RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 ATRAIDQ6UW56 229 aa8.51□□□□□ -1.05
HDAC6-227ENST00000485102 LYZL1Q6UWQ5 148 aa8.51□□□□□ -1.05
HDAC6-227ENST00000485102 ATP5L2Q7Z4Y8 100 aa8.51□□□□□ -1.05
HDAC6-227ENST00000485102 NIT1Q86X76 327 aa8.51□□□□□ -1.05
HDAC6-227ENST00000485102 CIRBP-AS1Q8TBR5 109 aa8.51□□□□□ -1.05
HDAC6-227ENST00000485102 CHCHD7Q9BUK0 85 aa8.51□□□□□ -1.05
HDAC6-227ENST00000485102 SMIM27A0A1W2PRY6 76 aa8.5□□□□□ -1.05
HDAC6-227ENST00000485102 RAB4BP61018 213 aa8.5□□□□□ -1.05
HDAC6-227ENST00000485102 TWIST1Q15672 202 aa8.5□□□□□ -1.05
HDAC6-227ENST00000485102 LINC01620Q4KN68 170 aa8.5□□□□□ -1.05
HDAC6-227ENST00000485102 Q9UF83 564 aa8.5□□□□□ -1.05
HDAC6-227ENST00000485102 TRBV10-1A0A0K0K1A3 114 aa8.49□□□□□ -1.05
HDAC6-227ENST00000485102 PPP1R17O96001 155 aa8.49□□□□□ -1.05
HDAC6-227ENST00000485102 NTF3P20783 257 aa8.49□□□□□ -1.05
HDAC6-227ENST00000485102 OR10AG1Q8NH19 301 aa8.49□□□□□ -1.05
HDAC6-227ENST00000485102 DPH3P1Q9H4G8 78 aa8.49□□□□□ -1.05
HDAC6-227ENST00000485102 URGCP-MRPS24S4R325 110 aa8.49□□□□□ -1.05
HDAC6-227ENST00000485102 GZMBP10144 247 aa8.48□□□□□ -1.05
HDAC6-227ENST00000485102 ELOBQ15370 118 aa8.48□□□□□ -1.05
HDAC6-227ENST00000485102 COX19Q49B96 90 aa8.48□□□□□ -1.05
HDAC6-227ENST00000485102 RASL11AQ6T310 242 aa8.48□□□□□ -1.05
HDAC6-227ENST00000485102 C14orf178Q8N769 122 aaPredicted RBP8.48□□□□□ -1.05
HDAC6-227ENST00000485102 PGLYRP4Q96LB8 373 aa8.48□□□□□ -1.05
HDAC6-227ENST00000485102 SAMD10Q9BYL1 202 aa8.48□□□□□ -1.05
HDAC6-227ENST00000485102 PKHD1L1Q86WI1 4243 aa8.47□□□□□ -1.05
HDAC6-227ENST00000485102 IGKV2D-24A0A075B6R9 120 aa8.47□□□□□ -1.05
HDAC6-227ENST00000485102 APOC3P02656 99 aa8.47□□□□□ -1.05
HDAC6-227ENST00000485102 ADCYAP1P18509 176 aa8.47□□□□□ -1.05
HDAC6-227ENST00000485102 Q0VG73 95 aa8.47□□□□□ -1.05
HDAC6-227ENST00000485102 C14orf177Q52M58 125 aa8.47□□□□□ -1.05
HDAC6-227ENST00000485102 FAM74A4Q5TZK3 123 aa8.47□□□□□ -1.05
HDAC6-227ENST00000485102 CLRN3Q8NCR9 226 aa8.47□□□□□ -1.05
HDAC6-227ENST00000485102 NUP35Q8NFH5 326 aa8.47□□□□□ -1.05
HDAC6-227ENST00000485102 GTSF1Q8WW33 167 aa8.47□□□□□ -1.05
HDAC6-227ENST00000485102 KLK12Q9UKR0 248 aa8.47□□□□□ -1.05
HDAC6-227ENST00000485102 PLA2G2DQ9UNK4 145 aa8.47□□□□□ -1.05
HDAC6-227ENST00000485102 F5H697 171 aa8.46□□□□□ -1.06
HDAC6-227ENST00000485102 HBBP68871 147 aa8.46□□□□□ -1.06
HDAC6-227ENST00000485102 ZNF56Q15929 161 aa8.46□□□□□ -1.06
HDAC6-227ENST00000485102 DNAJC30Q96LL9 226 aa8.46□□□□□ -1.06
HDAC6-227ENST00000485102 TMEM191AQ9H0A3 160 aa8.46□□□□□ -1.06
HDAC6-227ENST00000485102 JPT2Q9H910 190 aa8.46□□□□□ -1.06
HDAC6-227ENST00000485102 A0A087WX48 190 aa8.45□□□□□ -1.06
HDAC6-227ENST00000485102 C7orf77A4D0Y5 90 aa8.45□□□□□ -1.06
HDAC6-227ENST00000485102 RPL36AP83881 106 aaKnown RBP8.45□□□□□ -1.06
HDAC6-227ENST00000485102 TMEM97Q5BJF2 176 aa8.45□□□□□ -1.06
HDAC6-227ENST00000485102 RPL36ALQ969Q0 106 aaKnown RBP8.45□□□□□ -1.06
HDAC6-227ENST00000485102 UBE2WQ96B02 151 aa8.45□□□□□ -1.06
HDAC6-227ENST00000485102 RPS10P5Q9NQ39 176 aa8.45□□□□□ -1.06
HDAC6-227ENST00000485102 A0A087WWL8 130 aa8.43□□□□□ -1.06
HDAC6-227ENST00000485102 MRAP2Q96G30 205 aa8.43□□□□□ -1.06
HDAC6-227ENST00000485102 TRBV7-3A0A075B6L6 115 aa8.42□□□□□ -1.06
HDAC6-227ENST00000485102 PPBPP02775 128 aa8.42□□□□□ -1.06
HDAC6-227ENST00000485102 MGPP08493 103 aa8.42□□□□□ -1.06
HDAC6-227ENST00000485102 UBE2D3P61077 147 aa8.42□□□□□ -1.06
HDAC6-227ENST00000485102 SSTP61278 116 aa8.42□□□□□ -1.06
HDAC6-227ENST00000485102 UBE2D2P62837 147 aa8.42□□□□□ -1.06
HDAC6-227ENST00000485102 DGAT2L7PQ6IED9 249 aa8.42□□□□□ -1.06
HDAC6-227ENST00000485102 MUC21A0A0G2JKD1 596 aa8.41□□□□□ -1.06
HDAC6-227ENST00000485102 MUC21A0A140T8X8 626 aa8.41□□□□□ -1.06
HDAC6-227ENST00000485102 RPL37AP61513 92 aaKnown RBP8.41□□□□□ -1.06
HDAC6-227ENST00000485102 PKIAP61925 76 aa8.41□□□□□ -1.06
HDAC6-227ENST00000485102 ENHOQ6UWT2 76 aa8.41□□□□□ -1.06
HDAC6-227ENST00000485102 C1orf43Q9BWL3 253 aa8.41□□□□□ -1.06
HDAC6-227ENST00000485102 KIF25-AS1Q9Y6Z4 181 aa8.41□□□□□ -1.06
HDAC6-227ENST00000485102 TRBV6-8A0A0A6YYG3 113 aa8.4□□□□□ -1.06
HDAC6-227ENST00000485102 TCAPO15273 167 aa8.4□□□□□ -1.06
HDAC6-227ENST00000485102 MT-ND6P03923 174 aa8.4□□□□□ -1.06
HDAC6-227ENST00000485102 SLC7A5P1Q8MH63 180 aa8.4□□□□□ -1.06
HDAC6-227ENST00000485102 C9orf163Q8N9P6 203 aa8.4□□□□□ -1.06
HDAC6-227ENST00000485102 GATD1Q8NB37 220 aa8.4□□□□□ -1.06
HDAC6-227ENST00000485102 NIT2Q9NQR4 276 aa8.4□□□□□ -1.06
HDAC6-227ENST00000485102 LAMTOR2Q9Y2Q5 125 aa8.4□□□□□ -1.06
HDAC6-227ENST00000485102 A0A1B0GXF2 115 aa8.39□□□□□ -1.07
HDAC6-227ENST00000485102 HLA-DQA1P01909 254 aa8.39□□□□□ -1.07
HDAC6-227ENST00000485102 S100A1P23297 94 aa8.39□□□□□ -1.07
HDAC6-227ENST00000485102 CAMPP49913 170 aa8.39□□□□□ -1.07
HDAC6-227ENST00000485102 HNRNPA3P51991 378 aaKnown RBP8.39□□□□□ -1.07
HDAC6-227ENST00000485102 SMCO4Q9NRQ5 59 aa8.39□□□□□ -1.07
HDAC6-227ENST00000485102 M0QY20 66 aa8.38□□□□□ -1.07
HDAC6-227ENST00000485102 PHOX2AO14813 284 aa8.38□□□□□ -1.07
HDAC6-227ENST00000485102 MT1HL1P0DM35 61 aa8.38□□□□□ -1.07
HDAC6-227ENST00000485102 MIAQ16674 131 aa8.38□□□□□ -1.07
HDAC6-227ENST00000485102 FAM104BQ5XKR9 115 aa8.38□□□□□ -1.07
HDAC6-227ENST00000485102 MRPL54Q6P161 138 aaKnown RBP8.38□□□□□ -1.07
HDAC6-227ENST00000485102 USP17L23D6RBM5 183 aa8.37□□□□□ -1.07
HDAC6-227ENST00000485102 TMEM262E9PQX1 116 aa8.37□□□□□ -1.07
HDAC6-227ENST00000485102 CRPP02741 224 aa8.37□□□□□ -1.07
HDAC6-227ENST00000485102 RAB4AP20338 218 aa8.37□□□□□ -1.07
HDAC6-227ENST00000485102 SUMO4Q6EEV6 95 aa8.37□□□□□ -1.07
HDAC6-227ENST00000485102 Q6ZRU5 148 aa8.37□□□□□ -1.07
HDAC6-227ENST00000485102 GNB1LQ9BYB4 327 aa8.37□□□□□ -1.07
HDAC6-227ENST00000485102 PRR34Q9NV39 138 aa8.37□□□□□ -1.07
HDAC6-227ENST00000485102 TRBV24-1A0A075B6N3 115 aa8.36□□□□□ -1.07
HDAC6-227ENST00000485102 TRBV6-5A0A0K0K1A5 114 aa8.36□□□□□ -1.07
HDAC6-227ENST00000485102 NCR2O95944 276 aa8.36□□□□□ -1.07
HDAC6-227ENST00000485102 PRSS1P07477 247 aa8.36□□□□□ -1.07
HDAC6-227ENST00000485102 CKS2P33552 79 aa8.36□□□□□ -1.07
HDAC6-227ENST00000485102 SMAGPQ0VAQ4 97 aa8.36□□□□□ -1.07
HDAC6-227ENST00000485102 MPV17L2Q567V2 206 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms