RNA–Protein interactions for RNA: ENST00000488117.5

C9orf72-205, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 2

Gene C9orf72, Length 4,808 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-205ENST00000488117 APOC4P55056 127 aa1.93□□□□□ -2.1
C9orf72-205ENST00000488117 RBMY1FQ15415 496 aaKnown RBP1.93□□□□□ -2.1
C9orf72-205ENST00000488117 ODF3L2Q3SX64 289 aa1.93□□□□□ -2.1
C9orf72-205ENST00000488117 UFSP1Q6NVU6 142 aa1.93□□□□□ -2.1
C9orf72-205ENST00000488117 SLC25A29Q8N8R3 303 aa1.93□□□□□ -2.1
C9orf72-205ENST00000488117 OPRPNQ99935 248 aaPredicted RBP1.93□□□□□ -2.1
C9orf72-205ENST00000488117 UBE2D4Q9Y2X8 147 aa1.93□□□□□ -2.1
C9orf72-205ENST00000488117 RPL13AP40429 203 aaKnown RBP1.93□□□□□ -2.1
C9orf72-205ENST00000488117 PCP4P48539 62 aa1.93□□□□□ -2.1
C9orf72-205ENST00000488117 HERV-K104P63124 156 aa1.93□□□□□ -2.1
C9orf72-205ENST00000488117 CHCHD5Q9BSY4 110 aa1.93□□□□□ -2.1
C9orf72-205ENST00000488117 DSPP15924 2871 aaKnown RBP1.93□□□□□ -2.1
C9orf72-205ENST00000488117 A0A0B4J2C4 111 aa1.93□□□□□ -2.1
C9orf72-205ENST00000488117 IGHV3-30P01768 117 aa1.93□□□□□ -2.1
C9orf72-205ENST00000488117 IGHV3-30-3P0DP02 117 aa1.93□□□□□ -2.1
C9orf72-205ENST00000488117 IGHV3-30-5P0DP03 117 aa1.93□□□□□ -2.1
C9orf72-205ENST00000488117 PROK1P58294 105 aa1.93□□□□□ -2.1
C9orf72-205ENST00000488117 TIRAPP58753 221 aa1.93□□□□□ -2.1
C9orf72-205ENST00000488117 RNASE13Q5GAN3 156 aaKnown RBP1.93□□□□□ -2.1
C9orf72-205ENST00000488117 Q6ZUT4 128 aa1.93□□□□□ -2.1
C9orf72-205ENST00000488117 MUSTN1Q8IVN3 82 aa1.93□□□□□ -2.1
C9orf72-205ENST00000488117 C11orf72Q8NBR9 251 aa1.93□□□□□ -2.1
C9orf72-205ENST00000488117 RNASE8Q8TDE3 154 aaKnown RBP1.93□□□□□ -2.1
C9orf72-205ENST00000488117 AMELXQ99217 191 aa1.93□□□□□ -2.1
C9orf72-205ENST00000488117 CHCHD7Q9BUK0 85 aa1.93□□□□□ -2.1
C9orf72-205ENST00000488117 ARHGAP32A7KAX9 2087 aa1.93□□□□□ -2.1
C9orf72-205ENST00000488117 PTPRQQ9UMZ3 2332 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 PKDREJQ9NTG1 2253 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 TRAV13-1A0A0B4J241 112 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 A0A0J9YXY3 114 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 TMEM262E9PQX1 116 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 TSPAN13O95857 204 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 IGLV1-51P01701 117 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 CFC1BP0CG36 223 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 CFC1P0CG37 223 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 SFTA2Q6UW10 78 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 KRTAP1-3Q8IUG1 177 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 C10orf126Q8N4M7 172 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 ATP6V0E2Q8NHE4 81 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 VSIG2Q96IQ7 327 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 GTSF1LQ9H1H1 148 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 TRBV6-4A0A1B0GX49 114 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 SMIM9A6NGZ8 99 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 G3V4G9 280 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 H3BMG7 143 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 TIMM17BO60830 172 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 SNCGO76070 127 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 MIAQ16674 131 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 Q6ZTI0 123 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 SPANXDQ9BXN6 97 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 SPANXCQ9NY87 97 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 CNOT1A5YKK6 2376 aaKnown RBP1.92□□□□□ -2.1
C9orf72-205ENST00000488117 CELSR2Q9HCU4 2923 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 MUC6Q6W4X9 2439 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 IGKV3OR2-268A0A0C4DH90 116 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 A4D1N5 150 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 UBE2D1P51668 147 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 SS18Q15532 418 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 CEMP1Q6PRD7 247 aaPredicted RBP1.92□□□□□ -2.1
C9orf72-205ENST00000488117 PRIMA1Q86XR5 153 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 C1orf158Q8N1D5 194 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 ESM1Q9NQ30 184 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 AKAP13Q12802 2813 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 COL12A1Q99715 3063 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 NDUFA1O15239 70 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 DEFB130BP0DP73 79 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 DEFB130AP0DP74 79 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 UBE2D3P61077 147 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 UBE2D2P62837 147 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 GAGE6Q13070 117 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 HIST2H2BCQ6DN03 193 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 PPDPFLQ8WWR9 84 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 OVOL2Q9BRP0 275 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 ACACAQ13085 2346 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 PLXNB1O43157 2135 aa1.92□□□□□ -2.1
C9orf72-205ENST00000488117 NPC2P61916 151 aa1.91□□□□□ -2.1
C9orf72-205ENST00000488117 ZFAND6Q6FIF0 208 aa1.91□□□□□ -2.1
C9orf72-205ENST00000488117 CFAP161Q6P656 301 aa1.91□□□□□ -2.1
C9orf72-205ENST00000488117 SIGMAR1Q99720 223 aa1.91□□□□□ -2.1
C9orf72-205ENST00000488117 CSDC2Q9Y534 153 aaKnown RBP1.91□□□□□ -2.1
C9orf72-205ENST00000488117 ANKHD1Q8IWZ3 2542 aaKnown RBP1.91□□□□□ -2.1
C9orf72-205ENST00000488117 ABCA4P78363 2273 aa1.91□□□□□ -2.1
C9orf72-205ENST00000488117 TEX48A0A1B0GUV7 120 aa1.91□□□□□ -2.1
C9orf72-205ENST00000488117 LY6G6DO95868 133 aa1.91□□□□□ -2.1
C9orf72-205ENST00000488117 TSPEAR-AS2P59090 65 aa1.91□□□□□ -2.1
C9orf72-205ENST00000488117 RBX1P62877 108 aa1.91□□□□□ -2.1
C9orf72-205ENST00000488117 Q6ZSN1 163 aa1.91□□□□□ -2.1
C9orf72-205ENST00000488117 IL17DQ8TAD2 202 aa1.91□□□□□ -2.1
C9orf72-205ENST00000488117 Q9H8V8 135 aa1.91□□□□□ -2.1
C9orf72-205ENST00000488117 TOMM7Q9P0U1 55 aa1.91□□□□□ -2.1
C9orf72-205ENST00000488117 ICOSQ9Y6W8 199 aa1.91□□□□□ -2.1
C9orf72-205ENST00000488117 POLEQ07864 2286 aa1.91□□□□□ -2.1
C9orf72-205ENST00000488117 GVINP1Q7Z2Y8 2422 aa1.91□□□□□ -2.1
C9orf72-205ENST00000488117 TRAV8-3A0A0A6YYJ7 113 aa1.91□□□□□ -2.1
C9orf72-205ENST00000488117 LYRM9A8MSI8 78 aa1.91□□□□□ -2.1
C9orf72-205ENST00000488117 CRLF1O75462 422 aa1.91□□□□□ -2.1
C9orf72-205ENST00000488117 CRPP02741 224 aa1.91□□□□□ -2.1
C9orf72-205ENST00000488117 PRM2P04554 102 aa1.91□□□□□ -2.1
C9orf72-205ENST00000488117 DAD1P61803 113 aa1.91□□□□□ -2.1
C9orf72-205ENST00000488117 C21orf62-AS1Q17RA5 79 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms