RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 TRBV25-1A0A075B6N4 114 aa4.79□□□□□ -1.64
HDLBP-243ENST00000488923 TRGV1A0A0A0MS02 117 aa4.79□□□□□ -1.64
HDLBP-243ENST00000488923 TRAV8-6A0A0B4J262 113 aa4.79□□□□□ -1.64
HDLBP-243ENST00000488923 UBE2V1Q13404 147 aa4.79□□□□□ -1.64
HDLBP-243ENST00000488923 RRN3P1Q2M238 152 aa4.79□□□□□ -1.64
HDLBP-243ENST00000488923 DAZ4Q86SG3 579 aaKnown RBP4.79□□□□□ -1.64
HDLBP-243ENST00000488923 TM2D2Q9BX73 214 aa4.79□□□□□ -1.64
HDLBP-243ENST00000488923 DAZ3Q9NR90 486 aaKnown RBP4.79□□□□□ -1.64
HDLBP-243ENST00000488923 MRPL16Q9NX20 251 aaKnown RBP4.79□□□□□ -1.64
HDLBP-243ENST00000488923 APCP25054 2843 aa4.79□□□□□ -1.64
HDLBP-243ENST00000488923 ABCA12Q86UK0 2595 aa4.79□□□□□ -1.64
HDLBP-243ENST00000488923 IGLV4-69A0A075B6H9 119 aa4.78□□□□□ -1.64
HDLBP-243ENST00000488923 TRBV7-3A0A075B6L6 115 aa4.78□□□□□ -1.64
HDLBP-243ENST00000488923 IGHV3OR16-12A0A075B7B8 117 aa4.78□□□□□ -1.64
HDLBP-243ENST00000488923 IGKV2D-26A0A0A0MRZ7 120 aa4.78□□□□□ -1.64
HDLBP-243ENST00000488923 TRBV6-4A0A1B0GX49 114 aa4.78□□□□□ -1.64
HDLBP-243ENST00000488923 SMIM9A6NGZ8 99 aa4.78□□□□□ -1.64
HDLBP-243ENST00000488923 TMEM238C9JI98 176 aa4.78□□□□□ -1.64
HDLBP-243ENST00000488923 TAX1BP3O14907 124 aa4.78□□□□□ -1.64
HDLBP-243ENST00000488923 CRLF1O75462 422 aa4.78□□□□□ -1.64
HDLBP-243ENST00000488923 SMIM13P0DJ93 91 aa4.78□□□□□ -1.64
HDLBP-243ENST00000488923 P0DMU3 169 aa4.78□□□□□ -1.64
HDLBP-243ENST00000488923 FAM231AP0DMU4 169 aa4.78□□□□□ -1.64
HDLBP-243ENST00000488923 FAM231CP0DMU5 169 aa4.78□□□□□ -1.64
HDLBP-243ENST00000488923 PTTG1IPP53801 180 aa4.78□□□□□ -1.64
HDLBP-243ENST00000488923 MRPS36P82909 103 aaKnown RBP4.78□□□□□ -1.64
HDLBP-243ENST00000488923 VAMP3Q15836 100 aa4.78□□□□□ -1.64
HDLBP-243ENST00000488923 TMEM170BQ5T4T1 132 aa4.78□□□□□ -1.64
HDLBP-243ENST00000488923 GTF2H5Q6ZYL4 71 aa4.78□□□□□ -1.64
HDLBP-243ENST00000488923 CEND1Q8N111 149 aa4.78□□□□□ -1.64
HDLBP-243ENST00000488923 PLEKHB2Q96CS7 222 aa4.78□□□□□ -1.64
HDLBP-243ENST00000488923 CITED1Q99966 193 aa4.78□□□□□ -1.64
HDLBP-243ENST00000488923 OVOL2Q9BRP0 275 aa4.78□□□□□ -1.64
HDLBP-243ENST00000488923 PRADC1Q9BSG0 188 aa4.78□□□□□ -1.64
HDLBP-243ENST00000488923 DOPEY2Q9Y3R5 2298 aa4.77□□□□□ -1.65
HDLBP-243ENST00000488923 CRYBG3Q68DQ2 2970 aa4.77□□□□□ -1.65
HDLBP-243ENST00000488923 CELSR2Q9HCU4 2923 aa4.77□□□□□ -1.65
HDLBP-243ENST00000488923 IGLV4-3A0A075B6K6 122 aa4.77□□□□□ -1.65
HDLBP-243ENST00000488923 IGHV3-73A0A0B4J1V6 119 aa4.77□□□□□ -1.65
HDLBP-243ENST00000488923 C9orf118A6NHY6 69 aa4.77□□□□□ -1.65
HDLBP-243ENST00000488923 ZNF815PA8K554 130 aa4.77□□□□□ -1.65
HDLBP-243ENST00000488923 H7C423 109 aa4.77□□□□□ -1.65
HDLBP-243ENST00000488923 K7EQD1 137 aa4.77□□□□□ -1.65
HDLBP-243ENST00000488923 GCSHP23434 173 aa4.77□□□□□ -1.65
HDLBP-243ENST00000488923 RPL39P62891 51 aaKnown RBP4.77□□□□□ -1.65
HDLBP-243ENST00000488923 SCGB1D4Q6XE38 83 aa4.77□□□□□ -1.65
HDLBP-243ENST00000488923 AMELXQ99217 191 aa4.77□□□□□ -1.65
HDLBP-243ENST00000488923 HIST1H4GQ99525 98 aa4.77□□□□□ -1.65
HDLBP-243ENST00000488923 SMR3AQ99954 134 aa4.77□□□□□ -1.65
HDLBP-243ENST00000488923 CSDC2Q9Y534 153 aaKnown RBP4.77□□□□□ -1.65
HDLBP-243ENST00000488923 MUC4Q99102 2169 aa4.77□□□□□ -1.65
HDLBP-243ENST00000488923 ITPR3Q14573 2671 aa4.76□□□□□ -1.65
HDLBP-243ENST00000488923 TRGV2A0A075B6R0 118 aa4.76□□□□□ -1.65
HDLBP-243ENST00000488923 INAFM1C9JVW0 142 aa4.76□□□□□ -1.65
HDLBP-243ENST00000488923 LEPROTO15243 131 aa4.76□□□□□ -1.65
HDLBP-243ENST00000488923 LGALS3P17931 250 aaKnown RBP4.76□□□□□ -1.65
HDLBP-243ENST00000488923 DGAT2L7PQ6IED9 249 aa4.76□□□□□ -1.65
HDLBP-243ENST00000488923 CSNK1G2-AS1Q8NCQ2 148 aa4.76□□□□□ -1.65
HDLBP-243ENST00000488923 KIR2DL5BQ8NHK3 375 aa4.76□□□□□ -1.65
HDLBP-243ENST00000488923 GTSF1LQ9H1H1 148 aa4.76□□□□□ -1.65
HDLBP-243ENST00000488923 SPANXB1Q9NS25 103 aaPredicted RBP4.76□□□□□ -1.65
HDLBP-243ENST00000488923 CELSR1Q9NYQ6 3014 aa4.75□□□□□ -1.65
HDLBP-243ENST00000488923 TINCRA0A1B0GVN0 87 aa4.75□□□□□ -1.65
HDLBP-243ENST00000488923 TMEM223A0PJW6 202 aa4.75□□□□□ -1.65
HDLBP-243ENST00000488923 J3QQQ9 107 aa4.75□□□□□ -1.65
HDLBP-243ENST00000488923 GIG44P09565 113 aaPredicted RBP4.75□□□□□ -1.65
HDLBP-243ENST00000488923 RPL35AP18077 110 aaKnown RBP4.75□□□□□ -1.65
HDLBP-243ENST00000488923 APOC4P55056 127 aa4.75□□□□□ -1.65
HDLBP-243ENST00000488923 TCTAP57738 103 aa4.75□□□□□ -1.65
HDLBP-243ENST00000488923 Q6ZSN1 163 aa4.75□□□□□ -1.65
HDLBP-243ENST00000488923 MAPKAPK5-AS1Q8N8E1 139 aa4.75□□□□□ -1.65
HDLBP-243ENST00000488923 OR5A1Q8NGJ0 315 aa4.75□□□□□ -1.65
HDLBP-243ENST00000488923 ZNRF2Q8NHG8 242 aa4.75□□□□□ -1.65
HDLBP-243ENST00000488923 CHCHD7Q9BUK0 85 aa4.75□□□□□ -1.65
HDLBP-243ENST00000488923 NOP10Q9NPE3 64 aaKnown RBP4.75□□□□□ -1.65
HDLBP-243ENST00000488923 TP73-AS1Q9UF72 201 aa4.75□□□□□ -1.65
HDLBP-243ENST00000488923 UBE2D4Q9Y2X8 147 aa4.75□□□□□ -1.65
HDLBP-243ENST00000488923 CENPEQ02224 2701 aa4.75□□□□□ -1.65
HDLBP-243ENST00000488923 TRGV4A0A0C4DH28 118 aa4.74□□□□□ -1.65
HDLBP-243ENST00000488923 GAGE12BA1L429 117 aa4.74□□□□□ -1.65
HDLBP-243ENST00000488923 GAGE10A6NGK3 116 aa4.74□□□□□ -1.65
HDLBP-243ENST00000488923 GAGE7O76087 117 aa4.74□□□□□ -1.65
HDLBP-243ENST00000488923 GAGE12FP0CL80 117 aa4.74□□□□□ -1.65
HDLBP-243ENST00000488923 GAGE12GP0CL81 117 aa4.74□□□□□ -1.65
HDLBP-243ENST00000488923 GAGE12IP0CL82 117 aa4.74□□□□□ -1.65
HDLBP-243ENST00000488923 FABP2P12104 132 aa4.74□□□□□ -1.65
HDLBP-243ENST00000488923 ZNF22P17026 224 aaPredicted RBP4.74□□□□□ -1.65
HDLBP-243ENST00000488923 TIRAPP58753 221 aa4.74□□□□□ -1.65
HDLBP-243ENST00000488923 KRTAP10-3P60369 221 aa4.74□□□□□ -1.65
HDLBP-243ENST00000488923 UBE2D3P61077 147 aa4.74□□□□□ -1.65
HDLBP-243ENST00000488923 UBE2D2P62837 147 aa4.74□□□□□ -1.65
HDLBP-243ENST00000488923 HERVK_113P63121 156 aa4.74□□□□□ -1.65
HDLBP-243ENST00000488923 SRSF9Q13242 221 aaKnown RBP eCLIP4.74□□□□□ -1.65
HDLBP-243ENST00000488923 LYRM7Q5U5X0 104 aa4.74□□□□□ -1.65
HDLBP-243ENST00000488923 HIST2H2BDQ6DRA6 164 aa4.74□□□□□ -1.65
HDLBP-243ENST00000488923 Q6ZTI0 123 aa4.74□□□□□ -1.65
HDLBP-243ENST00000488923 Q6ZVH6 145 aa4.74□□□□□ -1.65
HDLBP-243ENST00000488923 GEMIN7Q9H840 131 aaKnown RBP4.74□□□□□ -1.65
HDLBP-243ENST00000488923 TEX15Q9BXT5 2789 aa4.74□□□□□ -1.65
HDLBP-243ENST00000488923 PDZD2O15018 2839 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms