RNA–Protein interactions for RNA: ENST00000484867.1

RC3H1-205, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-205ENST00000484867 MRPL36Q9P0J6 103 aaKnown RBP1.44□□□□□ -2.18
RC3H1-205ENST00000484867 PRO1854Q9UHT4 67 aa1.44□□□□□ -2.18
RC3H1-205ENST00000484867 CROCC2H7BZ55 1655 aa1.44□□□□□ -2.18
RC3H1-205ENST00000484867 PPLO60437 1756 aa1.44□□□□□ -2.18
RC3H1-205ENST00000484867 KDM3BQ7LBC6 1761 aa1.44□□□□□ -2.18
RC3H1-205ENST00000484867 FREM1Q5H8C1 2179 aa1.44□□□□□ -2.18
RC3H1-205ENST00000484867 PLXNA4Q9HCM2 1894 aa1.43□□□□□ -2.18
RC3H1-205ENST00000484867 SPTBP11277 2137 aa1.43□□□□□ -2.18
RC3H1-205ENST00000484867 CDC42BPAQ5VT25 1732 aa1.43□□□□□ -2.18
RC3H1-205ENST00000484867 BRWD1Q9NSI6 2320 aa1.43□□□□□ -2.18
RC3H1-205ENST00000484867 TRBV10-1A0A0K0K1A3 114 aa1.43□□□□□ -2.18
RC3H1-205ENST00000484867 F2Z2F3 143 aa1.43□□□□□ -2.18
RC3H1-205ENST00000484867 CHKB-CPT1BH3BT56 60 aa1.43□□□□□ -2.18
RC3H1-205ENST00000484867 SFTA3P0C7M3 94 aa1.43□□□□□ -2.18
RC3H1-205ENST00000484867 UBE2D1P51668 147 aa1.43□□□□□ -2.18
RC3H1-205ENST00000484867 KLKP1Q107X0 134 aa1.43□□□□□ -2.18
RC3H1-205ENST00000484867 ELOBQ15370 118 aa1.43□□□□□ -2.18
RC3H1-205ENST00000484867 PMCHL1Q16048 86 aa1.43□□□□□ -2.18
RC3H1-205ENST00000484867 CFAP126Q5VTH2 177 aa1.43□□□□□ -2.18
RC3H1-205ENST00000484867 SFTA2Q6UW10 78 aa1.43□□□□□ -2.18
RC3H1-205ENST00000484867 ZNF818PQ6ZRF7 136 aa1.43□□□□□ -2.18
RC3H1-205ENST00000484867 VMO1Q7Z5L0 202 aa1.43□□□□□ -2.18
RC3H1-205ENST00000484867 STRCQ7RTU9 1775 aa1.43□□□□□ -2.18
RC3H1-205ENST00000484867 LRP5O75197 1615 aa1.43□□□□□ -2.18
RC3H1-205ENST00000484867 ANK1P16157 1881 aa1.43□□□□□ -2.18
RC3H1-205ENST00000484867 ATP10BO94823 1461 aa1.43□□□□□ -2.18
RC3H1-205ENST00000484867 DIP2AQ14689 1571 aa1.42□□□□□ -2.18
RC3H1-205ENST00000484867 MED13Q9UHV7 2174 aa1.42□□□□□ -2.18
RC3H1-205ENST00000484867 USP54Q70EL1 1684 aa1.42□□□□□ -2.18
RC3H1-205ENST00000484867 TRPM7Q96QT4 1865 aa1.42□□□□□ -2.18
RC3H1-205ENST00000484867 IQGAP3Q86VI3 1631 aa1.42□□□□□ -2.18
RC3H1-205ENST00000484867 IGKV3-7A0A075B6H7 116 aa1.42□□□□□ -2.18
RC3H1-205ENST00000484867 TRBV6-8A0A0A6YYG3 113 aa1.42□□□□□ -2.18
RC3H1-205ENST00000484867 A0A0J9YY99 117 aa1.42□□□□□ -2.18
RC3H1-205ENST00000484867 CLPSL1A2RUU4 121 aa1.42□□□□□ -2.18
RC3H1-205ENST00000484867 NUPR2A6NF83 97 aa1.42□□□□□ -2.18
RC3H1-205ENST00000484867 TMEM14DPA8MWL7 114 aa1.42□□□□□ -2.18
RC3H1-205ENST00000484867 HCRTO43612 131 aa1.42□□□□□ -2.18
RC3H1-205ENST00000484867 ACYP1P07311 99 aa1.42□□□□□ -2.18
RC3H1-205ENST00000484867 SMIM13P0DJ93 91 aa1.42□□□□□ -2.18
RC3H1-205ENST00000484867 LINC00643Q86TS7 51 aa1.42□□□□□ -2.18
RC3H1-205ENST00000484867 DEFB107AQ8IZN7 70 aa1.42□□□□□ -2.18
RC3H1-205ENST00000484867 PATE1Q8WXA2 126 aa1.42□□□□□ -2.18
RC3H1-205ENST00000484867 LIMD2Q9BT23 127 aa1.42□□□□□ -2.18
RC3H1-205ENST00000484867 V9GYH0 126 aa1.42□□□□□ -2.18
RC3H1-205ENST00000484867 ESPL1Q14674 2120 aa1.42□□□□□ -2.18
RC3H1-205ENST00000484867 ITSN2Q9NZM3 1697 aa1.42□□□□□ -2.18
RC3H1-205ENST00000484867 SIPA1L3O60292 1781 aaPredicted RBP1.42□□□□□ -2.18
RC3H1-205ENST00000484867 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.41□□□□□ -2.18
RC3H1-205ENST00000484867 MROH1Q8NDA8 1641 aa1.41□□□□□ -2.18
RC3H1-205ENST00000484867 COL24A1Q17RW2 1714 aa1.41□□□□□ -2.18
RC3H1-205ENST00000484867 SBF2Q86WG5 1849 aa1.41□□□□□ -2.18
RC3H1-205ENST00000484867 PATJQ8NI35 1801 aa1.41□□□□□ -2.18
RC3H1-205ENST00000484867 SCN3AQ9NY46 2000 aa1.41□□□□□ -2.18
RC3H1-205ENST00000484867 TRAV23DV6A0A075B6W5 121 aa1.41□□□□□ -2.18
RC3H1-205ENST00000484867 FXYD6-FXYD2A0A087WZ82 144 aa1.41□□□□□ -2.18
RC3H1-205ENST00000484867 J3QRE1 110 aa1.41□□□□□ -2.18
RC3H1-205ENST00000484867 EDDM3BP56851 147 aa1.41□□□□□ -2.18
RC3H1-205ENST00000484867 SMIM11AP58511 58 aa1.41□□□□□ -2.18
RC3H1-205ENST00000484867 KRTAP6-3Q3LI67 103 aa1.41□□□□□ -2.18
RC3H1-205ENST00000484867 DMAC1Q96GE9 116 aa1.41□□□□□ -2.18
RC3H1-205ENST00000484867 FXYD6Q9H0Q3 95 aa1.41□□□□□ -2.18
RC3H1-205ENST00000484867 HEATR1Q9H583 2144 aaKnown RBP1.41□□□□□ -2.18
RC3H1-205ENST00000484867 CDC42SE2Q9NRR3 84 aa1.41□□□□□ -2.18
RC3H1-205ENST00000484867 ORMDL1Q9P0S3 153 aa1.41□□□□□ -2.18
RC3H1-205ENST00000484867 IQSEC2Q5JU85 1478 aa1.41□□□□□ -2.18
RC3H1-205ENST00000484867 DIP2BQ9P265 1576 aa1.41□□□□□ -2.18
RC3H1-205ENST00000484867 LAMC3Q9Y6N6 1575 aa1.41□□□□□ -2.18
RC3H1-205ENST00000484867 PDCD11Q14690 1871 aaKnown RBP1.41□□□□□ -2.18
RC3H1-205ENST00000484867 PCDH15Q96QU1 1955 aa1.41□□□□□ -2.18
RC3H1-205ENST00000484867 CASP8AP2Q9UKL3 1982 aa1.41□□□□□ -2.18
RC3H1-205ENST00000484867 DUOX2Q9NRD8 1548 aa1.4□□□□□ -2.18
RC3H1-205ENST00000484867 ARHGEF12Q9NZN5 1544 aa1.4□□□□□ -2.18
RC3H1-205ENST00000484867 PREX2Q70Z35 1606 aa1.4□□□□□ -2.18
RC3H1-205ENST00000484867 MYO5CQ9NQX4 1742 aa1.4□□□□□ -2.18
RC3H1-205ENST00000484867 ANKRD36A6QL64 1941 aa1.4□□□□□ -2.18
RC3H1-205ENST00000484867 PTPRDP23468 1912 aa1.4□□□□□ -2.18
RC3H1-205ENST00000484867 MUC6Q6W4X9 2439 aa1.4□□□□□ -2.18
RC3H1-205ENST00000484867 DOCK10Q96BY6 2186 aa1.4□□□□□ -2.19
RC3H1-205ENST00000484867 DOCK11Q5JSL3 2073 aa1.4□□□□□ -2.19
RC3H1-205ENST00000484867 SCN11AQ9UI33 1791 aa1.4□□□□□ -2.19
RC3H1-205ENST00000484867 PXDNQ92626 1479 aa1.4□□□□□ -2.19
RC3H1-205ENST00000484867 TRBV25-1A0A075B6N4 114 aa1.4□□□□□ -2.19
RC3H1-205ENST00000484867 A0A087WWC5 75 aa1.4□□□□□ -2.19
RC3H1-205ENST00000484867 IGHV3-30P01768 117 aa1.4□□□□□ -2.19
RC3H1-205ENST00000484867 IGHV3-30-5P0DP03 117 aa1.4□□□□□ -2.19
RC3H1-205ENST00000484867 ZNF56Q15929 161 aa1.4□□□□□ -2.19
RC3H1-205ENST00000484867 TMEM170BQ5T4T1 132 aa1.4□□□□□ -2.19
RC3H1-205ENST00000484867 C4orf3Q8WVX3 66 aa1.4□□□□□ -2.19
RC3H1-205ENST00000484867 TMEM14BQ9NUH8 114 aa1.4□□□□□ -2.19
RC3H1-205ENST00000484867 TSC2P49815 1807 aa1.4□□□□□ -2.19
RC3H1-205ENST00000484867 AFDNP55196 1824 aaKnown RBP1.4□□□□□ -2.19
RC3H1-205ENST00000484867 LAMC1P11047 1609 aa1.4□□□□□ -2.19
RC3H1-205ENST00000484867 ABCA9Q8IUA7 1624 aa1.4□□□□□ -2.19
RC3H1-205ENST00000484867 ABCC6O95255 1503 aa1.4□□□□□ -2.19
RC3H1-205ENST00000484867 BLMP54132 1417 aaPredicted RBP1.4□□□□□ -2.19
RC3H1-205ENST00000484867 RGPD3A6NKT7 1758 aaPredicted RBP1.39□□□□□ -2.19
RC3H1-205ENST00000484867 RGPD4Q7Z3J3 1758 aa1.39□□□□□ -2.19
RC3H1-205ENST00000484867 PPRC1Q5VV67 1664 aaKnown RBP1.39□□□□□ -2.19
RC3H1-205ENST00000484867 GOLGA4Q13439 2230 aaKnown RBP1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms