RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 MIFP14174 115 aa6.72□□□□□ -1.33
LSAMP-205ENST00000490035 U3KQK5 164 aa6.72□□□□□ -1.33
LSAMP-205ENST00000490035 WFDC2Q14508 124 aa6.72□□□□□ -1.33
LSAMP-205ENST00000490035 MSRB1Q9NZV6 116 aa6.72□□□□□ -1.33
LSAMP-205ENST00000490035 IGLC6P0CF74 106 aa6.72□□□□□ -1.33
LSAMP-205ENST00000490035 Q6ZUT4 128 aa6.72□□□□□ -1.33
LSAMP-205ENST00000490035 LINC01548A6NM66 108 aa6.72□□□□□ -1.33
LSAMP-205ENST00000490035 NFE4Q86UQ8 179 aa6.72□□□□□ -1.33
LSAMP-205ENST00000490035 PRR15LQ9BU68 103 aa6.72□□□□□ -1.33
LSAMP-205ENST00000490035 TRBV30A0A0K0K1B3 111 aa6.72□□□□□ -1.33
LSAMP-205ENST00000490035 C14orf132Q9NPU4 83 aa6.72□□□□□ -1.33
LSAMP-205ENST00000490035 IGLV10-54A0A075B6I4 117 aa6.71□□□□□ -1.33
LSAMP-205ENST00000490035 SONP18583 2426 aaKnown RBP6.71□□□□□ -1.33
LSAMP-205ENST00000490035 MRGPRG-AS1Q2M3A8 158 aa6.71□□□□□ -1.33
LSAMP-205ENST00000490035 TRBV6-4A0A1B0GX49 114 aa6.71□□□□□ -1.34
LSAMP-205ENST00000490035 C5orf47Q569G3 176 aa6.71□□□□□ -1.34
LSAMP-205ENST00000490035 NEXN-AS1Q8NBZ9 246 aa6.71□□□□□ -1.34
LSAMP-205ENST00000490035 UPK3BQ9BT76 320 aa6.71□□□□□ -1.34
LSAMP-205ENST00000490035 IGKV1D-37A0A075B6S9 117 aa6.71□□□□□ -1.34
LSAMP-205ENST00000490035 TRBV6-5A0A0K0K1A5 114 aa6.71□□□□□ -1.34
LSAMP-205ENST00000490035 KLK12Q9UKR0 248 aa6.71□□□□□ -1.34
LSAMP-205ENST00000490035 K7ERS5 55 aa6.71□□□□□ -1.34
LSAMP-205ENST00000490035 TP73-AS1Q9UF72 201 aa6.71□□□□□ -1.34
LSAMP-205ENST00000490035 COL4A3Q01955 1670 aa6.71□□□□□ -1.34
LSAMP-205ENST00000490035 K7EQG2 157 aa6.7□□□□□ -1.34
LSAMP-205ENST00000490035 IGHV3-30P01768 117 aa6.7□□□□□ -1.34
LSAMP-205ENST00000490035 IGHV3-33P01772 117 aa6.7□□□□□ -1.34
LSAMP-205ENST00000490035 IGHV3-30-5P0DP03 117 aa6.7□□□□□ -1.34
LSAMP-205ENST00000490035 SPRNQ5BIV9 151 aa6.7□□□□□ -1.34
LSAMP-205ENST00000490035 HILS1P60008 231 aa6.7□□□□□ -1.34
LSAMP-205ENST00000490035 IGKV3D-7A0A0C4DH55 119 aa6.7□□□□□ -1.34
LSAMP-205ENST00000490035 Q6YL49 198 aa6.7□□□□□ -1.34
LSAMP-205ENST00000490035 C11orf45Q8TAV5 145 aa6.7□□□□□ -1.34
LSAMP-205ENST00000490035 PRAC2D3DTV9 90 aa6.7□□□□□ -1.34
LSAMP-205ENST00000490035 CUL9Q8IWT3 2517 aa6.7□□□□□ -1.34
LSAMP-205ENST00000490035 ZFP36P26651 326 aaKnown RBP6.7□□□□□ -1.34
LSAMP-205ENST00000490035 SS18L2Q9UHA2 77 aa6.7□□□□□ -1.34
LSAMP-205ENST00000490035 GRNP28799 593 aaKnown RBP6.69□□□□□ -1.34
LSAMP-205ENST00000490035 EIF4EBP1Q13541 118 aaPredicted RBP6.69□□□□□ -1.34
LSAMP-205ENST00000490035 TDRG1Q3Y452 100 aa6.69□□□□□ -1.34
LSAMP-205ENST00000490035 ZNF706Q9Y5V0 76 aaPredicted RBP6.69□□□□□ -1.34
LSAMP-205ENST00000490035 TMEM223A0PJW6 202 aa6.69□□□□□ -1.34
LSAMP-205ENST00000490035 REG3AQ06141 175 aa6.69□□□□□ -1.34
LSAMP-205ENST00000490035 PLA2G2EQ9NZK7 142 aa6.69□□□□□ -1.34
LSAMP-205ENST00000490035 TRBV27A0A0K0K1C4 114 aa6.69□□□□□ -1.34
LSAMP-205ENST00000490035 NUPR1O60356 82 aa6.69□□□□□ -1.34
LSAMP-205ENST00000490035 LINC00173Q6ZV60 143 aa6.69□□□□□ -1.34
LSAMP-205ENST00000490035 MRPS36P82909 103 aaKnown RBP6.68□□□□□ -1.34
LSAMP-205ENST00000490035 MRPL55Q7Z7F7 128 aaKnown RBP6.68□□□□□ -1.34
LSAMP-205ENST00000490035 TCL1BO95988 128 aa6.68□□□□□ -1.34
LSAMP-205ENST00000490035 NCR3O14931 201 aa6.68□□□□□ -1.34
LSAMP-205ENST00000490035 DEFB135Q30KP9 77 aa6.68□□□□□ -1.34
LSAMP-205ENST00000490035 H0Y9J4 135 aa6.68□□□□□ -1.34
LSAMP-205ENST00000490035 NDUFV3P56181 108 aaKnown RBP6.68□□□□□ -1.34
LSAMP-205ENST00000490035 E7EUB6 86 aa6.68□□□□□ -1.34
LSAMP-205ENST00000490035 IGHV4-4A0A075B6R2 117 aa6.67□□□□□ -1.34
LSAMP-205ENST00000490035 DNAJC9-AS1A6NH13 148 aa6.67□□□□□ -1.34
LSAMP-205ENST00000490035 DHRS4-AS1Q9P1J3 65 aa6.67□□□□□ -1.34
LSAMP-205ENST00000490035 LMO4P61968 165 aa6.67□□□□□ -1.34
LSAMP-205ENST00000490035 CCDC140Q96MF4 163 aa6.67□□□□□ -1.34
LSAMP-205ENST00000490035 PRORYQ9H606 182 aa6.67□□□□□ -1.34
LSAMP-205ENST00000490035 CLEC2BQ92478 149 aa6.67□□□□□ -1.34
LSAMP-205ENST00000490035 UNQ9165/PRO28630Q6UXU0 137 aa6.67□□□□□ -1.34
LSAMP-205ENST00000490035 MBD6Q96DN6 1003 aa6.67□□□□□ -1.34
LSAMP-205ENST00000490035 IGHV4-28A0A0C4DH34 117 aa6.67□□□□□ -1.34
LSAMP-205ENST00000490035 DEFB114Q30KQ6 69 aa6.67□□□□□ -1.34
LSAMP-205ENST00000490035 TRBV6-8A0A0A6YYG3 113 aa6.67□□□□□ -1.34
LSAMP-205ENST00000490035 LY6LH3BQJ8 138 aa6.66□□□□□ -1.34
LSAMP-205ENST00000490035 IGLV2-8P01709 118 aa6.66□□□□□ -1.34
LSAMP-205ENST00000490035 USP17L23D6RBM5 183 aa6.66□□□□□ -1.34
LSAMP-205ENST00000490035 ASPHD1Q5U4P2 390 aa6.66□□□□□ -1.34
LSAMP-205ENST00000490035 CLUHP3Q96NS8 147 aa6.66□□□□□ -1.34
LSAMP-205ENST00000490035 LINC00474Q9P2X8 69 aa6.66□□□□□ -1.34
LSAMP-205ENST00000490035 NDUFC2-KCTD14E9PQ53 114 aa6.65□□□□□ -1.34
LSAMP-205ENST00000490035 IGLV4-3A0A075B6K6 122 aa6.65□□□□□ -1.34
LSAMP-205ENST00000490035 CASC2Q6XLA1 102 aa6.65□□□□□ -1.34
LSAMP-205ENST00000490035 PSMG3-AS1Q96PY0 264 aa6.65□□□□□ -1.34
LSAMP-205ENST00000490035 M0QY20 66 aa6.65□□□□□ -1.35
LSAMP-205ENST00000490035 LINC00308Q8TCZ7 52 aa6.65□□□□□ -1.35
LSAMP-205ENST00000490035 CNFNQ9BYD5 112 aa6.65□□□□□ -1.35
LSAMP-205ENST00000490035 CDPF1Q6NVV7 123 aa6.65□□□□□ -1.35
LSAMP-205ENST00000490035 DAND5Q8N907 189 aa6.65□□□□□ -1.35
LSAMP-205ENST00000490035 F8WDY8 70 aa6.64□□□□□ -1.35
LSAMP-205ENST00000490035 IGKV4-1P06312 121 aa6.64□□□□□ -1.35
LSAMP-205ENST00000490035 LINC00269Q8N2A0 174 aa6.64□□□□□ -1.35
LSAMP-205ENST00000490035 C3orf22Q8N5N4 141 aa6.64□□□□□ -1.35
LSAMP-205ENST00000490035 FAM110AQ9BQ89 295 aa6.64□□□□□ -1.35
LSAMP-205ENST00000490035 Q8NA96 180 aa6.64□□□□□ -1.35
LSAMP-205ENST00000490035 CHCHD10Q8WYQ3 142 aaPredicted RBP6.64□□□□□ -1.35
LSAMP-205ENST00000490035 ZFAND3Q9H8U3 227 aa6.64□□□□□ -1.35
LSAMP-205ENST00000490035 SHISA2Q6UWI4 295 aa6.64□□□□□ -1.35
LSAMP-205ENST00000490035 CRYGDP07320 174 aa6.64□□□□□ -1.35
LSAMP-205ENST00000490035 RS1O15537 224 aa6.64□□□□□ -1.35
LSAMP-205ENST00000490035 CFAP126Q5VTH2 177 aa6.64□□□□□ -1.35
LSAMP-205ENST00000490035 FAM236DA0A1B0GTK5 79 aa6.64□□□□□ -1.35
LSAMP-205ENST00000490035 FAM236CP0DP71 79 aa6.64□□□□□ -1.35
LSAMP-205ENST00000490035 LINC00467Q9BRT7 94 aa6.64□□□□□ -1.35
LSAMP-205ENST00000490035 CD164L2Q6UWJ8 174 aa6.63□□□□□ -1.35
LSAMP-205ENST00000490035 IGHV4-31P0DP07 118 aa6.63□□□□□ -1.35
LSAMP-205ENST00000490035 C7orf33Q8WU49 177 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms