RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 ATP5G1P05496 136 aa7.8□□□□□ -1.16
CCDC171-208ENST00000486641 A0A1B0GX51 115 aa7.79□□□□□ -1.16
CCDC171-208ENST00000486641 TIMM17BO60830 172 aa7.79□□□□□ -1.16
CCDC171-208ENST00000486641 IGKV3-20P01619 116 aa7.79□□□□□ -1.16
CCDC171-208ENST00000486641 CXCL5P42830 114 aa7.79□□□□□ -1.16
CCDC171-208ENST00000486641 C22orf24Q9Y442 160 aa7.79□□□□□ -1.16
CCDC171-208ENST00000486641 IGHG2P01859 326 aa7.79□□□□□ -1.16
CCDC171-208ENST00000486641 IGF2-ASQ6U949 168 aa7.79□□□□□ -1.16
CCDC171-208ENST00000486641 Q8N2B8 174 aa7.79□□□□□ -1.16
CCDC171-208ENST00000486641 EDA2RQ9HAV5 297 aa7.79□□□□□ -1.16
CCDC171-208ENST00000486641 PEMTQ9UBM1 199 aa7.79□□□□□ -1.16
CCDC171-208ENST00000486641 IGHV3-73A0A0B4J1V6 119 aa7.78□□□□□ -1.16
CCDC171-208ENST00000486641 BAALC-AS2P0C853 105 aa7.78□□□□□ -1.16
CCDC171-208ENST00000486641 PROK1P58294 105 aa7.78□□□□□ -1.16
CCDC171-208ENST00000486641 TIRAPP58753 221 aa7.78□□□□□ -1.16
CCDC171-208ENST00000486641 BEAN1Q3B7T3 259 aa7.78□□□□□ -1.16
CCDC171-208ENST00000486641 GAGE2AQ6NT46 116 aa7.78□□□□□ -1.16
CCDC171-208ENST00000486641 BDP1A6H8Y1 2624 aa7.78□□□□□ -1.16
CCDC171-208ENST00000486641 CRYGAP11844 174 aa7.78□□□□□ -1.16
CCDC171-208ENST00000486641 LINC00308Q8TCZ7 52 aa7.78□□□□□ -1.16
CCDC171-208ENST00000486641 HRNRQ86YZ3 2850 aaPredicted RBP7.77□□□□□ -1.17
CCDC171-208ENST00000486641 A0A0U1RRA0 63 aa7.77□□□□□ -1.17
CCDC171-208ENST00000486641 CYSTM1Q9H1C7 97 aa7.77□□□□□ -1.17
CCDC171-208ENST00000486641 AKAP13Q12802 2813 aa7.77□□□□□ -1.17
CCDC171-208ENST00000486641 IGHV1OR15-1A0A075B7D0 117 aa7.77□□□□□ -1.17
CCDC171-208ENST00000486641 hADV29S1A0JD25 119 aa7.77□□□□□ -1.17
CCDC171-208ENST00000486641 Q9UF83 564 aa7.77□□□□□ -1.17
CCDC171-208ENST00000486641 CDKN2A-AS1Q9UH64 79 aa7.77□□□□□ -1.17
CCDC171-208ENST00000486641 NDUFA1O15239 70 aa7.76□□□□□ -1.17
CCDC171-208ENST00000486641 HIST1H4AP62805 103 aaKnown RBP7.76□□□□□ -1.17
CCDC171-208ENST00000486641 RPS28P62857 69 aaKnown RBP7.76□□□□□ -1.17
CCDC171-208ENST00000486641 C11orf71Q6IPW1 123 aa7.76□□□□□ -1.17
CCDC171-208ENST00000486641 ZNF625Q96I27 306 aaPredicted RBP7.76□□□□□ -1.17
CCDC171-208ENST00000486641 UBE2D4Q9Y2X8 147 aa7.76□□□□□ -1.17
CCDC171-208ENST00000486641 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.75□□□□□ -1.17
CCDC171-208ENST00000486641 IGKV2-29A2NJV5 120 aaPredicted RBP7.75□□□□□ -1.17
CCDC171-208ENST00000486641 CIRBPQ14011 172 aaKnown RBP7.75□□□□□ -1.17
CCDC171-208ENST00000486641 FAM218AQ96MZ4 157 aa7.75□□□□□ -1.17
CCDC171-208ENST00000486641 CHCHD7Q9BUK0 85 aa7.75□□□□□ -1.17
CCDC171-208ENST00000486641 MOB4Q9Y3A3 225 aa7.75□□□□□ -1.17
CCDC171-208ENST00000486641 ANKRD11Q6UB99 2663 aaPredicted RBP7.75□□□□□ -1.17
CCDC171-208ENST00000486641 IGHV3OR16-10A0A075B7F0 116 aa7.75□□□□□ -1.17
CCDC171-208ENST00000486641 TRACP01848 142 aa7.75□□□□□ -1.17
CCDC171-208ENST00000486641 SPINK13Q1W4C9 94 aa7.75□□□□□ -1.17
CCDC171-208ENST00000486641 SOSTDC1Q6X4U4 206 aa7.75□□□□□ -1.17
CCDC171-208ENST00000486641 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.75□□□□□ -1.17
CCDC171-208ENST00000486641 ATOX1O00244 68 aa7.74□□□□□ -1.17
CCDC171-208ENST00000486641 USMG5Q96IX5 58 aa7.74□□□□□ -1.17
CCDC171-208ENST00000486641 Q9H8V8 135 aa7.74□□□□□ -1.17
CCDC171-208ENST00000486641 TRAV13-1A0A0B4J241 112 aa7.73□□□□□ -1.17
CCDC171-208ENST00000486641 PF4V1P10720 104 aa7.73□□□□□ -1.17
CCDC171-208ENST00000486641 COX6A2Q02221 97 aa7.73□□□□□ -1.17
CCDC171-208ENST00000486641 KIR2DL5BQ8NHK3 375 aa7.73□□□□□ -1.17
CCDC171-208ENST00000486641 ACACAQ13085 2346 aa7.73□□□□□ -1.17
CCDC171-208ENST00000486641 ANKHD1Q8IWZ3 2542 aaKnown RBP7.73□□□□□ -1.17
CCDC171-208ENST00000486641 EP300Q09472 2414 aaPredicted RBP7.73□□□□□ -1.17
CCDC171-208ENST00000486641 CELSR1Q9NYQ6 3014 aa7.73□□□□□ -1.17
CCDC171-208ENST00000486641 LINC00467Q9BRT7 94 aa7.73□□□□□ -1.17
CCDC171-208ENST00000486641 Q9HAA7 133 aa7.73□□□□□ -1.17
CCDC171-208ENST00000486641 UBTD1Q9HAC8 227 aa7.73□□□□□ -1.17
CCDC171-208ENST00000486641 NACAE9PAV3 2078 aa7.73□□□□□ -1.17
CCDC171-208ENST00000486641 RS1O15537 224 aa7.72□□□□□ -1.17
CCDC171-208ENST00000486641 CDSNQ15517 529 aa7.72□□□□□ -1.17
CCDC171-208ENST00000486641 Q6ZSN1 163 aa7.72□□□□□ -1.17
CCDC171-208ENST00000486641 OR13C6PQ8NH95 151 aa7.72□□□□□ -1.17
CCDC171-208ENST00000486641 KNCNA6PVL3 124 aa7.72□□□□□ -1.17
CCDC171-208ENST00000486641 INAFM2P0DMQ5 153 aa7.72□□□□□ -1.17
CCDC171-208ENST00000486641 KLRB1Q12918 225 aa7.72□□□□□ -1.17
CCDC171-208ENST00000486641 DPH3Q96FX2 82 aa7.72□□□□□ -1.17
CCDC171-208ENST00000486641 IGLV5-45A0A087WSX0 123 aa7.71□□□□□ -1.18
CCDC171-208ENST00000486641 HTN1P15515 57 aa7.71□□□□□ -1.18
CCDC171-208ENST00000486641 MALP21145 153 aa7.71□□□□□ -1.18
CCDC171-208ENST00000486641 FAM222AQ5U5X8 452 aa7.71□□□□□ -1.18
CCDC171-208ENST00000486641 IGHV3-38A0A0C4DH36 116 aa7.7□□□□□ -1.18
CCDC171-208ENST00000486641 RPL18AQ02543 176 aaKnown RBP7.7□□□□□ -1.18
CCDC171-208ENST00000486641 HOXD3P31249 432 aaPredicted RBP7.7□□□□□ -1.18
CCDC171-208ENST00000486641 LY6EQ16553 131 aa7.7□□□□□ -1.18
CCDC171-208ENST00000486641 SPTBN1Q01082 2364 aaKnown RBP7.7□□□□□ -1.18
CCDC171-208ENST00000486641 IGKV3D-7A0A0C4DH55 119 aa7.69□□□□□ -1.18
CCDC171-208ENST00000486641 IGLV5-39A0A0G2JS06 123 aa7.69□□□□□ -1.18
CCDC171-208ENST00000486641 K7EMT4 169 aa7.69□□□□□ -1.18
CCDC171-208ENST00000486641 WIPF1O43516 503 aa7.69□□□□□ -1.18
CCDC171-208ENST00000486641 PRM2P04554 102 aa7.69□□□□□ -1.18
CCDC171-208ENST00000486641 RBMY1A1P0DJD3 496 aaKnown RBP7.69□□□□□ -1.18
CCDC171-208ENST00000486641 RBMY1CP0DJD4 496 aa7.69□□□□□ -1.18
CCDC171-208ENST00000486641 RBMY1FQ15415 496 aaKnown RBP7.69□□□□□ -1.18
CCDC171-208ENST00000486641 C9orf129Q5T035 196 aaKnown RBP7.69□□□□□ -1.18
CCDC171-208ENST00000486641 PRIMA1Q86XR5 153 aa7.69□□□□□ -1.18
CCDC171-208ENST00000486641 GVINP1Q7Z2Y8 2422 aa7.69□□□□□ -1.18
CCDC171-208ENST00000486641 H3BUA1 57 aa7.69□□□□□ -1.18
CCDC171-208ENST00000486641 OXTP01178 125 aa7.69□□□□□ -1.18
CCDC171-208ENST00000486641 FBXL19-AS1Q494R0 122 aa7.69□□□□□ -1.18
CCDC171-208ENST00000486641 BRD3OSQ6XYD6 125 aa7.69□□□□□ -1.18
CCDC171-208ENST00000486641 UPK3BQ9BT76 320 aa7.69□□□□□ -1.18
CCDC171-208ENST00000486641 LMO4P61968 165 aa7.68□□□□□ -1.18
CCDC171-208ENST00000486641 BLCAPP62952 87 aa7.68□□□□□ -1.18
CCDC171-208ENST00000486641 PIK3CD-AS1Q5SR53 167 aa7.68□□□□□ -1.18
CCDC171-208ENST00000486641 IGHV3OR16-12A0A075B7B8 117 aa7.68□□□□□ -1.18
CCDC171-208ENST00000486641 A0A087WVE0 104 aa7.68□□□□□ -1.18
CCDC171-208ENST00000486641 CCL21O00585 134 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms