RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 GATCO43716 136 aaKnown RBP9.92□□□□□ -0.82
HLA-DQB1-208ENST00000484729 GZMBP10144 247 aa9.92□□□□□ -0.82
HLA-DQB1-208ENST00000484729 MIAQ16674 131 aa9.92□□□□□ -0.82
HLA-DQB1-208ENST00000484729 TMEM97Q5BJF2 176 aa9.92□□□□□ -0.82
HLA-DQB1-208ENST00000484729 NTM-AS1Q6ZSK4 140 aa9.92□□□□□ -0.82
HLA-DQB1-208ENST00000484729 COMMD7Q86VX2 200 aa9.92□□□□□ -0.82
HLA-DQB1-208ENST00000484729 PKHD1L1Q86WI1 4243 aa9.92□□□□□ -0.82
HLA-DQB1-208ENST00000484729 MGPP08493 103 aa9.91□□□□□ -0.82
HLA-DQB1-208ENST00000484729 GAGE6Q13070 117 aa9.91□□□□□ -0.82
HLA-DQB1-208ENST00000484729 FER1L6-AS1Q8NA97 138 aa9.91□□□□□ -0.82
HLA-DQB1-208ENST00000484729 LRP2P98164 4655 aa9.91□□□□□ -0.82
HLA-DQB1-208ENST00000484729 TRBV25-1A0A075B6N4 114 aa9.9□□□□□ -0.82
HLA-DQB1-208ENST00000484729 RPL23P62829 140 aaKnown RBP9.9□□□□□ -0.82
HLA-DQB1-208ENST00000484729 RBX1P62877 108 aa9.9□□□□□ -0.82
HLA-DQB1-208ENST00000484729 UQCC3Q6UW78 93 aa9.9□□□□□ -0.82
HLA-DQB1-208ENST00000484729 FAM231DQ6ZW35 169 aa9.9□□□□□ -0.82
HLA-DQB1-208ENST00000484729 KIF25-AS1Q9Y6Z4 181 aa9.9□□□□□ -0.82
HLA-DQB1-208ENST00000484729 LINC00269Q8N2A0 174 aa9.89□□□□□ -0.83
HLA-DQB1-208ENST00000484729 ISOC2Q96AB3 205 aa9.89□□□□□ -0.83
HLA-DQB1-208ENST00000484729 PRSS1P07477 247 aa9.88□□□□□ -0.83
HLA-DQB1-208ENST00000484729 IGLC6P0CF74 106 aa9.88□□□□□ -0.83
HLA-DQB1-208ENST00000484729 OSTCQ9NRP0 149 aa9.88□□□□□ -0.83
HLA-DQB1-208ENST00000484729 PRR34Q9NV39 138 aa9.88□□□□□ -0.83
HLA-DQB1-208ENST00000484729 IGHV1-24A0A0C4DH33 117 aa9.87□□□□□ -0.83
HLA-DQB1-208ENST00000484729 LINC00862A6NCI5 91 aa9.87□□□□□ -0.83
HLA-DQB1-208ENST00000484729 A8MWL6 223 aa9.87□□□□□ -0.83
HLA-DQB1-208ENST00000484729 H7C1H1 209 aa9.87□□□□□ -0.83
HLA-DQB1-208ENST00000484729 IQCJQ1A5X6 159 aa9.87□□□□□ -0.83
HLA-DQB1-208ENST00000484729 CT83Q5H943 113 aa9.87□□□□□ -0.83
HLA-DQB1-208ENST00000484729 SUMO4Q6EEV6 95 aa9.87□□□□□ -0.83
HLA-DQB1-208ENST00000484729 M0QY20 66 aa9.86□□□□□ -0.83
HLA-DQB1-208ENST00000484729 CACNG7P62955 275 aa9.86□□□□□ -0.83
HLA-DQB1-208ENST00000484729 LYZL1Q6UWQ5 148 aa9.86□□□□□ -0.83
HLA-DQB1-208ENST00000484729 IGLV10-54A0A075B6I4 117 aa9.85□□□□□ -0.83
HLA-DQB1-208ENST00000484729 F2Z2F3 143 aa9.85□□□□□ -0.83
HLA-DQB1-208ENST00000484729 F8W036 122 aa9.85□□□□□ -0.83
HLA-DQB1-208ENST00000484729 CTRLP40313 264 aa9.85□□□□□ -0.83
HLA-DQB1-208ENST00000484729 REG3AQ06141 175 aa9.85□□□□□ -0.83
HLA-DQB1-208ENST00000484729 DGAT2L7PQ6IED9 249 aa9.85□□□□□ -0.83
HLA-DQB1-208ENST00000484729 KRTAP26-1Q6PEX3 210 aa9.85□□□□□ -0.83
HLA-DQB1-208ENST00000484729 C9orf163Q8N9P6 203 aa9.85□□□□□ -0.83
HLA-DQB1-208ENST00000484729 PNRC1Q12796 327 aaPredicted RBP9.84□□□□□ -0.83
HLA-DQB1-208ENST00000484729 BORCS7Q96B45 105 aa9.84□□□□□ -0.83
HLA-DQB1-208ENST00000484729 TMEM243Q9BU79 118 aa9.84□□□□□ -0.83
HLA-DQB1-208ENST00000484729 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.84□□□□□ -0.83
HLA-DQB1-208ENST00000484729 V9GYV3 84 aa9.84□□□□□ -0.83
HLA-DQB1-208ENST00000484729 TMEM218A2RU14 115 aa9.83□□□□□ -0.84
HLA-DQB1-208ENST00000484729 RASL11AQ6T310 242 aa9.83□□□□□ -0.84
HLA-DQB1-208ENST00000484729 TSKUQ8WUA8 353 aa9.83□□□□□ -0.84
HLA-DQB1-208ENST00000484729 GTSF1Q8WW33 167 aa9.83□□□□□ -0.84
HLA-DQB1-208ENST00000484729 PGLYRP4Q96LB8 373 aa9.83□□□□□ -0.84
HLA-DQB1-208ENST00000484729 TRGC1P0CF51 173 aa9.82□□□□□ -0.84
HLA-DQB1-208ENST00000484729 ADCYAP1P18509 176 aa9.82□□□□□ -0.84
HLA-DQB1-208ENST00000484729 C20orf203Q8NBC4 194 aa9.82□□□□□ -0.84
HLA-DQB1-208ENST00000484729 CLRN3Q8NCR9 226 aa9.82□□□□□ -0.84
HLA-DQB1-208ENST00000484729 GFRA4Q9GZZ7 299 aa9.82□□□□□ -0.84
HLA-DQB1-208ENST00000484729 IGLV4-60A0A075B6I1 120 aa9.81□□□□□ -0.84
HLA-DQB1-208ENST00000484729 hDV102S1A0JD36 115 aa9.81□□□□□ -0.84
HLA-DQB1-208ENST00000484729 HIGD1CA8MV81 97 aa9.81□□□□□ -0.84
HLA-DQB1-208ENST00000484729 PANO1I0J062 215 aa9.81□□□□□ -0.84
HLA-DQB1-208ENST00000484729 TWIST1Q15672 202 aa9.81□□□□□ -0.84
HLA-DQB1-208ENST00000484729 DPH3P1Q9H4G8 78 aa9.81□□□□□ -0.84
HLA-DQB1-208ENST00000484729 TRAV8-4A0A0B4J246 113 aa9.8□□□□□ -0.84
HLA-DQB1-208ENST00000484729 FAM231BA6NCW3 169 aa9.8□□□□□ -0.84
HLA-DQB1-208ENST00000484729 UBE2L6O14933 153 aa9.8□□□□□ -0.84
HLA-DQB1-208ENST00000484729 PPP1R2P9O14990 202 aa9.8□□□□□ -0.84
HLA-DQB1-208ENST00000484729 NTF3P20783 257 aa9.8□□□□□ -0.84
HLA-DQB1-208ENST00000484729 WDR73Q6P4I2 378 aa9.8□□□□□ -0.84
HLA-DQB1-208ENST00000484729 Q6ZRU5 148 aa9.8□□□□□ -0.84
HLA-DQB1-208ENST00000484729 SEC11CQ9BY50 192 aa9.8□□□□□ -0.84
HLA-DQB1-208ENST00000484729 MT-ND4LP03901 98 aa9.79□□□□□ -0.84
HLA-DQB1-208ENST00000484729 AMTP48728 403 aa9.79□□□□□ -0.84
HLA-DQB1-208ENST00000484729 COTL1Q14019 142 aa9.79□□□□□ -0.84
HLA-DQB1-208ENST00000484729 ODF1Q14990 250 aa9.79□□□□□ -0.84
HLA-DQB1-208ENST00000484729 SDIM1Q6ZPB5 146 aa9.79□□□□□ -0.84
HLA-DQB1-208ENST00000484729 SMIM15Q7Z3B0 74 aa9.79□□□□□ -0.84
HLA-DQB1-208ENST00000484729 CNFNQ9BYD5 112 aa9.79□□□□□ -0.84
HLA-DQB1-208ENST00000484729 NIT2Q9NQR4 276 aa9.79□□□□□ -0.84
HLA-DQB1-208ENST00000484729 AP5S1Q9NUS5 200 aa9.79□□□□□ -0.84
HLA-DQB1-208ENST00000484729 NAT8BQ9UHF3 227 aa9.79□□□□□ -0.84
HLA-DQB1-208ENST00000484729 A0A1B0GUT8 65 aa9.78□□□□□ -0.84
HLA-DQB1-208ENST00000484729 A0A1B0GUV1 79 aa9.78□□□□□ -0.84
HLA-DQB1-208ENST00000484729 CNBPP62633 177 aaKnown RBP9.78□□□□□ -0.84
HLA-DQB1-208ENST00000484729 SMIM27A0A1W2PRY6 76 aa9.77□□□□□ -0.85
HLA-DQB1-208ENST00000484729 FOXA3P55318 350 aaPredicted RBP9.77□□□□□ -0.85
HLA-DQB1-208ENST00000484729 NUP35Q8NFH5 326 aa9.77□□□□□ -0.85
HLA-DQB1-208ENST00000484729 ANAPC16Q96DE5 110 aa9.77□□□□□ -0.85
HLA-DQB1-208ENST00000484729 IGHV3-64A0A075B6Q5 118 aa9.76□□□□□ -0.85
HLA-DQB1-208ENST00000484729 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.76□□□□□ -0.85
HLA-DQB1-208ENST00000484729 RIGQ13278 110 aa9.76□□□□□ -0.85
HLA-DQB1-208ENST00000484729 DPH3Q96FX2 82 aa9.76□□□□□ -0.85
HLA-DQB1-208ENST00000484729 TNXBP22105 4242 aa9.75□□□□□ -0.85
HLA-DQB1-208ENST00000484729 IGKV3OR2-268A0A0C4DH90 116 aa9.75□□□□□ -0.85
HLA-DQB1-208ENST00000484729 NDUFA5Q16718 116 aa9.75□□□□□ -0.85
HLA-DQB1-208ENST00000484729 CARHSP1Q9Y2V2 147 aaKnown RBP9.75□□□□□ -0.85
HLA-DQB1-208ENST00000484729 TRAV26-2A0A0B4J265 109 aa9.74□□□□□ -0.85
HLA-DQB1-208ENST00000484729 CHTF8P0CG12 524 aa9.74□□□□□ -0.85
HLA-DQB1-208ENST00000484729 GAGE12HA6NDE8 117 aa9.73□□□□□ -0.85
HLA-DQB1-208ENST00000484729 SLPIP03973 132 aa9.73□□□□□ -0.85
HLA-DQB1-208ENST00000484729 CIRBPQ14011 172 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms