RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 GNRH2O43555 120 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 LYZL6O75951 148 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 NDUFB2O95178 105 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 APOMO95445 188 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 IGKCP01834 107 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 TRACP01848 142 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 GYPBP06028 91 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 CCKP06307 115 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 LINC00032P0C843 101 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 PYYP10082 97 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 CCL3P10147 92 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 COX8AP10176 69 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 COX6A1P12074 109 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 TPT1P13693 172 aaKnown RBP0.61□□□□□ -2.31
SMC4-220ENST00000488017 ASIPP42127 132 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 SSR2P43308 183 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 FXYD2P54710 66 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 UBE2D3P61077 147 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 FGF12P61328 243 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 DAD1P61803 113 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 SNRPFP62306 86 aaKnown RBP0.61□□□□□ -2.31
SMC4-220ENST00000488017 UBE2D2P62837 147 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 CCL20P78556 96 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 CDK5R1Q15078 307 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 KISS1Q15726 138 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 DEFB121Q5J5C9 76 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 GDF5OSQ5U4N7 250 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 PATE2Q6UY27 113 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 ZCCHC23Q6ZST2 131 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 LCA10Q71F78 164 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 LINC00305Q7Z4B0 112 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 ATP5L2Q7Z4Y8 100 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 BPIFA4PQ86YQ2 179 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 C10orf126Q8N4M7 172 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 C15orf53Q8NAA6 179 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 MORN4Q8NDC4 146 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 OR2T10Q8NGZ9 312 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 OR51H1Q8NH63 302 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 WFDC5Q8TCV5 224 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 SPACA4Q8TDM5 124 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 SMCR5Q8TEV8 140 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 H1FXQ92522 213 aaKnown RBP0.61□□□□□ -2.31
SMC4-220ENST00000488017 AQP10Q96PS8 301 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 PMCHL2Q9BQD1 86 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 BPESC1Q9GZL8 116 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 IMUPQ9GZP8 106 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 FXYD6Q9H0Q3 95 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 NAA60Q9H7X0 242 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 PRO2289Q9P1D8 64 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 RABAC1Q9UI14 185 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 HILPDAQ9Y5L2 63 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 RP1P56715 2156 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 FREM3P0C091 2139 aa0.61□□□□□ -2.31
SMC4-220ENST00000488017 USP34Q70CQ2 3546 aa0.6□□□□□ -2.31
SMC4-220ENST00000488017 AHNAKQ09666 5890 aaKnown RBP0.6□□□□□ -2.31
SMC4-220ENST00000488017 DNAJC13O75165 2243 aa0.6□□□□□ -2.31
SMC4-220ENST00000488017 TRBV7-3A0A075B6L6 115 aa0.6□□□□□ -2.31
SMC4-220ENST00000488017 TRBV7-1A0A0A6YYK4 115 aa0.6□□□□□ -2.31
SMC4-220ENST00000488017 TRBV27A0A0K0K1C4 114 aa0.6□□□□□ -2.31
SMC4-220ENST00000488017 LOC285095A0A1B0GVY8 99 aa0.6□□□□□ -2.31
SMC4-220ENST00000488017 KANTRA0A1W2PQU2 76 aa0.6□□□□□ -2.31
SMC4-220ENST00000488017 IGKV2-29A2NJV5 120 aaPredicted RBP0.6□□□□□ -2.31
SMC4-220ENST00000488017 A6NIN4 97 aa0.6□□□□□ -2.31
SMC4-220ENST00000488017 APOC4-APOC2K7ER74 178 aa0.6□□□□□ -2.31
SMC4-220ENST00000488017 COX7A2LO14548 114 aa0.6□□□□□ -2.31
SMC4-220ENST00000488017 CCL16O15467 120 aa0.6□□□□□ -2.31
SMC4-220ENST00000488017 SNCGO76070 127 aa0.6□□□□□ -2.31
SMC4-220ENST00000488017 IGLV1-51P01701 117 aa0.6□□□□□ -2.31
SMC4-220ENST00000488017 IGLV3-27P01718 113 aa0.6□□□□□ -2.31
SMC4-220ENST00000488017 APOC2P02655 101 aa0.6□□□□□ -2.31
SMC4-220ENST00000488017 GYPAP02724 150 aa0.6□□□□□ -2.31
SMC4-220ENST00000488017 FABP2P12104 132 aa0.6□□□□□ -2.31
SMC4-220ENST00000488017 PIPP12273 146 aaPredicted RBP0.6□□□□□ -2.31
SMC4-220ENST00000488017 CCL5P13501 91 aa0.6□□□□□ -2.31
SMC4-220ENST00000488017 IL9P15248 144 aa0.6□□□□□ -2.31
SMC4-220ENST00000488017 HMGA1P17096 107 aaKnown RBP0.6□□□□□ -2.31
SMC4-220ENST00000488017 SDC2P34741 201 aa0.6□□□□□ -2.31
SMC4-220ENST00000488017 CSN1S1P47710 185 aa0.6□□□□□ -2.31
SMC4-220ENST00000488017 KRTDAPP60985 99 aa0.6□□□□□ -2.31
SMC4-220ENST00000488017 NPC2P61916 151 aa0.6□□□□□ -2.31
SMC4-220ENST00000488017 CIRBPQ14011 172 aaKnown RBP0.6□□□□□ -2.31
SMC4-220ENST00000488017 ADIRFQ15847 76 aa0.6□□□□□ -2.31
SMC4-220ENST00000488017 PMCHL1Q16048 86 aa0.6□□□□□ -2.31
SMC4-220ENST00000488017 ZNF791Q3KP31 576 aaPredicted RBP0.6□□□□□ -2.31
SMC4-220ENST00000488017 LINC01554Q52M75 96 aa0.6□□□□□ -2.31
SMC4-220ENST00000488017 LYRM7Q5U5X0 104 aa0.6□□□□□ -2.31
SMC4-220ENST00000488017 RPL7L1Q6DKI1 246 aaKnown RBP0.6□□□□□ -2.31
SMC4-220ENST00000488017 SCGB1D4Q6XE38 83 aa0.6□□□□□ -2.31
SMC4-220ENST00000488017 CYP2G1PQ6ZSU1 146 aa0.6□□□□□ -2.31
SMC4-220ENST00000488017 FAM223AQ8IWN6 122 aa0.6□□□□□ -2.31
SMC4-220ENST00000488017 OR5AS1Q8N127 324 aa0.6□□□□□ -2.31
SMC4-220ENST00000488017 SIGLECL1Q8N7X8 197 aa0.6□□□□□ -2.31
SMC4-220ENST00000488017 CCL4L1Q8NHW4 92 aa0.6□□□□□ -2.31
SMC4-220ENST00000488017 ZNF563Q8TA94 476 aa0.6□□□□□ -2.31
SMC4-220ENST00000488017 FAM213BQ8TBF2 198 aa0.6□□□□□ -2.31
SMC4-220ENST00000488017 TSKUQ8WUA8 353 aa0.6□□□□□ -2.31
SMC4-220ENST00000488017 SMIM4Q8WVI0 70 aa0.6□□□□□ -2.31
SMC4-220ENST00000488017 PPP1R1CQ8WVI7 109 aa0.6□□□□□ -2.31
SMC4-220ENST00000488017 DIRC1Q969H9 104 aa0.6□□□□□ -2.31
SMC4-220ENST00000488017 RAB37Q96AX2 223 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms