RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 AHCTF1Q8WYP5 2266 aa0.34□□□□□ -2.36
CD46-215ENST00000488596 USP24Q9UPU5 2620 aa0.34□□□□□ -2.36
CD46-215ENST00000488596 UNC13BO14795 1591 aa0.33□□□□□ -2.36
CD46-215ENST00000488596 ABCA12Q86UK0 2595 aa0.33□□□□□ -2.36
CD46-215ENST00000488596 MDN1Q9NU22 5596 aa0.33□□□□□ -2.36
CD46-215ENST00000488596 FAM208BQ5VWN6 2430 aa0.33□□□□□ -2.36
CD46-215ENST00000488596 PPIP5K1Q6PFW1 1433 aa0.33□□□□□ -2.36
CD46-215ENST00000488596 GVQW2A0A096LPI5 108 aaPredicted RBP0.33□□□□□ -2.36
CD46-215ENST00000488596 PHGR1C9JFL3 82 aa0.33□□□□□ -2.36
CD46-215ENST00000488596 F6UZH7 168 aa0.33□□□□□ -2.36
CD46-215ENST00000488596 SIX6O95475 246 aa0.33□□□□□ -2.36
CD46-215ENST00000488596 GNG4P50150 75 aa0.33□□□□□ -2.36
CD46-215ENST00000488596 SPINK7P58062 85 aa0.33□□□□□ -2.36
CD46-215ENST00000488596 TPPP2P59282 170 aa0.33□□□□□ -2.36
CD46-215ENST00000488596 C9orf153Q5TBE3 101 aa0.33□□□□□ -2.36
CD46-215ENST00000488596 MRPL54Q6P161 138 aaKnown RBP0.33□□□□□ -2.36
CD46-215ENST00000488596 PPP3R2Q96LZ3 170 aa0.33□□□□□ -2.36
CD46-215ENST00000488596 Q96NJ1 140 aa0.33□□□□□ -2.36
CD46-215ENST00000488596 SCN3BQ9NY72 215 aa0.33□□□□□ -2.36
CD46-215ENST00000488596 SCP2D1Q9UJQ7 156 aa0.33□□□□□ -2.36
CD46-215ENST00000488596 CC2D2AQ9P2K1 1620 aa0.33□□□□□ -2.36
CD46-215ENST00000488596 GOLGA3Q08378 1498 aa0.33□□□□□ -2.36
CD46-215ENST00000488596 CACNA1CQ13936 2221 aa0.33□□□□□ -2.36
CD46-215ENST00000488596 CHD9Q3L8U1 2897 aa0.32□□□□□ -2.36
CD46-215ENST00000488596 PTPRZ1P23471 2315 aaPredicted RBP0.32□□□□□ -2.36
CD46-215ENST00000488596 ZFYVE26Q68DK2 2539 aa0.32□□□□□ -2.36
CD46-215ENST00000488596 TRGV1A0A0A0MS02 117 aa0.32□□□□□ -2.36
CD46-215ENST00000488596 TRAV1-2A0A0B4J238 106 aa0.32□□□□□ -2.36
CD46-215ENST00000488596 TMEM14DPA8MWL7 114 aa0.32□□□□□ -2.36
CD46-215ENST00000488596 CORTO00230 105 aa0.32□□□□□ -2.36
CD46-215ENST00000488596 TNFP01375 233 aa0.32□□□□□ -2.36
CD46-215ENST00000488596 IFNGP01579 166 aa0.32□□□□□ -2.36
CD46-215ENST00000488596 KRTAP2-3P0C7H8 128 aa0.32□□□□□ -2.36
CD46-215ENST00000488596 SMIM6P0DI80 62 aa0.32□□□□□ -2.36
CD46-215ENST00000488596 S100A1P23297 94 aa0.32□□□□□ -2.36
CD46-215ENST00000488596 CCL18P55774 89 aa0.32□□□□□ -2.36
CD46-215ENST00000488596 C10orf128Q5T292 105 aa0.32□□□□□ -2.36
CD46-215ENST00000488596 VMO1Q7Z5L0 202 aa0.32□□□□□ -2.36
CD46-215ENST00000488596 C8orf59Q8N0T1 100 aaPredicted RBP0.32□□□□□ -2.36
CD46-215ENST00000488596 WFDC6Q9BQY6 131 aa0.32□□□□□ -2.36
CD46-215ENST00000488596 KRTAP2-4Q9BYR9 128 aa0.32□□□□□ -2.36
CD46-215ENST00000488596 KRTAP2-1Q9BYU5 128 aa0.32□□□□□ -2.36
CD46-215ENST00000488596 PLAC8Q9NZF1 115 aa0.32□□□□□ -2.36
CD46-215ENST00000488596 GNG8Q9UK08 70 aa0.32□□□□□ -2.36
CD46-215ENST00000488596 PZPP20742 1482 aa0.32□□□□□ -2.36
CD46-215ENST00000488596 MRC1P22897 1456 aa0.32□□□□□ -2.36
CD46-215ENST00000488596 IGF2RP11717 2491 aa0.32□□□□□ -2.36
CD46-215ENST00000488596 SPHKAPQ2M3C7 1700 aa0.32□□□□□ -2.36
CD46-215ENST00000488596 ABCA3Q99758 1704 aa0.32□□□□□ -2.36
CD46-215ENST00000488596 ANKRD17O75179 2603 aaKnown RBP0.32□□□□□ -2.36
CD46-215ENST00000488596 SBF2Q86WG5 1849 aa0.31□□□□□ -2.36
CD46-215ENST00000488596 WNK3Q9BYP7 1800 aa0.31□□□□□ -2.36
CD46-215ENST00000488596 ZNF236Q9UL36 1845 aa0.31□□□□□ -2.36
CD46-215ENST00000488596 PLCE1Q9P212 2302 aa0.31□□□□□ -2.36
CD46-215ENST00000488596 KIF21AQ7Z4S6 1674 aa0.31□□□□□ -2.36
CD46-215ENST00000488596 TOPAZ1Q8N9V7 1692 aa0.31□□□□□ -2.36
CD46-215ENST00000488596 TPRP12270 2363 aaKnown RBP0.31□□□□□ -2.36
CD46-215ENST00000488596 FSIP2Q5CZC0 6907 aa0.31□□□□□ -2.36
CD46-215ENST00000488596 CHD1O14646 1710 aa0.31□□□□□ -2.36
CD46-215ENST00000488596 OOSP1A8MZH6 123 aa0.31□□□□□ -2.36
CD46-215ENST00000488596 PPP1R17O96001 155 aa0.31□□□□□ -2.36
CD46-215ENST00000488596 GCHFRP30047 84 aa0.31□□□□□ -2.36
CD46-215ENST00000488596 ATP5EP56381 51 aaPredicted RBP0.31□□□□□ -2.36
CD46-215ENST00000488596 PPP3R1P63098 170 aa0.31□□□□□ -2.36
CD46-215ENST00000488596 MRPS10P82664 201 aaKnown RBP0.31□□□□□ -2.36
CD46-215ENST00000488596 Q6ZRX8 168 aa0.31□□□□□ -2.36
CD46-215ENST00000488596 COMMD6Q7Z4G1 85 aa0.31□□□□□ -2.36
CD46-215ENST00000488596 C5orf38Q86SI9 138 aa0.31□□□□□ -2.36
CD46-215ENST00000488596 BAGE3Q86Y29 109 aa0.31□□□□□ -2.36
CD46-215ENST00000488596 TTC9CQ8N5M4 171 aa0.31□□□□□ -2.36
CD46-215ENST00000488596 LENEPQ9Y5L5 61 aa0.31□□□□□ -2.36
CD46-215ENST00000488596 MAPKBP1O60336 1514 aa0.31□□□□□ -2.36
CD46-215ENST00000488596 SPTBN2O15020 2390 aa0.31□□□□□ -2.36
CD46-215ENST00000488596 MYOM1P52179 1685 aa0.3□□□□□ -2.36
CD46-215ENST00000488596 ZNF292O60281 2723 aa0.3□□□□□ -2.36
CD46-215ENST00000488596 KDM3BQ7LBC6 1761 aa0.3□□□□□ -2.36
CD46-215ENST00000488596 UBE2L5PA0A1B0GUS4 154 aa0.3□□□□□ -2.36
CD46-215ENST00000488596 SSSCA1O60232 199 aa0.3□□□□□ -2.36
CD46-215ENST00000488596 UBE2L3P68036 154 aaKnown RBP0.3□□□□□ -2.36
CD46-215ENST00000488596 WHAMMP3Q1A5X7 153 aa0.3□□□□□ -2.36
CD46-215ENST00000488596 SVBPQ8N300 66 aa0.3□□□□□ -2.36
CD46-215ENST00000488596 MYOZ3Q8TDC0 251 aa0.3□□□□□ -2.36
CD46-215ENST00000488596 SPANXDQ9BXN6 97 aa0.3□□□□□ -2.36
CD46-215ENST00000488596 CYP4F30PQ9H0H9 118 aa0.3□□□□□ -2.36
CD46-215ENST00000488596 PROK2Q9HC23 129 aa0.3□□□□□ -2.36
CD46-215ENST00000488596 IER3IP1Q9Y5U9 82 aa0.3□□□□□ -2.36
CD46-215ENST00000488596 R4GMQ9 66 aa0.3□□□□□ -2.36
CD46-215ENST00000488596 V9GYH0 126 aa0.3□□□□□ -2.36
CD46-215ENST00000488596 TOP2BQ02880 1626 aa0.3□□□□□ -2.36
CD46-215ENST00000488596 KDM5AP29375 1690 aaKnown RBP0.3□□□□□ -2.36
CD46-215ENST00000488596 LRRC37A2A6NM11 1700 aa0.3□□□□□ -2.36
CD46-215ENST00000488596 ZNF609O15014 1411 aa0.3□□□□□ -2.36
CD46-215ENST00000488596 C10orf71Q711Q0 1435 aa0.3□□□□□ -2.36
CD46-215ENST00000488596 BTAF1O14981 1849 aa0.29□□□□□ -2.36
CD46-215ENST00000488596 PLXNB2O15031 1838 aa0.29□□□□□ -2.36
CD46-215ENST00000488596 ARHGAP5Q13017 1502 aa0.29□□□□□ -2.36
CD46-215ENST00000488596 ZMYM4Q5VZL5 1548 aa0.29□□□□□ -2.36
CD46-215ENST00000488596 ARHGEF5Q12774 1597 aa0.29□□□□□ -2.36
CD46-215ENST00000488596 FAM24AA6NFZ4 105 aa0.29□□□□□ -2.36
CD46-215ENST00000488596 G3V318 75 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 140.9 ms