RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 RBX1P62877 108 aa8.79□□□□□ -1
SMARCD3-211ENST00000485592 GAGE6Q13070 117 aa8.79□□□□□ -1
SMARCD3-211ENST00000485592 SPANXN1Q5VSR9 72 aa8.79□□□□□ -1
SMARCD3-211ENST00000485592 FAM231DQ6ZW35 169 aa8.79□□□□□ -1
SMARCD3-211ENST00000485592 FER1L6-AS1Q8NA97 138 aa8.79□□□□□ -1
SMARCD3-211ENST00000485592 GTSF1Q8WW33 167 aa8.79□□□□□ -1
SMARCD3-211ENST00000485592 BIN3Q9NQY0 253 aa8.79□□□□□ -1
SMARCD3-211ENST00000485592 KIF25-AS1Q9Y6Z4 181 aa8.79□□□□□ -1
SMARCD3-211ENST00000485592 ZNF727A8MUV8 499 aa8.78□□□□□ -1
SMARCD3-211ENST00000485592 SMIM17P0DL12 118 aa8.78□□□□□ -1
SMARCD3-211ENST00000485592 CNBPP62633 177 aaKnown RBP8.78□□□□□ -1
SMARCD3-211ENST00000485592 NTM-AS1Q6ZSK4 140 aa8.78□□□□□ -1
SMARCD3-211ENST00000485592 DPH3Q96FX2 82 aa8.78□□□□□ -1
SMARCD3-211ENST00000485592 CNFNQ9BYD5 112 aa8.78□□□□□ -1
SMARCD3-211ENST00000485592 IGHV3-64A0A075B6Q5 118 aa8.77□□□□□ -1.01
SMARCD3-211ENST00000485592 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.77□□□□□ -1.01
SMARCD3-211ENST00000485592 hDV102S1A0JD36 115 aa8.77□□□□□ -1.01
SMARCD3-211ENST00000485592 REG3AQ06141 175 aa8.77□□□□□ -1.01
SMARCD3-211ENST00000485592 CIRBPQ14011 172 aaKnown RBP8.77□□□□□ -1.01
SMARCD3-211ENST00000485592 KRTAP26-1Q6PEX3 210 aa8.77□□□□□ -1.01
SMARCD3-211ENST00000485592 RNF185Q96GF1 192 aa8.77□□□□□ -1.01
SMARCD3-211ENST00000485592 DPH3P1Q9H4G8 78 aa8.77□□□□□ -1.01
SMARCD3-211ENST00000485592 AP5S1Q9NUS5 200 aa8.77□□□□□ -1.01
SMARCD3-211ENST00000485592 IGLV10-54A0A075B6I4 117 aa8.76□□□□□ -1.01
SMARCD3-211ENST00000485592 IGHV1-24A0A0C4DH33 117 aa8.76□□□□□ -1.01
SMARCD3-211ENST00000485592 SSTP61278 116 aa8.76□□□□□ -1.01
SMARCD3-211ENST00000485592 CLLU1Q5K131 121 aa8.76□□□□□ -1.01
SMARCD3-211ENST00000485592 LYZL1Q6UWQ5 148 aa8.76□□□□□ -1.01
SMARCD3-211ENST00000485592 TPPP3Q9BW30 176 aa8.76□□□□□ -1.01
SMARCD3-211ENST00000485592 SMDT1Q9H4I9 107 aa8.76□□□□□ -1.01
SMARCD3-211ENST00000485592 TRAV8-4A0A0B4J246 113 aa8.75□□□□□ -1.01
SMARCD3-211ENST00000485592 XKRY2A2RUG3 117 aa8.75□□□□□ -1.01
SMARCD3-211ENST00000485592 RPL23P62829 140 aaKnown RBP8.75□□□□□ -1.01
SMARCD3-211ENST00000485592 PEA15Q15121 130 aa8.75□□□□□ -1.01
SMARCD3-211ENST00000485592 IQCJQ1A5X6 159 aa8.75□□□□□ -1.01
SMARCD3-211ENST00000485592 CT83Q5H943 113 aa8.75□□□□□ -1.01
SMARCD3-211ENST00000485592 ISOC2Q96AB3 205 aa8.75□□□□□ -1.01
SMARCD3-211ENST00000485592 AP1S3Q96PC3 154 aa8.75□□□□□ -1.01
SMARCD3-211ENST00000485592 A0A087WYN8 130 aa8.74□□□□□ -1.01
SMARCD3-211ENST00000485592 F2Z2F3 143 aa8.74□□□□□ -1.01
SMARCD3-211ENST00000485592 CACNG7P62955 275 aa8.74□□□□□ -1.01
SMARCD3-211ENST00000485592 FAM74A3Q4VXF1 159 aa8.74□□□□□ -1.01
SMARCD3-211ENST00000485592 C7orf33Q8WU49 177 aa8.74□□□□□ -1.01
SMARCD3-211ENST00000485592 OSTCQ9NRP0 149 aa8.74□□□□□ -1.01
SMARCD3-211ENST00000485592 V9GYV3 84 aa8.74□□□□□ -1.01
SMARCD3-211ENST00000485592 H7C1H1 209 aa8.73□□□□□ -1.01
SMARCD3-211ENST00000485592 GATCO43716 136 aaKnown RBP8.73□□□□□ -1.01
SMARCD3-211ENST00000485592 TMEM241Q24JQ0 296 aa8.73□□□□□ -1.01
SMARCD3-211ENST00000485592 SPACA4Q8TDM5 124 aa8.73□□□□□ -1.01
SMARCD3-211ENST00000485592 NAT8Q9UHE5 227 aa8.73□□□□□ -1.01
SMARCD3-211ENST00000485592 MGPP08493 103 aa8.72□□□□□ -1.01
SMARCD3-211ENST00000485592 CHTF8P0CG12 524 aa8.72□□□□□ -1.01
SMARCD3-211ENST00000485592 NTF3P20783 257 aa8.72□□□□□ -1.01
SMARCD3-211ENST00000485592 FOXA3P55318 350 aaPredicted RBP8.72□□□□□ -1.01
SMARCD3-211ENST00000485592 WDR73Q6P4I2 378 aa8.72□□□□□ -1.01
SMARCD3-211ENST00000485592 C20orf203Q8NBC4 194 aa8.72□□□□□ -1.01
SMARCD3-211ENST00000485592 A8MWL6 223 aa8.71□□□□□ -1.02
SMARCD3-211ENST00000485592 PHOX2AO14813 284 aa8.71□□□□□ -1.02
SMARCD3-211ENST00000485592 RAB14P61106 215 aa8.71□□□□□ -1.02
SMARCD3-211ENST00000485592 ADIRFQ15847 76 aa8.71□□□□□ -1.02
SMARCD3-211ENST00000485592 TSKUQ8WUA8 353 aa8.71□□□□□ -1.02
SMARCD3-211ENST00000485592 TMEM243Q9BU79 118 aa8.71□□□□□ -1.02
SMARCD3-211ENST00000485592 A0A1B0GUV1 79 aa8.7□□□□□ -1.02
SMARCD3-211ENST00000485592 HIGD1CA8MV81 97 aa8.7□□□□□ -1.02
SMARCD3-211ENST00000485592 M0QY20 66 aa8.7□□□□□ -1.02
SMARCD3-211ENST00000485592 PGLYRP4Q96LB8 373 aa8.7□□□□□ -1.02
SMARCD3-211ENST00000485592 GFRA4Q9GZZ7 299 aa8.7□□□□□ -1.02
SMARCD3-211ENST00000485592 PLAC8Q9NZF1 115 aa8.7□□□□□ -1.02
SMARCD3-211ENST00000485592 IGLV4-60A0A075B6I1 120 aa8.69□□□□□ -1.02
SMARCD3-211ENST00000485592 UBE2L6O14933 153 aa8.69□□□□□ -1.02
SMARCD3-211ENST00000485592 SLPIP03973 132 aa8.69□□□□□ -1.02
SMARCD3-211ENST00000485592 SUMO4Q6EEV6 95 aa8.69□□□□□ -1.02
SMARCD3-211ENST00000485592 FAM231BA6NCW3 169 aa8.68□□□□□ -1.02
SMARCD3-211ENST00000485592 TRGC1P0CF51 173 aa8.68□□□□□ -1.02
SMARCD3-211ENST00000485592 ADCYAP1P18509 176 aa8.68□□□□□ -1.02
SMARCD3-211ENST00000485592 TWIST1Q15672 202 aa8.68□□□□□ -1.02
SMARCD3-211ENST00000485592 CFAP161Q6P656 301 aa8.68□□□□□ -1.02
SMARCD3-211ENST00000485592 SMIM27A0A1W2PRY6 76 aa8.67□□□□□ -1.02
SMARCD3-211ENST00000485592 NUP35Q8NFH5 326 aa8.67□□□□□ -1.02
SMARCD3-211ENST00000485592 LINC01600Q96MT4 127 aa8.67□□□□□ -1.02
SMARCD3-211ENST00000485592 RPS10P46783 165 aaKnown RBP8.66□□□□□ -1.02
SMARCD3-211ENST00000485592 COX6A2Q02221 97 aa8.66□□□□□ -1.02
SMARCD3-211ENST00000485592 MAJINQ3KP22 176 aa8.66□□□□□ -1.02
SMARCD3-211ENST00000485592 RASL11AQ6T310 242 aa8.66□□□□□ -1.02
SMARCD3-211ENST00000485592 TRAV26-2A0A0B4J265 109 aa8.65□□□□□ -1.02
SMARCD3-211ENST00000485592 IGKV2-24A0A0C4DH68 120 aa8.65□□□□□ -1.02
SMARCD3-211ENST00000485592 A0A1B0GUT8 65 aa8.65□□□□□ -1.02
SMARCD3-211ENST00000485592 GAGE12HA6NDE8 117 aa8.65□□□□□ -1.02
SMARCD3-211ENST00000485592 AMTP48728 403 aa8.65□□□□□ -1.02
SMARCD3-211ENST00000485592 PRR3P79522 188 aaKnown RBP8.65□□□□□ -1.02
SMARCD3-211ENST00000485592 COTL1Q14019 142 aa8.65□□□□□ -1.02
SMARCD3-211ENST00000485592 C15orf56Q8N910 161 aa8.65□□□□□ -1.02
SMARCD3-211ENST00000485592 GATD1Q8NB37 220 aa8.65□□□□□ -1.02
SMARCD3-211ENST00000485592 IGKV3OR2-268A0A0C4DH90 116 aa8.64□□□□□ -1.03
SMARCD3-211ENST00000485592 GAS8-AS1O95177 125 aa8.64□□□□□ -1.03
SMARCD3-211ENST00000485592 HIGD2BQ4VC39 106 aa8.64□□□□□ -1.03
SMARCD3-211ENST00000485592 UQCC3Q6UW78 93 aa8.64□□□□□ -1.03
SMARCD3-211ENST00000485592 STPG4Q8N801 248 aa8.64□□□□□ -1.03
SMARCD3-211ENST00000485592 NIT2Q9NQR4 276 aa8.64□□□□□ -1.03
SMARCD3-211ENST00000485592 TNXBP22105 4242 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms