RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 VAX2Q9UIW0 290 aa4.65□□□□□ -1.67
COL9A1-209ENST00000489861 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.64□□□□□ -1.67
COL9A1-209ENST00000489861 PANO1I0J062 215 aa4.64□□□□□ -1.67
COL9A1-209ENST00000489861 EIF4EBP3O60516 100 aaPredicted RBP4.64□□□□□ -1.67
COL9A1-209ENST00000489861 ANGP03950 147 aaKnown RBP4.64□□□□□ -1.67
COL9A1-209ENST00000489861 GZMBP10144 247 aa4.64□□□□□ -1.67
COL9A1-209ENST00000489861 BLOC1S1P78537 153 aa4.64□□□□□ -1.67
COL9A1-209ENST00000489861 CENPWQ5EE01 88 aa4.64□□□□□ -1.67
COL9A1-209ENST00000489861 WDR73Q6P4I2 378 aa4.64□□□□□ -1.67
COL9A1-209ENST00000489861 FER1L6-AS1Q8NA97 138 aa4.64□□□□□ -1.67
COL9A1-209ENST00000489861 CHCHD5Q9BSY4 110 aa4.64□□□□□ -1.67
COL9A1-209ENST00000489861 JPT2Q9H910 190 aa4.64□□□□□ -1.67
COL9A1-209ENST00000489861 MED9Q9NWA0 146 aa4.64□□□□□ -1.67
COL9A1-209ENST00000489861 TRAV8-4A0A0B4J246 113 aa4.63□□□□□ -1.67
COL9A1-209ENST00000489861 IGHV1-24A0A0C4DH33 117 aa4.63□□□□□ -1.67
COL9A1-209ENST00000489861 HLA-DQA1P01909 254 aa4.63□□□□□ -1.67
COL9A1-209ENST00000489861 BCL2P10415 239 aa4.63□□□□□ -1.67
COL9A1-209ENST00000489861 AKAP14Q86UN6 197 aa4.63□□□□□ -1.67
COL9A1-209ENST00000489861 C15orf54Q8N8G6 183 aa4.63□□□□□ -1.67
COL9A1-209ENST00000489861 NEXN-AS1Q8NBZ9 246 aa4.63□□□□□ -1.67
COL9A1-209ENST00000489861 OR2D3Q8NGH3 330 aa4.63□□□□□ -1.67
COL9A1-209ENST00000489861 OR10AG1Q8NH19 301 aa4.63□□□□□ -1.67
COL9A1-209ENST00000489861 TPPP3Q9BW30 176 aa4.63□□□□□ -1.67
COL9A1-209ENST00000489861 UBE2L6O14933 153 aa4.62□□□□□ -1.67
COL9A1-209ENST00000489861 MGPP08493 103 aa4.62□□□□□ -1.67
COL9A1-209ENST00000489861 TEX261Q6UWH6 196 aa4.62□□□□□ -1.67
COL9A1-209ENST00000489861 BORCS7Q96B45 105 aa4.62□□□□□ -1.67
COL9A1-209ENST00000489861 FAM210AQ96ND0 272 aa4.62□□□□□ -1.67
COL9A1-209ENST00000489861 DERL1Q9BUN8 251 aa4.62□□□□□ -1.67
COL9A1-209ENST00000489861 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.62□□□□□ -1.67
COL9A1-209ENST00000489861 C19orf71A6NCJ1 209 aa4.61□□□□□ -1.67
COL9A1-209ENST00000489861 TMEM250H0YL14 139 aa4.61□□□□□ -1.67
COL9A1-209ENST00000489861 NDUFS6O75380 124 aaKnown RBP4.61□□□□□ -1.67
COL9A1-209ENST00000489861 CFAP161Q6P656 301 aa4.61□□□□□ -1.67
COL9A1-209ENST00000489861 RASL11AQ6T310 242 aa4.61□□□□□ -1.67
COL9A1-209ENST00000489861 RNF185Q96GF1 192 aa4.61□□□□□ -1.67
COL9A1-209ENST00000489861 USP17L23D6RBM5 183 aa4.6□□□□□ -1.67
COL9A1-209ENST00000489861 IGLC6P0CF74 106 aa4.6□□□□□ -1.67
COL9A1-209ENST00000489861 IQCJQ1A5X6 159 aa4.6□□□□□ -1.67
COL9A1-209ENST00000489861 MPV17L2Q567V2 206 aa4.6□□□□□ -1.67
COL9A1-209ENST00000489861 C9orf62Q8N4C0 152 aa4.6□□□□□ -1.67
COL9A1-209ENST00000489861 C9orf163Q8N9P6 203 aa4.6□□□□□ -1.67
COL9A1-209ENST00000489861 SVIPQ8NHG7 77 aa4.6□□□□□ -1.67
COL9A1-209ENST00000489861 PGLYRP4Q96LB8 373 aa4.6□□□□□ -1.67
COL9A1-209ENST00000489861 TMEM243Q9BU79 118 aa4.6□□□□□ -1.67
COL9A1-209ENST00000489861 RPP21Q9H633 154 aaKnown RBP4.6□□□□□ -1.67
COL9A1-209ENST00000489861 NIT2Q9NQR4 276 aa4.6□□□□□ -1.67
COL9A1-209ENST00000489861 PRR34Q9NV39 138 aa4.6□□□□□ -1.67
COL9A1-209ENST00000489861 MUC17Q685J3 4493 aa4.6□□□□□ -1.67
COL9A1-209ENST00000489861 IGHV3-64A0A075B6Q5 118 aa4.59□□□□□ -1.67
COL9A1-209ENST00000489861 A0A1B0GUV1 79 aa4.59□□□□□ -1.67
COL9A1-209ENST00000489861 RAB19A4D1S5 217 aa4.59□□□□□ -1.67
COL9A1-209ENST00000489861 A8MWL6 223 aa4.59□□□□□ -1.67
COL9A1-209ENST00000489861 M0QY20 66 aa4.59□□□□□ -1.67
COL9A1-209ENST00000489861 NTF3P20783 257 aa4.59□□□□□ -1.67
COL9A1-209ENST00000489861 CTRLP40313 264 aa4.59□□□□□ -1.67
COL9A1-209ENST00000489861 SSTP61278 116 aa4.59□□□□□ -1.67
COL9A1-209ENST00000489861 COTL1Q14019 142 aa4.59□□□□□ -1.67
COL9A1-209ENST00000489861 TWIST1Q15672 202 aa4.59□□□□□ -1.67
COL9A1-209ENST00000489861 LYZL1Q6UWQ5 148 aa4.59□□□□□ -1.67
COL9A1-209ENST00000489861 CNFNQ9BYD5 112 aa4.59□□□□□ -1.67
COL9A1-209ENST00000489861 KIF25-AS1Q9Y6Z4 181 aa4.59□□□□□ -1.67
COL9A1-209ENST00000489861 MUC21A0A0G2JKD1 596 aa4.58□□□□□ -1.68
COL9A1-209ENST00000489861 MUC21A0A140T8X8 626 aa4.58□□□□□ -1.68
COL9A1-209ENST00000489861 H7C423 109 aa4.58□□□□□ -1.68
COL9A1-209ENST00000489861 GATCO43716 136 aaKnown RBP4.58□□□□□ -1.68
COL9A1-209ENST00000489861 NCR2O95944 276 aa4.58□□□□□ -1.68
COL9A1-209ENST00000489861 PPP1R17O96001 155 aa4.58□□□□□ -1.68
COL9A1-209ENST00000489861 AMTP48728 403 aa4.58□□□□□ -1.68
COL9A1-209ENST00000489861 RBX1P62877 108 aa4.58□□□□□ -1.68
COL9A1-209ENST00000489861 REG3AQ06141 175 aa4.58□□□□□ -1.68
COL9A1-209ENST00000489861 SMAGPQ0VAQ4 97 aa4.58□□□□□ -1.68
COL9A1-209ENST00000489861 CT83Q5H943 113 aa4.58□□□□□ -1.68
COL9A1-209ENST00000489861 SUMO4Q6EEV6 95 aa4.58□□□□□ -1.68
COL9A1-209ENST00000489861 ENHOQ6UWT2 76 aa4.58□□□□□ -1.68
COL9A1-209ENST00000489861 Q6ZNX1 250 aa4.58□□□□□ -1.68
COL9A1-209ENST00000489861 FAM231DQ6ZW35 169 aa4.58□□□□□ -1.68
COL9A1-209ENST00000489861 NUDT10Q8NFP7 164 aa4.58□□□□□ -1.68
COL9A1-209ENST00000489861 C7orf33Q8WU49 177 aa4.58□□□□□ -1.68
COL9A1-209ENST00000489861 DPH3Q96FX2 82 aa4.58□□□□□ -1.68
COL9A1-209ENST00000489861 NUDT11Q96G61 164 aa4.58□□□□□ -1.68
COL9A1-209ENST00000489861 EIF5A2Q9GZV4 153 aaKnown RBP4.58□□□□□ -1.68
COL9A1-209ENST00000489861 Q9UF83 564 aa4.58□□□□□ -1.68
COL9A1-209ENST00000489861 hDV102S1A0JD36 115 aa4.57□□□□□ -1.68
COL9A1-209ENST00000489861 FAM231BA6NCW3 169 aa4.57□□□□□ -1.68
COL9A1-209ENST00000489861 NKX2-5P52952 324 aaPredicted RBP4.57□□□□□ -1.68
COL9A1-209ENST00000489861 CNBPP62633 177 aaKnown RBP4.57□□□□□ -1.68
COL9A1-209ENST00000489861 GAGE6Q13070 117 aa4.57□□□□□ -1.68
COL9A1-209ENST00000489861 AMMECR1LQ6DCA0 310 aa4.57□□□□□ -1.68
COL9A1-209ENST00000489861 LINC00269Q8N2A0 174 aa4.57□□□□□ -1.68
COL9A1-209ENST00000489861 BTF3L4Q96K17 158 aa4.57□□□□□ -1.68
COL9A1-209ENST00000489861 KRTAP4-9Q9BYQ8 210 aa4.57□□□□□ -1.68
COL9A1-209ENST00000489861 GFRA4Q9GZZ7 299 aa4.57□□□□□ -1.68
COL9A1-209ENST00000489861 LINC00474Q9P2X8 69 aa4.57□□□□□ -1.68
COL9A1-209ENST00000489861 ZNF25P17030 456 aaPredicted RBP4.56□□□□□ -1.68
COL9A1-209ENST00000489861 FOXA3P55318 350 aaPredicted RBP4.56□□□□□ -1.68
COL9A1-209ENST00000489861 FAM74A3Q4VXF1 159 aa4.56□□□□□ -1.68
COL9A1-209ENST00000489861 ALKAL2Q6UX46 152 aa4.56□□□□□ -1.68
COL9A1-209ENST00000489861 LYPD6BQ8NI32 183 aa4.56□□□□□ -1.68
COL9A1-209ENST00000489861 OCC1Q8TAD7 63 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms