RNA–Protein interactions for RNA: ENST00000483690.1

MCF2-207, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

TSL 3

Gene MCF2, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-207ENST00000483690 LIMD2Q9BT23 127 aa1.59□□□□□ -2.15
MCF2-207ENST00000483690 SPANXDQ9BXN6 97 aa1.59□□□□□ -2.15
MCF2-207ENST00000483690 Q9H521 79 aa1.59□□□□□ -2.15
MCF2-207ENST00000483690 PRUNE2Q8WUY3 3088 aa1.59□□□□□ -2.16
MCF2-207ENST00000483690 SIPA1L3O60292 1781 aaPredicted RBP1.59□□□□□ -2.16
MCF2-207ENST00000483690 RBBP6Q7Z6E9 1792 aaKnown RBP1.59□□□□□ -2.16
MCF2-207ENST00000483690 PTPRZ1P23471 2315 aaPredicted RBP1.58□□□□□ -2.16
MCF2-207ENST00000483690 EPG5Q9HCE0 2579 aa1.58□□□□□ -2.16
MCF2-207ENST00000483690 SCN7AQ01118 1682 aa1.58□□□□□ -2.16
MCF2-207ENST00000483690 BCORQ6W2J9 1755 aa1.58□□□□□ -2.16
MCF2-207ENST00000483690 DLEC1Q9Y238 1755 aa1.58□□□□□ -2.16
MCF2-207ENST00000483690 TRBV7-6A0A0J9YX20 115 aa1.58□□□□□ -2.16
MCF2-207ENST00000483690 A0A0J9YY99 117 aa1.58□□□□□ -2.16
MCF2-207ENST00000483690 LOC100130705A0A1B0GUX0 176 aa1.58□□□□□ -2.16
MCF2-207ENST00000483690 NPFFO15130 113 aa1.58□□□□□ -2.16
MCF2-207ENST00000483690 MPC2O95563 127 aa1.58□□□□□ -2.16
MCF2-207ENST00000483690 AKAIN1P0CW23 69 aa1.58□□□□□ -2.16
MCF2-207ENST00000483690 LINC00694P0DN24 101 aa1.58□□□□□ -2.16
MCF2-207ENST00000483690 BTG2P78543 158 aa1.58□□□□□ -2.16
MCF2-207ENST00000483690 HSD52Q0P140 79 aa1.58□□□□□ -2.16
MCF2-207ENST00000483690 OR4S1Q8NGB4 309 aa1.58□□□□□ -2.16
MCF2-207ENST00000483690 OR51A4Q8NGJ6 313 aa1.58□□□□□ -2.16
MCF2-207ENST00000483690 TMEM191AQ9H0A3 160 aa1.58□□□□□ -2.16
MCF2-207ENST00000483690 RERGLQ9H628 205 aa1.58□□□□□ -2.16
MCF2-207ENST00000483690 FBN2P35556 2912 aa1.58□□□□□ -2.16
MCF2-207ENST00000483690 COL4A6Q14031 1691 aa1.58□□□□□ -2.16
MCF2-207ENST00000483690 ZNF831Q5JPB2 1677 aa1.58□□□□□ -2.16
MCF2-207ENST00000483690 EYSQ5T1H1 3165 aa1.57□□□□□ -2.16
MCF2-207ENST00000483690 SPAARA0A1B0GVQ0 90 aa1.57□□□□□ -2.16
MCF2-207ENST00000483690 ZNF670-ZNF695F2Z2N8 137 aa1.57□□□□□ -2.16
MCF2-207ENST00000483690 IGLC6P0CF74 106 aa1.57□□□□□ -2.16
MCF2-207ENST00000483690 GUCA1AP43080 201 aaPredicted RBP1.57□□□□□ -2.16
MCF2-207ENST00000483690 FXYD4P59646 89 aa1.57□□□□□ -2.16
MCF2-207ENST00000483690 DCDP81605 110 aaKnown RBP1.57□□□□□ -2.16
MCF2-207ENST00000483690 MMGT1Q8N4V1 131 aa1.57□□□□□ -2.16
MCF2-207ENST00000483690 C5orf17Q8NAS9 161 aa1.57□□□□□ -2.16
MCF2-207ENST00000483690 MAGOHBQ96A72 148 aaKnown RBP1.57□□□□□ -2.16
MCF2-207ENST00000483690 AP1S3Q96PC3 154 aa1.57□□□□□ -2.16
MCF2-207ENST00000483690 RPRMQ9NS64 109 aa1.57□□□□□ -2.16
MCF2-207ENST00000483690 TAS2R8Q9NYW2 309 aa1.57□□□□□ -2.16
MCF2-207ENST00000483690 IER3IP1Q9Y5U9 82 aa1.57□□□□□ -2.16
MCF2-207ENST00000483690 MYH9P35579 1960 aaKnown RBP1.57□□□□□ -2.16
MCF2-207ENST00000483690 FASNP49327 2511 aaKnown RBP1.57□□□□□ -2.16
MCF2-207ENST00000483690 TRANK1O15050 2925 aa1.56□□□□□ -2.16
MCF2-207ENST00000483690 FLNBO75369 2602 aaKnown RBP1.56□□□□□ -2.16
MCF2-207ENST00000483690 SETXQ7Z333 2677 aaKnown RBP1.56□□□□□ -2.16
MCF2-207ENST00000483690 DUOX1Q9NRD9 1551 aa1.56□□□□□ -2.16
MCF2-207ENST00000483690 A0A0G2JMM0 328 aa1.56□□□□□ -2.16
MCF2-207ENST00000483690 LOC107984640A0A0U1RRK4 108 aa1.56□□□□□ -2.16
MCF2-207ENST00000483690 A0A1W2PPB8 328 aa1.56□□□□□ -2.16
MCF2-207ENST00000483690 BBIP1A8MTZ0 92 aa1.56□□□□□ -2.16
MCF2-207ENST00000483690 KIR3DP1A8MWS1 328 aa1.56□□□□□ -2.16
MCF2-207ENST00000483690 SNAPC5O75971 98 aa1.56□□□□□ -2.16
MCF2-207ENST00000483690 TNFP01375 233 aa1.56□□□□□ -2.16
MCF2-207ENST00000483690 IL7P13232 177 aa1.56□□□□□ -2.16
MCF2-207ENST00000483690 CRYGSP22914 178 aa1.56□□□□□ -2.16
MCF2-207ENST00000483690 TPPP2P59282 170 aa1.56□□□□□ -2.16
MCF2-207ENST00000483690 S100A10P60903 97 aa1.56□□□□□ -2.16
MCF2-207ENST00000483690 PLGLB1Q02325 96 aa1.56□□□□□ -2.16
MCF2-207ENST00000483690 MORN4Q8NDC4 146 aa1.56□□□□□ -2.16
MCF2-207ENST00000483690 CIB3Q96Q77 187 aaPredicted RBP1.56□□□□□ -2.16
MCF2-207ENST00000483690 SDF2Q99470 211 aa1.56□□□□□ -2.16
MCF2-207ENST00000483690 SNRNP25Q9BV90 132 aaKnown RBP1.56□□□□□ -2.16
MCF2-207ENST00000483690 CCDC167Q9P0B6 97 aa1.56□□□□□ -2.16
MCF2-207ENST00000483690 MPC1Q9Y5U8 109 aa1.56□□□□□ -2.16
MCF2-207ENST00000483690 NOTCH1P46531 2555 aa1.56□□□□□ -2.16
MCF2-207ENST00000483690 KDM3BQ7LBC6 1761 aa1.56□□□□□ -2.16
MCF2-207ENST00000483690 ARFGEF2Q9Y6D5 1785 aa1.56□□□□□ -2.16
MCF2-207ENST00000483690 ANKRD11Q6UB99 2663 aaPredicted RBP1.56□□□□□ -2.16
MCF2-207ENST00000483690 NCOR2Q9Y618 2525 aa1.56□□□□□ -2.16
MCF2-207ENST00000483690 MUC3AQ02505 3323 aa1.55□□□□□ -2.16
MCF2-207ENST00000483690 CDH23Q9H251 3354 aa1.55□□□□□ -2.16
MCF2-207ENST00000483690 DDX60Q8IY21 1712 aaKnown RBP1.55□□□□□ -2.16
MCF2-207ENST00000483690 TPRP12270 2363 aaKnown RBP1.55□□□□□ -2.16
MCF2-207ENST00000483690 MT-ND4LP03901 98 aa1.55□□□□□ -2.16
MCF2-207ENST00000483690 MEIG1Q5JSS6 88 aa1.55□□□□□ -2.16
MCF2-207ENST00000483690 TMEM244Q5VVB8 128 aa1.55□□□□□ -2.16
MCF2-207ENST00000483690 TTC9CQ8N5M4 171 aa1.55□□□□□ -2.16
MCF2-207ENST00000483690 S100ZQ8WXG8 99 aa1.55□□□□□ -2.16
MCF2-207ENST00000483690 PRO1933Q9H354 126 aa1.55□□□□□ -2.16
MCF2-207ENST00000483690 SAR1AQ9NR31 198 aa1.55□□□□□ -2.16
MCF2-207ENST00000483690 CBLN4Q9NTU7 201 aa1.55□□□□□ -2.16
MCF2-207ENST00000483690 FKBP11Q9NYL4 201 aa1.55□□□□□ -2.16
MCF2-207ENST00000483690 CHD6Q8TD26 2715 aa1.55□□□□□ -2.16
MCF2-207ENST00000483690 ZFHX4Q86UP3 3567 aa1.55□□□□□ -2.16
MCF2-207ENST00000483690 ACACBO00763 2458 aa1.55□□□□□ -2.16
MCF2-207ENST00000483690 PARP14Q460N5 1801 aa1.54□□□□□ -2.16
MCF2-207ENST00000483690 WDR87Q6ZQQ6 2873 aa1.54□□□□□ -2.16
MCF2-207ENST00000483690 MYH6P13533 1939 aa1.54□□□□□ -2.16
MCF2-207ENST00000483690 MYH13Q9UKX3 1938 aa1.54□□□□□ -2.16
MCF2-207ENST00000483690 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.54□□□□□ -2.16
MCF2-207ENST00000483690 LOC107986453A0A1B0GWG9 222 aa1.54□□□□□ -2.16
MCF2-207ENST00000483690 A0A1W2PRS3 328 aa1.54□□□□□ -2.16
MCF2-207ENST00000483690 CCDC179H3BU77 68 aa1.54□□□□□ -2.16
MCF2-207ENST00000483690 PDE6GP18545 87 aa1.54□□□□□ -2.16
MCF2-207ENST00000483690 RPL22P35268 128 aaKnown RBP1.54□□□□□ -2.16
MCF2-207ENST00000483690 FOXA3P55318 350 aaPredicted RBP1.54□□□□□ -2.16
MCF2-207ENST00000483690 UBA52P62987 128 aaKnown RBP1.54□□□□□ -2.16
MCF2-207ENST00000483690 Q5BKY6 102 aa1.54□□□□□ -2.16
MCF2-207ENST00000483690 SVBPQ8N300 66 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms