RNA–Protein interactions for RNA: ENST00000489695.1

HOXA9-205, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-205ENST00000489695 TMEM250H0YL14 139 aa14.26□□□□□ -0.13
HOXA9-205ENST00000489695 CRPP02741 224 aa14.26□□□□□ -0.13
HOXA9-205ENST00000489695 ALKAL2Q6UX46 152 aa14.26□□□□□ -0.13
HOXA9-205ENST00000489695 SDIM1Q6ZPB5 146 aa14.26□□□□□ -0.13
HOXA9-205ENST00000489695 C15orf54Q8N8G6 183 aa14.26□□□□□ -0.13
HOXA9-205ENST00000489695 ANGP03950 147 aaKnown RBP14.25□□□□□ -0.13
HOXA9-205ENST00000489695 RASL11AQ6T310 242 aa14.25□□□□□ -0.13
HOXA9-205ENST00000489695 DPH3P1Q9H4G8 78 aa14.25□□□□□ -0.13
HOXA9-205ENST00000489695 RPP21Q9H633 154 aaKnown RBP14.25□□□□□ -0.13
HOXA9-205ENST00000489695 PRR34Q9NV39 138 aa14.25□□□□□ -0.13
HOXA9-205ENST00000489695 HLA-DQA1P01909 254 aa14.24□□□□□ -0.13
HOXA9-205ENST00000489695 RBX1P62877 108 aa14.24□□□□□ -0.13
HOXA9-205ENST00000489695 MIAQ16674 131 aa14.24□□□□□ -0.13
HOXA9-205ENST00000489695 RNASE7Q9H1E1 156 aaKnown RBP14.24□□□□□ -0.13
HOXA9-205ENST00000489695 IGHV1-24A0A0C4DH33 117 aa14.23□□□□□ -0.13
HOXA9-205ENST00000489695 NIT2Q9NQR4 276 aa14.23□□□□□ -0.13
HOXA9-205ENST00000489695 GAGE6Q13070 117 aa14.22□□□□□ -0.13
HOXA9-205ENST00000489695 CIRBPQ14011 172 aaKnown RBP14.22□□□□□ -0.13
HOXA9-205ENST00000489695 NDUFS6O75380 124 aaKnown RBP14.21□□□□□ -0.13
HOXA9-205ENST00000489695 KRTAP26-1Q6PEX3 210 aa14.21□□□□□ -0.13
HOXA9-205ENST00000489695 PGLYRP4Q96LB8 373 aa14.21□□□□□ -0.13
HOXA9-205ENST00000489695 TWIST1Q15672 202 aa14.2□□□□□ -0.14
HOXA9-205ENST00000489695 FAM231DQ6ZW35 169 aa14.2□□□□□ -0.14
HOXA9-205ENST00000489695 GTSF1Q8WW33 167 aa14.2□□□□□ -0.14
HOXA9-205ENST00000489695 LINC00269Q8N2A0 174 aa14.19□□□□□ -0.14
HOXA9-205ENST00000489695 A0A1B0GUV1 79 aa14.18□□□□□ -0.14
HOXA9-205ENST00000489695 CLRN3Q8NCR9 226 aa14.17□□□□□ -0.14
HOXA9-205ENST00000489695 TMEM243Q9BU79 118 aa14.17□□□□□ -0.14
HOXA9-205ENST00000489695 GATCO43716 136 aaKnown RBP14.16□□□□□ -0.14
HOXA9-205ENST00000489695 FOXA3P55318 350 aaPredicted RBP14.16□□□□□ -0.14
HOXA9-205ENST00000489695 CNBPP62633 177 aaKnown RBP14.16□□□□□ -0.14
HOXA9-205ENST00000489695 TEX261Q6UWH6 196 aa14.16□□□□□ -0.14
HOXA9-205ENST00000489695 GATD1Q8NB37 220 aa14.16□□□□□ -0.14
HOXA9-205ENST00000489695 C20orf203Q8NBC4 194 aa14.16□□□□□ -0.14
HOXA9-205ENST00000489695 IFITM2Q01629 132 aa14.15□□□□□ -0.14
HOXA9-205ENST00000489695 CT83Q5H943 113 aa14.15□□□□□ -0.14
HOXA9-205ENST00000489695 A8MWL6 223 aa14.14□□□□□ -0.15
HOXA9-205ENST00000489695 REG3AQ06141 175 aa14.14□□□□□ -0.15
HOXA9-205ENST00000489695 COTL1Q14019 142 aa14.13□□□□□ -0.15
HOXA9-205ENST00000489695 CLPSL2Q6UWE3 100 aa14.13□□□□□ -0.15
HOXA9-205ENST00000489695 RNF185Q96GF1 192 aa14.13□□□□□ -0.15
HOXA9-205ENST00000489695 FAM210AQ96ND0 272 aa14.13□□□□□ -0.15
HOXA9-205ENST00000489695 IGLV4-60A0A075B6I1 120 aa14.12□□□□□ -0.15
HOXA9-205ENST00000489695 TRAV8-4A0A0B4J246 113 aa14.12□□□□□ -0.15
HOXA9-205ENST00000489695 SMIM15Q7Z3B0 74 aa14.12□□□□□ -0.15
HOXA9-205ENST00000489695 EIF5A2Q9GZV4 153 aaKnown RBP14.12□□□□□ -0.15
HOXA9-205ENST00000489695 A0A087WYN8 130 aa14.11□□□□□ -0.15
HOXA9-205ENST00000489695 TRAV26-2A0A0B4J265 109 aa14.11□□□□□ -0.15
HOXA9-205ENST00000489695 CEBPGP53567 150 aa14.11□□□□□ -0.15
HOXA9-205ENST00000489695 LINC01551Q86U37 167 aa14.11□□□□□ -0.15
HOXA9-205ENST00000489695 SMIM7Q9BQ49 75 aa14.11□□□□□ -0.15
HOXA9-205ENST00000489695 AMTP48728 403 aa14.1□□□□□ -0.15
HOXA9-205ENST00000489695 GFRA4Q9GZZ7 299 aa14.1□□□□□ -0.15
HOXA9-205ENST00000489695 IGHV3-64A0A075B6Q5 118 aa14.09□□□□□ -0.15
HOXA9-205ENST00000489695 SRP19P09132 144 aaKnown RBP14.09□□□□□ -0.15
HOXA9-205ENST00000489695 SPACA4Q8TDM5 124 aa14.09□□□□□ -0.15
HOXA9-205ENST00000489695 RPL39LQ96EH5 51 aaKnown RBP14.09□□□□□ -0.15
HOXA9-205ENST00000489695 DPH3Q96FX2 82 aa14.09□□□□□ -0.15
HOXA9-205ENST00000489695 LINC01600Q96MT4 127 aa14.09□□□□□ -0.15
HOXA9-205ENST00000489695 hDV102S1A0JD36 115 aa14.08□□□□□ -0.16
HOXA9-205ENST00000489695 FAM231BA6NCW3 169 aa14.08□□□□□ -0.16
HOXA9-205ENST00000489695 UBE2L6O14933 153 aa14.08□□□□□ -0.16
HOXA9-205ENST00000489695 NCR2O95944 276 aa14.08□□□□□ -0.16
HOXA9-205ENST00000489695 SLPIP03973 132 aa14.08□□□□□ -0.16
HOXA9-205ENST00000489695 TSKUQ8WUA8 353 aa14.08□□□□□ -0.16
HOXA9-205ENST00000489695 OSTCQ9NRP0 149 aa14.08□□□□□ -0.16
HOXA9-205ENST00000489695 IGLV10-54A0A075B6I4 117 aa14.07□□□□□ -0.16
HOXA9-205ENST00000489695 ZNF727A8MUV8 499 aa14.07□□□□□ -0.16
HOXA9-205ENST00000489695 CHTF8P0CG12 524 aa14.07□□□□□ -0.16
HOXA9-205ENST00000489695 PLAC8Q9NZF1 115 aa14.07□□□□□ -0.16
HOXA9-205ENST00000489695 TRBV6-5A0A0K0K1A5 114 aa14.06□□□□□ -0.16
HOXA9-205ENST00000489695 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.05□□□□□ -0.16
HOXA9-205ENST00000489695 H7C423 109 aa14.05□□□□□ -0.16
HOXA9-205ENST00000489695 PHOX2AO14813 284 aa14.05□□□□□ -0.16
HOXA9-205ENST00000489695 A0A1B0GUT8 65 aa14.04□□□□□ -0.16
HOXA9-205ENST00000489695 SDHAF1A6NFY7 115 aa14.04□□□□□ -0.16
HOXA9-205ENST00000489695 HIGD1CA8MV81 97 aa14.04□□□□□ -0.16
HOXA9-205ENST00000489695 BORCS7Q96B45 105 aa14.04□□□□□ -0.16
HOXA9-205ENST00000489695 TMEM191AQ9H0A3 160 aa14.04□□□□□ -0.16
HOXA9-205ENST00000489695 AP5S1Q9NUS5 200 aa14.04□□□□□ -0.16
HOXA9-205ENST00000489695 C7orf33Q8WU49 177 aa14.03□□□□□ -0.16
HOXA9-205ENST00000489695 RAB14P61106 215 aa14.02□□□□□ -0.17
HOXA9-205ENST00000489695 ODF1Q14990 250 aa14.02□□□□□ -0.17
HOXA9-205ENST00000489695 FAM74A3Q4VXF1 159 aa14.02□□□□□ -0.17
HOXA9-205ENST00000489695 V9GYV3 84 aa14.02□□□□□ -0.17
HOXA9-205ENST00000489695 I3L3M4 83 aa14.01□□□□□ -0.17
HOXA9-205ENST00000489695 APCSP02743 223 aa14.01□□□□□ -0.17
HOXA9-205ENST00000489695 GAS8-AS1O95177 125 aa14□□□□□ -0.17
HOXA9-205ENST00000489695 TMEM241Q24JQ0 296 aa14□□□□□ -0.17
HOXA9-205ENST00000489695 ISOC2Q96AB3 205 aa14□□□□□ -0.17
HOXA9-205ENST00000489695 RAB4AP20338 218 aa13.99□□□□□ -0.17
HOXA9-205ENST00000489695 PMCHP20382 165 aa13.99□□□□□ -0.17
HOXA9-205ENST00000489695 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.98□□□□□ -0.17
HOXA9-205ENST00000489695 IGKV2-29A2NJV5 120 aaPredicted RBP13.98□□□□□ -0.17
HOXA9-205ENST00000489695 FGF6P10767 208 aa13.98□□□□□ -0.17
HOXA9-205ENST00000489695 ESDP10768 282 aa13.98□□□□□ -0.17
HOXA9-205ENST00000489695 POLR2KP53803 58 aaKnown RBP13.98□□□□□ -0.17
HOXA9-205ENST00000489695 PRR3P79522 188 aaKnown RBP13.98□□□□□ -0.17
HOXA9-205ENST00000489695 CLLU1Q5K131 121 aa13.98□□□□□ -0.17
HOXA9-205ENST00000489695 AMMECR1LQ6DCA0 310 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms