RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 INSP01308 110 aa9.63□□□□□ -0.87
SHOX2-205ENST00000490689 MSMBP08118 114 aa9.63□□□□□ -0.87
SHOX2-205ENST00000490689 RPL35AP18077 110 aaKnown RBP9.63□□□□□ -0.87
SHOX2-205ENST00000490689 APRG1Q8IVJ8 170 aa9.63□□□□□ -0.87
SHOX2-205ENST00000490689 PRM2P04554 102 aa9.62□□□□□ -0.87
SHOX2-205ENST00000490689 Q6ZSV7 163 aa9.62□□□□□ -0.87
SHOX2-205ENST00000490689 Q9HAA7 133 aa9.62□□□□□ -0.87
SHOX2-205ENST00000490689 ZNF580Q9UK33 172 aa9.62□□□□□ -0.87
SHOX2-205ENST00000490689 B4DSR2 109 aa9.62□□□□□ -0.87
SHOX2-205ENST00000490689 PCSK5Q92824 1860 aa9.62□□□□□ -0.87
SHOX2-205ENST00000490689 IGHV1-58A0A0C4DH39 117 aa9.62□□□□□ -0.87
SHOX2-205ENST00000490689 SMCPP49901 116 aaPredicted RBP9.61□□□□□ -0.87
SHOX2-205ENST00000490689 U3KQE9 123 aa9.61□□□□□ -0.87
SHOX2-205ENST00000490689 SPTBN5Q9NRC6 3674 aaKnown RBP9.61□□□□□ -0.87
SHOX2-205ENST00000490689 IGLV4-3A0A075B6K6 122 aa9.61□□□□□ -0.87
SHOX2-205ENST00000490689 A0A0B4J2C4 111 aa9.61□□□□□ -0.87
SHOX2-205ENST00000490689 TMEM223A0PJW6 202 aa9.61□□□□□ -0.87
SHOX2-205ENST00000490689 TMEM86BQ8N661 226 aa9.61□□□□□ -0.87
SHOX2-205ENST00000490689 H3BT86 120 aa9.61□□□□□ -0.87
SHOX2-205ENST00000490689 MED14OSP0DP75 135 aa9.61□□□□□ -0.87
SHOX2-205ENST00000490689 LRRK2Q5S007 2527 aa9.61□□□□□ -0.87
SHOX2-205ENST00000490689 CDKN2A-AS1Q9UH64 79 aa9.6□□□□□ -0.87
SHOX2-205ENST00000490689 COL6A3P12111 3177 aa9.6□□□□□ -0.87
SHOX2-205ENST00000490689 ADORA2A-AS1P86434 159 aa9.6□□□□□ -0.87
SHOX2-205ENST00000490689 ZFYVE26Q68DK2 2539 aa9.6□□□□□ -0.87
SHOX2-205ENST00000490689 POLR2KP53803 58 aaKnown RBP9.6□□□□□ -0.87
SHOX2-205ENST00000490689 UBE2D3P61077 147 aa9.6□□□□□ -0.87
SHOX2-205ENST00000490689 UBE2D2P62837 147 aa9.6□□□□□ -0.87
SHOX2-205ENST00000490689 M0QY20 66 aa9.59□□□□□ -0.87
SHOX2-205ENST00000490689 DEFB130BP0DP73 79 aa9.59□□□□□ -0.87
SHOX2-205ENST00000490689 DEFB130AP0DP74 79 aa9.59□□□□□ -0.87
SHOX2-205ENST00000490689 HERVK_113P63121 156 aa9.59□□□□□ -0.87
SHOX2-205ENST00000490689 CRLF1O75462 422 aa9.59□□□□□ -0.87
SHOX2-205ENST00000490689 HTN3P15516 51 aa9.59□□□□□ -0.87
SHOX2-205ENST00000490689 CFAP161Q6P656 301 aa9.59□□□□□ -0.87
SHOX2-205ENST00000490689 SPANXA1Q9NS26 97 aa9.59□□□□□ -0.87
SHOX2-205ENST00000490689 IGIPA6NJ69 53 aa9.59□□□□□ -0.87
SHOX2-205ENST00000490689 IGLV4-69A0A075B6H9 119 aa9.58□□□□□ -0.88
SHOX2-205ENST00000490689 IGHV4-4A0A075B6R2 117 aa9.58□□□□□ -0.88
SHOX2-205ENST00000490689 MIAQ16674 131 aa9.58□□□□□ -0.88
SHOX2-205ENST00000490689 PRO0461Q9UI25 63 aa9.58□□□□□ -0.88
SHOX2-205ENST00000490689 A0A0J9YX75 114 aa9.58□□□□□ -0.88
SHOX2-205ENST00000490689 SOCS3O14543 225 aa9.58□□□□□ -0.88
SHOX2-205ENST00000490689 EDN2P20800 178 aa9.58□□□□□ -0.88
SHOX2-205ENST00000490689 EBI3Q14213 229 aa9.58□□□□□ -0.88
SHOX2-205ENST00000490689 Q8N6K4 173 aa9.58□□□□□ -0.88
SHOX2-205ENST00000490689 LAMTOR3Q9UHA4 124 aa9.58□□□□□ -0.88
SHOX2-205ENST00000490689 LINC01619G3V211 115 aa9.57□□□□□ -0.88
SHOX2-205ENST00000490689 SLURP1P55000 103 aa9.57□□□□□ -0.88
SHOX2-205ENST00000490689 DEFB112Q30KQ8 113 aa9.57□□□□□ -0.88
SHOX2-205ENST00000490689 S100A7L2Q5SY68 101 aa9.57□□□□□ -0.88
SHOX2-205ENST00000490689 C5orf38Q86SI9 138 aa9.57□□□□□ -0.88
SHOX2-205ENST00000490689 TRBV27A0A0K0K1C4 114 aa9.57□□□□□ -0.88
SHOX2-205ENST00000490689 MALP21145 153 aa9.57□□□□□ -0.88
SHOX2-205ENST00000490689 CLPSL2Q6UWE3 100 aa9.57□□□□□ -0.88
SHOX2-205ENST00000490689 COX8CQ7Z4L0 72 aa9.57□□□□□ -0.88
SHOX2-205ENST00000490689 CDSNQ15517 529 aa9.57□□□□□ -0.88
SHOX2-205ENST00000490689 C10orf99Q6UWK7 81 aa9.57□□□□□ -0.88
SHOX2-205ENST00000490689 VSIG2Q96IQ7 327 aa9.57□□□□□ -0.88
SHOX2-205ENST00000490689 LMO4P61968 165 aa9.56□□□□□ -0.88
SHOX2-205ENST00000490689 GPHB5Q86YW7 130 aa9.56□□□□□ -0.88
SHOX2-205ENST00000490689 TMEM263Q8WUH6 116 aaKnown RBP9.56□□□□□ -0.88
SHOX2-205ENST00000490689 CENPEQ02224 2701 aa9.56□□□□□ -0.88
SHOX2-205ENST00000490689 A0A1B0GX51 115 aa9.56□□□□□ -0.88
SHOX2-205ENST00000490689 TRACP01848 142 aa9.56□□□□□ -0.88
SHOX2-205ENST00000490689 PSMG3-AS1Q96PY0 264 aa9.56□□□□□ -0.88
SHOX2-205ENST00000490689 TMEM243Q9BU79 118 aa9.56□□□□□ -0.88
SHOX2-205ENST00000490689 CRYGDP07320 174 aa9.55□□□□□ -0.88
SHOX2-205ENST00000490689 SND1-IT1Q9HBX3 110 aa9.55□□□□□ -0.88
SHOX2-205ENST00000490689 IGHG2P01859 326 aa9.55□□□□□ -0.88
SHOX2-205ENST00000490689 DAZ2Q13117 558 aaKnown RBP9.55□□□□□ -0.88
SHOX2-205ENST00000490689 DAZ4Q86SG3 579 aaKnown RBP9.55□□□□□ -0.88
SHOX2-205ENST00000490689 LINC00467Q9BRT7 94 aa9.55□□□□□ -0.88
SHOX2-205ENST00000490689 DAZ3Q9NR90 486 aaKnown RBP9.55□□□□□ -0.88
SHOX2-205ENST00000490689 IGHV4OR15-8A0A075B7B6 117 aa9.55□□□□□ -0.88
SHOX2-205ENST00000490689 A0A087WW49 117 aa9.55□□□□□ -0.88
SHOX2-205ENST00000490689 TRBV30A0A0K0K1B3 111 aa9.55□□□□□ -0.88
SHOX2-205ENST00000490689 ATP5G1P05496 136 aa9.55□□□□□ -0.88
SHOX2-205ENST00000490689 RPL32P62910 135 aaKnown RBP9.55□□□□□ -0.88
SHOX2-205ENST00000490689 TMEM126AQ9H061 195 aa9.55□□□□□ -0.88
SHOX2-205ENST00000490689 IGHV4-30-2A0A087WSY4 118 aa9.54□□□□□ -0.88
SHOX2-205ENST00000490689 A0A096LPF7 62 aa9.54□□□□□ -0.88
SHOX2-205ENST00000490689 TSHBP01222 138 aa9.54□□□□□ -0.88
SHOX2-205ENST00000490689 COX6B1P14854 86 aa9.54□□□□□ -0.88
SHOX2-205ENST00000490689 TRAV13-2A0A0B4J235 113 aa9.54□□□□□ -0.88
SHOX2-205ENST00000490689 H7C423 109 aa9.54□□□□□ -0.88
SHOX2-205ENST00000490689 ACYP1P07311 99 aa9.54□□□□□ -0.88
SHOX2-205ENST00000490689 H3BUA1 57 aa9.54□□□□□ -0.88
SHOX2-205ENST00000490689 NRGNQ92686 78 aa9.54□□□□□ -0.88
SHOX2-205ENST00000490689 HAMPP81172 84 aa9.53□□□□□ -0.88
SHOX2-205ENST00000490689 PIK3CD-AS1Q5SR53 167 aa9.53□□□□□ -0.88
SHOX2-205ENST00000490689 HIST2H2BDQ6DRA6 164 aa9.53□□□□□ -0.88
SHOX2-205ENST00000490689 NOP10Q9NPE3 64 aaKnown RBP9.53□□□□□ -0.88
SHOX2-205ENST00000490689 RNF223E7ERA6 249 aa9.53□□□□□ -0.88
SHOX2-205ENST00000490689 IGF2-ASQ6U949 168 aa9.53□□□□□ -0.88
SHOX2-205ENST00000490689 C14orf132Q9NPU4 83 aa9.53□□□□□ -0.88
SHOX2-205ENST00000490689 CFAP47Q6ZTR5 3102 aa9.53□□□□□ -0.88
SHOX2-205ENST00000490689 LECT2O14960 151 aa9.52□□□□□ -0.89
SHOX2-205ENST00000490689 NSUN5P1Q3KNT7 163 aa9.52□□□□□ -0.89
SHOX2-205ENST00000490689 SDIM1Q6ZPB5 146 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms