□□□□ -1.22
HDAC9-225ENST00000490851 CD7P09564 240 aa7.44□□□□□ -1.22
HDAC9-225ENST00000490851 FAM104BQ5XKR9 115 aa7.44□□□□□ -1.22
HDAC9-225ENST00000490851 TMEM70Q9BUB7 260 aa7.44□□□□□ -1.22
HDAC9-225ENST00000490851 PYGO1Q9Y3Y4 419 aa7.44□□□□□ -1.22
HDAC9-225ENST00000490851 RBMY1BA6NDE4 496 aaKnown RBP7.43□□□□□ -1.22
HDAC9-225ENST00000490851 RBMY1EA6NEQ0 496 aaKnown RBP7.43□□□□□ -1.22
HDAC9-225ENST00000490851 H3BMM0 161 aa7.43□□□□□ -1.22
HDAC9-225ENST00000490851 RBMY1DP0C7P1 496 aaKnown RBP7.43□□□□□ -1.22
HDAC9-225ENST00000490851 HLA-DRB4P13762 266 aa7.43□□□□□ -1.22
HDAC9-225ENST00000490851 ODF3L2Q3SX64 289 aa7.43□□□□□ -1.22
HDAC9-225ENST00000490851 MRPL51Q4U2R6 128 aaKnown RBP7.43□□□□□ -1.22
HDAC9-225ENST00000490851 MORN3Q6PF18 240 aaPredicted RBP7.43□□□□□ -1.22
HDAC9-225ENST00000490851 ZNF493Q6ZR52 646 aa7.43□□□□□ -1.22
HDAC9-225ENST00000490851 NDUFA11Q86Y39 141 aa7.43□□□□□ -1.22
HDAC9-225ENST00000490851 PHLDA3Q9Y5J5 127 aa7.43□□□□□ -1.22
HDAC9-225ENST00000490851 HLA-DRB4X5D2U9 266 aa7.43□□□□□ -1.22
HDAC9-225ENST00000490851 LOC389332A0A1B0GUA5 103 aa7.43□□□□□ -1.22
HDAC9-225ENST00000490851 TRAV2A0A0B4J234 112 aa7.42□□□□□ -1.22
HDAC9-225ENST00000490851 TRAV4A0A0B4J268 109 aa7.42□□□□□ -1.22
HDAC9-225ENST00000490851 GAS8-AS1O95177 125 aa7.42□□□□□ -1.22
HDAC9-225ENST00000490851 OR5AL1P0C617 328 aa7.42□□□□□ -1.22
HDAC9-225ENST00000490851 CKS2P33552 79 aa7.42□□□□□ -1.22
HDAC9-225ENST00000490851 PFN2P35080 140 aa7.42□□□□□ -1.22
HDAC9-225ENST00000490851 ODF3Q96PU9 254 aa7.42□□□□□ -1.22
HDAC9-225ENST00000490851 CNFNQ9BYD5 112 aa7.42□□□□□ -1.22
HDAC9-225ENST00000490851 TRAV26-2A0A0B4J265 109 aa7.42□□□□□ -1.22
HDAC9-225ENST00000490851 PRM2P04554 102 aa7.42□□□□□ -1.22
HDAC9-225ENST00000490851 CRYGAP11844 174 aa7.42□□□□□ -1.22
HDAC9-225ENST00000490851 RAB37Q96AX2 223 aa7.42□□□□□ -1.22
HDAC9-225ENST00000490851 URB1-AS1Q96HZ7 61 aa7.42□□□□□ -1.22
HDAC9-225ENST00000490851 WFDC10AQ9H1F0 79 aa7.42□□□□□ -1.22
HDAC9-225ENST00000490851 STAB1Q9NY15 2570 aa7.42□□□□□ -1.22
HDAC9-225ENST00000490851 ATP5G1P05496 136 aa7.41□□□□□ -1.22
HDAC9-225ENST00000490851 RBMY1A1P0DJD3 496 aaKnown RBP7.41□□□□□ -1.22
HDAC9-225ENST00000490851 RBMY1CP0DJD4 496 aa7.41□□□□□ -1.22
HDAC9-225ENST00000490851 RNASE3P12724 160 aaKnown RBP7.41□□□□□ -1.22
HDAC9-225ENST00000490851 GATA1P15976 413 aaPredicted RBP7.41□□□□□ -1.22
HDAC9-225ENST00000490851 RBMY1FQ15415 496 aaKnown RBP7.41□□□□□ -1.22
HDAC9-225ENST00000490851 RRN3P1Q2M238 152 aa7.41□□□□□ -1.22
HDAC9-225ENST00000490851 GAGE2AQ6NT46 116 aa7.41□□□□□ -1.22
HDAC9-225ENST00000490851 NFE4Q86UQ8 179 aa7.41□□□□□ -1.22
HDAC9-225ENST00000490851 ORMDL3Q8N138 153 aa7.41□□□□□ -1.22
HDAC9-225ENST00000490851 RNF185Q96GF1 192 aa7.41□□□□□ -1.22
HDAC9-225ENST00000490851 MUC4Q99102 2169 aa7.41□□□□□ -1.22
HDAC9-225ENST00000490851 NDUFC2O95298 119 aa7.41□□□□□ -1.22
HDAC9-225ENST00000490851 CD164L2Q6UWJ8 174 aa7.41□□□□□ -1.22
HDAC9-225ENST00000490851 TEN1Q86WV5 123 aa7.41□□□□□ -1.22
HDAC9-225ENST00000490851 SPATA3Q8NHX4 192 aa7.41□□□□□ -1.22
HDAC9-225ENST00000490851 TP73-AS1Q9UF72 201 aa7.41□□□□□ -1.22
HDAC9-225ENST00000490851 IGHV1OR15-1A0A075B7D0 117 aa7.4□□□□□ -1.22
HDAC9-225ENST00000490851 NPYP01303 97 aa7.4□□□□□ -1.22
HDAC9-225ENST00000490851 CACNG7P62955 275 aa7.4□□□□□ -1.22
HDAC9-225ENST00000490851 Q8N1Y9 231 aa7.4□□□□□ -1.22
HDAC9-225ENST00000490851 C14orf178Q8N769 122 aaPredicted RBP7.4□□□□□ -1.22
HDAC9-225ENST00000490851 TRRAPQ9Y4A5 3859 aa7.4□□□□□ -1.22
HDAC9-225ENST00000490851 IGLV1-51P01701 117 aa7.4□□□□□ -1.23
HDAC9-225ENST00000490851 MGPP08493 103 aa7.4□□□□□ -1.23
HDAC9-225ENST00000490851 CFAP126Q5VTH2 177 aa7.4□□□□□ -1.23
HDAC9-225ENST00000490851 C3orf56Q8N813 242 aa7.4□□□□□ -1.23
HDAC9-225ENST00000490851 LINC00482Q8N8I6 264 aa7.4□□□□□ -1.23
HDAC9-225ENST00000490851 PRSS3P2Q8NHM4 247 aa7.4□□□□□ -1.23
HDAC9-225ENST00000490851 PHLDA1Q8WV24 401 aaPredicted RBP7.4□□□□□ -1.23
HDAC9-225ENST00000490851 XCL2Q9UBD3 114 aa7.4□□□□□ -1.23
HDAC9-225ENST00000490851 IFI27P40305 119 aaPredicted RBP7.39□□□□□ -1.23
HDAC9-225ENST00000490851 PMAIP1Q13794 54 aa7.39□□□□□ -1.23
HDAC9-225ENST00000490851 IGHV3OR16-12A0A075B7B8 117 aa7.39□□□□□ -1.23
HDAC9-225ENST00000490851 FGF6P10767 208 aa7.39□□□□□ -1.23
HDAC9-225ENST00000490851 IGHV3-16A0A0C4DH30 117 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms