RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 TRAV8-2A0A0B4J237 113 aa10.72□□□□□ -0.69
ARHGEF39-205ENST00000490638 LGALS9BQ3B8N2 356 aa10.72□□□□□ -0.69
ARHGEF39-205ENST00000490638 LGALS9CQ6DKI2 356 aa10.72□□□□□ -0.69
ARHGEF39-205ENST00000490638 ZNF479Q96JC4 524 aa10.72□□□□□ -0.69
ARHGEF39-205ENST00000490638 PGPEP1Q9NXJ5 209 aa10.71□□□□□ -0.69
ARHGEF39-205ENST00000490638 A0A0J9YXV3 536 aa10.71□□□□□ -0.7
ARHGEF39-205ENST00000490638 IGHV4-30-4P0DP06 118 aa10.71□□□□□ -0.7
ARHGEF39-205ENST00000490638 CRIP2P52943 208 aaPredicted RBP10.71□□□□□ -0.7
ARHGEF39-205ENST00000490638 MLST8Q9BVC4 326 aa10.71□□□□□ -0.7
ARHGEF39-205ENST00000490638 EDA2RQ9HAV5 297 aa10.71□□□□□ -0.7
ARHGEF39-205ENST00000490638 RPL39P62891 51 aaKnown RBP10.7□□□□□ -0.7
ARHGEF39-205ENST00000490638 CAMK2N2Q96S95 79 aa10.7□□□□□ -0.7
ARHGEF39-205ENST00000490638 ZNF747Q9BV97 191 aa10.7□□□□□ -0.7
ARHGEF39-205ENST00000490638 TM2D2Q9BX73 214 aa10.7□□□□□ -0.7
ARHGEF39-205ENST00000490638 J3QQQ9 107 aa10.7□□□□□ -0.7
ARHGEF39-205ENST00000490638 C16orf95Q9H693 158 aa10.7□□□□□ -0.7
ARHGEF39-205ENST00000490638 MAP1AP78559 2803 aaPredicted RBP10.7□□□□□ -0.7
ARHGEF39-205ENST00000490638 COX7A2LO14548 114 aa10.7□□□□□ -0.7
ARHGEF39-205ENST00000490638 DKK2Q9UBU2 259 aa10.7□□□□□ -0.7
ARHGEF39-205ENST00000490638 DCANP1Q8TF63 244 aa10.7□□□□□ -0.7
ARHGEF39-205ENST00000490638 CHD6Q8TD26 2715 aa10.7□□□□□ -0.7
ARHGEF39-205ENST00000490638 PROK1P58294 105 aa10.69□□□□□ -0.7
ARHGEF39-205ENST00000490638 PCSK5Q92824 1860 aa10.69□□□□□ -0.7
ARHGEF39-205ENST00000490638 AGRNO00468 2067 aa10.69□□□□□ -0.7
ARHGEF39-205ENST00000490638 KIR2DL5BA0A0G2JN68 375 aa10.69□□□□□ -0.7
ARHGEF39-205ENST00000490638 KIR2DL5BA0A0G2JPC4 375 aa10.69□□□□□ -0.7
ARHGEF39-205ENST00000490638 MPV17L2Q567V2 206 aa10.69□□□□□ -0.7
ARHGEF39-205ENST00000490638 KIR2DL5AQ8N109 375 aa10.69□□□□□ -0.7
ARHGEF39-205ENST00000490638 KIR2DL5BQ8NHK3 375 aa10.69□□□□□ -0.7
ARHGEF39-205ENST00000490638 P0DMU3 169 aa10.68□□□□□ -0.7
ARHGEF39-205ENST00000490638 FAM231AP0DMU4 169 aa10.68□□□□□ -0.7
ARHGEF39-205ENST00000490638 FAM231CP0DMU5 169 aa10.68□□□□□ -0.7
ARHGEF39-205ENST00000490638 SCGB1A1P11684 91 aa10.68□□□□□ -0.7
ARHGEF39-205ENST00000490638 ODF3L2Q3SX64 289 aa10.68□□□□□ -0.7
ARHGEF39-205ENST00000490638 Q6ZWC4 215 aa10.68□□□□□ -0.7
ARHGEF39-205ENST00000490638 MRPL52Q86TS9 123 aaKnown RBP10.68□□□□□ -0.7
ARHGEF39-205ENST00000490638 NAA38Q9BRA0 125 aaKnown RBP10.68□□□□□ -0.7
ARHGEF39-205ENST00000490638 IGLV1-51P01701 117 aa10.68□□□□□ -0.7
ARHGEF39-205ENST00000490638 IGLV2-8P01709 118 aa10.68□□□□□ -0.7
ARHGEF39-205ENST00000490638 FRMD6-AS1P0C7T7 363 aa10.68□□□□□ -0.7
ARHGEF39-205ENST00000490638 EDN2P20800 178 aa10.68□□□□□ -0.7
ARHGEF39-205ENST00000490638 IGHV4-28A0A0C4DH34 117 aa10.68□□□□□ -0.7
ARHGEF39-205ENST00000490638 UBE2BP63146 152 aa10.68□□□□□ -0.7
ARHGEF39-205ENST00000490638 RNF183Q96D59 192 aa10.67□□□□□ -0.7
ARHGEF39-205ENST00000490638 UBE2V1Q13404 147 aa10.67□□□□□ -0.7
ARHGEF39-205ENST00000490638 STAB1Q9NY15 2570 aa10.67□□□□□ -0.7
ARHGEF39-205ENST00000490638 Q9H8V8 135 aa10.66□□□□□ -0.7
ARHGEF39-205ENST00000490638 LOC400499M0QZD8 3231 aa10.66□□□□□ -0.7
ARHGEF39-205ENST00000490638 SLC25A29Q8N8R3 303 aa10.66□□□□□ -0.7
ARHGEF39-205ENST00000490638 ZNF580Q9UK33 172 aa10.66□□□□□ -0.7
ARHGEF39-205ENST00000490638 LAMTOR3Q9UHA4 124 aa10.65□□□□□ -0.7
ARHGEF39-205ENST00000490638 IGLC6P0CF74 106 aa10.65□□□□□ -0.7
ARHGEF39-205ENST00000490638 F8WEM9 126 aa10.65□□□□□ -0.7
ARHGEF39-205ENST00000490638 PRM2P04554 102 aa10.65□□□□□ -0.7
ARHGEF39-205ENST00000490638 TSPAN13O95857 204 aa10.64□□□□□ -0.71
ARHGEF39-205ENST00000490638 TRAV10A0A0B4J240 114 aa10.64□□□□□ -0.71
ARHGEF39-205ENST00000490638 ATXN8Q156A1 80 aa10.64□□□□□ -0.71
ARHGEF39-205ENST00000490638 COA6Q5JTJ3 125 aaKnown RBP10.64□□□□□ -0.71
ARHGEF39-205ENST00000490638 C20orf203Q8NBC4 194 aa10.64□□□□□ -0.71
ARHGEF39-205ENST00000490638 CRIP1P50238 77 aa10.64□□□□□ -0.71
ARHGEF39-205ENST00000490638 BOD1L2Q8IYS8 172 aa10.63□□□□□ -0.71
ARHGEF39-205ENST00000490638 GAGE2EQ4V326 116 aa10.63□□□□□ -0.71
ARHGEF39-205ENST00000490638 SAMD5Q5TGI4 173 aa10.63□□□□□ -0.71
ARHGEF39-205ENST00000490638 GAGE2DQ9UEU5 116 aa10.63□□□□□ -0.71
ARHGEF39-205ENST00000490638 A0A1B0GV72 72 aa10.63□□□□□ -0.71
ARHGEF39-205ENST00000490638 CCL25O15444 150 aa10.62□□□□□ -0.71
ARHGEF39-205ENST00000490638 BRI3O95415 125 aa10.62□□□□□ -0.71
ARHGEF39-205ENST00000490638 RPL18AQ02543 176 aaKnown RBP10.62□□□□□ -0.71
ARHGEF39-205ENST00000490638 C10orf126Q8N4M7 172 aa10.62□□□□□ -0.71
ARHGEF39-205ENST00000490638 GTSF1LQ9H1H1 148 aa10.62□□□□□ -0.71
ARHGEF39-205ENST00000490638 KLLNB2CW77 178 aa10.61□□□□□ -0.71
ARHGEF39-205ENST00000490638 CEMP1Q6PRD7 247 aaPredicted RBP10.61□□□□□ -0.71
ARHGEF39-205ENST00000490638 COX11Q9Y6N1 276 aa10.61□□□□□ -0.71
ARHGEF39-205ENST00000490638 BAHCC1Q9P281 2608 aa10.6□□□□□ -0.71
ARHGEF39-205ENST00000490638 SPAG11BQ08648 103 aa10.6□□□□□ -0.71
ARHGEF39-205ENST00000490638 ZFAND6Q6FIF0 208 aa10.6□□□□□ -0.71
ARHGEF39-205ENST00000490638 LINC00173Q6ZV60 143 aa10.6□□□□□ -0.71
ARHGEF39-205ENST00000490638 PRR9Q5T870 116 aa10.6□□□□□ -0.71
ARHGEF39-205ENST00000490638 CFAP126Q5VTH2 177 aa10.6□□□□□ -0.71
ARHGEF39-205ENST00000490638 TIMM17AQ99595 171 aa10.6□□□□□ -0.71
ARHGEF39-205ENST00000490638 MUC4Q99102 2169 aa10.6□□□□□ -0.71
ARHGEF39-205ENST00000490638 IGLC3P0DOY3 106 aa10.59□□□□□ -0.71
ARHGEF39-205ENST00000490638 NDUFA1O15239 70 aa10.59□□□□□ -0.71
ARHGEF39-205ENST00000490638 PKIGQ9Y2B9 76 aa10.59□□□□□ -0.71
ARHGEF39-205ENST00000490638 LINC00269Q8N2A0 174 aa10.59□□□□□ -0.71
ARHGEF39-205ENST00000490638 OPRPNQ99935 248 aaPredicted RBP10.59□□□□□ -0.71
ARHGEF39-205ENST00000490638 IGSF10Q6WRI0 2623 aa10.59□□□□□ -0.71
ARHGEF39-205ENST00000490638 TRBV6-4A0A1B0GX49 114 aa10.58□□□□□ -0.72
ARHGEF39-205ENST00000490638 IGLV2-11P01706 119 aa10.58□□□□□ -0.72
ARHGEF39-205ENST00000490638 GAGE2BQ13066 116 aa10.58□□□□□ -0.72
ARHGEF39-205ENST00000490638 SCRT2Q9NQ03 307 aa10.58□□□□□ -0.72
ARHGEF39-205ENST00000490638 AKAP13Q12802 2813 aa10.58□□□□□ -0.72
ARHGEF39-205ENST00000490638 KPRPQ5T749 579 aaPredicted RBP10.58□□□□□ -0.72
ARHGEF39-205ENST00000490638 TMEM126AQ9H061 195 aa10.58□□□□□ -0.72
ARHGEF39-205ENST00000490638 TRAV8-3A0A0A6YYJ7 113 aa10.58□□□□□ -0.72
ARHGEF39-205ENST00000490638 A0A1B0GXF2 115 aa10.58□□□□□ -0.72
ARHGEF39-205ENST00000490638 NUPR1O60356 82 aa10.58□□□□□ -0.72
ARHGEF39-205ENST00000490638 CRYGDP07320 174 aa10.57□□□□□ -0.72
ARHGEF39-205ENST00000490638 TDRG1Q3Y452 100 aa10.57□□□□□ -0.72
ARHGEF39-205ENST00000490638 C11orf21Q9P2W6 132 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms