RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 IGHV1-58A0A0C4DH39 117 aa8.71□□□□□ -1.02
VTI1A-205ENST00000483122 GNLYP22749 145 aa8.71□□□□□ -1.02
VTI1A-205ENST00000483122 FAM19A5Q7Z5A7 132 aaPredicted RBP8.71□□□□□ -1.02
VTI1A-205ENST00000483122 SMIM9A6NGZ8 99 aa8.7□□□□□ -1.02
VTI1A-205ENST00000483122 KLLNB2CW77 178 aa8.7□□□□□ -1.02
VTI1A-205ENST00000483122 CCL21O00585 134 aa8.7□□□□□ -1.02
VTI1A-205ENST00000483122 ACYP1P07311 99 aa8.7□□□□□ -1.02
VTI1A-205ENST00000483122 ZFYVE26Q68DK2 2539 aa8.7□□□□□ -1.02
VTI1A-205ENST00000483122 CD28P10747 220 aa8.7□□□□□ -1.02
VTI1A-205ENST00000483122 LINC00643Q86TS7 51 aa8.7□□□□□ -1.02
VTI1A-205ENST00000483122 CITED2Q99967 270 aaPredicted RBP8.7□□□□□ -1.02
VTI1A-205ENST00000483122 FAM208BQ5VWN6 2430 aa8.69□□□□□ -1.02
VTI1A-205ENST00000483122 TRAV41A0A0B4J266 112 aa8.69□□□□□ -1.02
VTI1A-205ENST00000483122 ZFP36P26651 326 aaKnown RBP8.69□□□□□ -1.02
VTI1A-205ENST00000483122 MRPS36P82909 103 aaKnown RBP8.69□□□□□ -1.02
VTI1A-205ENST00000483122 J3KT08 172 aa8.68□□□□□ -1.02
VTI1A-205ENST00000483122 LRRC75A-AS1Q8N1F1 130 aa8.68□□□□□ -1.02
VTI1A-205ENST00000483122 VSIG2Q96IQ7 327 aa8.68□□□□□ -1.02
VTI1A-205ENST00000483122 IGHV3-16A0A0C4DH30 117 aa8.68□□□□□ -1.02
VTI1A-205ENST00000483122 COX7CP15954 63 aa8.68□□□□□ -1.02
VTI1A-205ENST00000483122 C2orf48Q96LS8 159 aa8.68□□□□□ -1.02
VTI1A-205ENST00000483122 C9orf85Q96MD7 179 aa8.68□□□□□ -1.02
VTI1A-205ENST00000483122 CFAP46Q8IYW2 2715 aa8.67□□□□□ -1.02
VTI1A-205ENST00000483122 DAZ2Q13117 558 aaKnown RBP8.67□□□□□ -1.02
VTI1A-205ENST00000483122 DAZ4Q86SG3 579 aaKnown RBP8.67□□□□□ -1.02
VTI1A-205ENST00000483122 EDA2RQ9HAV5 297 aa8.67□□□□□ -1.02
VTI1A-205ENST00000483122 DAZ1Q9NQZ3 744 aaKnown RBP8.67□□□□□ -1.02
VTI1A-205ENST00000483122 DAZ3Q9NR90 486 aaKnown RBP8.67□□□□□ -1.02
VTI1A-205ENST00000483122 C5orf38Q86SI9 138 aa8.66□□□□□ -1.02
VTI1A-205ENST00000483122 EDN2P20800 178 aa8.66□□□□□ -1.02
VTI1A-205ENST00000483122 ADORA2A-AS1P86434 159 aa8.66□□□□□ -1.02
VTI1A-205ENST00000483122 SDIM1Q6ZPB5 146 aa8.66□□□□□ -1.02
VTI1A-205ENST00000483122 TMEM219Q86XT9 240 aa8.66□□□□□ -1.02
VTI1A-205ENST00000483122 SIRPDQ9H106 197 aa8.66□□□□□ -1.02
VTI1A-205ENST00000483122 CYSTM1Q9H1C7 97 aa8.66□□□□□ -1.02
VTI1A-205ENST00000483122 CHD6Q8TD26 2715 aa8.65□□□□□ -1.02
VTI1A-205ENST00000483122 TRAV12-2A0A075B6T6 113 aa8.65□□□□□ -1.02
VTI1A-205ENST00000483122 A0A1B0GX51 115 aa8.65□□□□□ -1.02
VTI1A-205ENST00000483122 NDUFA4O00483 81 aa8.65□□□□□ -1.02
VTI1A-205ENST00000483122 IGHV3-11P01762 117 aa8.65□□□□□ -1.02
VTI1A-205ENST00000483122 GRNP28799 593 aaKnown RBP8.65□□□□□ -1.02
VTI1A-205ENST00000483122 GAGE2AQ6NT46 116 aa8.65□□□□□ -1.02
VTI1A-205ENST00000483122 C22orf24Q9Y442 160 aa8.65□□□□□ -1.02
VTI1A-205ENST00000483122 hADV29S1A0JD25 119 aa8.65□□□□□ -1.02
VTI1A-205ENST00000483122 COX7A2LO14548 114 aa8.65□□□□□ -1.02
VTI1A-205ENST00000483122 SAA4P35542 130 aa8.65□□□□□ -1.02
VTI1A-205ENST00000483122 C5orf56Q8N8D9 126 aa8.65□□□□□ -1.02
VTI1A-205ENST00000483122 RHPN1-AS1Q9BWJ2 59 aa8.65□□□□□ -1.02
VTI1A-205ENST00000483122 IGKV3-20P01619 116 aa8.64□□□□□ -1.03
VTI1A-205ENST00000483122 ATP5G1P05496 136 aa8.64□□□□□ -1.03
VTI1A-205ENST00000483122 PYGO1Q9Y3Y4 419 aa8.64□□□□□ -1.03
VTI1A-205ENST00000483122 FAM223BA6NKX1 122 aa8.64□□□□□ -1.03
VTI1A-205ENST00000483122 PLA2G2AP14555 144 aa8.64□□□□□ -1.03
VTI1A-205ENST00000483122 FAM223AQ8IWN6 122 aa8.64□□□□□ -1.03
VTI1A-205ENST00000483122 Q8N2B8 174 aa8.64□□□□□ -1.03
VTI1A-205ENST00000483122 IGHV3-73A0A0B4J1V6 119 aa8.63□□□□□ -1.03
VTI1A-205ENST00000483122 A0A0U1RRA0 63 aa8.63□□□□□ -1.03
VTI1A-205ENST00000483122 IGHG2P01859 326 aa8.63□□□□□ -1.03
VTI1A-205ENST00000483122 CRYGAP11844 174 aa8.63□□□□□ -1.03
VTI1A-205ENST00000483122 CXCL5P42830 114 aa8.63□□□□□ -1.03
VTI1A-205ENST00000483122 TIRAPP58753 221 aa8.63□□□□□ -1.03
VTI1A-205ENST00000483122 PEMTQ9UBM1 199 aa8.63□□□□□ -1.03
VTI1A-205ENST00000483122 TINCRA0A1B0GVN0 87 aa8.63□□□□□ -1.03
VTI1A-205ENST00000483122 J3QKU1 62 aa8.63□□□□□ -1.03
VTI1A-205ENST00000483122 TIMM17BO60830 172 aa8.63□□□□□ -1.03
VTI1A-205ENST00000483122 BAALC-AS2P0C853 105 aa8.63□□□□□ -1.03
VTI1A-205ENST00000483122 PROK1P58294 105 aa8.63□□□□□ -1.03
VTI1A-205ENST00000483122 BEAN1Q3B7T3 259 aa8.63□□□□□ -1.03
VTI1A-205ENST00000483122 C19orf54Q5BKX5 351 aa8.63□□□□□ -1.03
VTI1A-205ENST00000483122 LINC00308Q8TCZ7 52 aa8.62□□□□□ -1.03
VTI1A-205ENST00000483122 ZNF462Q96JM2 2506 aa8.62□□□□□ -1.03
VTI1A-205ENST00000483122 FBXL19-AS1Q494R0 122 aa8.62□□□□□ -1.03
VTI1A-205ENST00000483122 KIR2DL5BQ8NHK3 375 aa8.62□□□□□ -1.03
VTI1A-205ENST00000483122 UBTD1Q9HAC8 227 aa8.62□□□□□ -1.03
VTI1A-205ENST00000483122 RS1O15537 224 aa8.61□□□□□ -1.03
VTI1A-205ENST00000483122 HIST1H4AP62805 103 aaKnown RBP8.61□□□□□ -1.03
VTI1A-205ENST00000483122 ZNF625Q96I27 306 aaPredicted RBP8.61□□□□□ -1.03
VTI1A-205ENST00000483122 FAM218AQ96MZ4 157 aa8.61□□□□□ -1.03
VTI1A-205ENST00000483122 Q9UF83 564 aa8.61□□□□□ -1.03
VTI1A-205ENST00000483122 SOSTDC1Q6X4U4 206 aa8.61□□□□□ -1.03
VTI1A-205ENST00000483122 CDKN2A-AS1Q9UH64 79 aa8.61□□□□□ -1.03
VTI1A-205ENST00000483122 NBASA2RRP1 2371 aa8.61□□□□□ -1.03
VTI1A-205ENST00000483122 NACAE9PAV3 2078 aa8.6□□□□□ -1.03
VTI1A-205ENST00000483122 HIVEP3Q5T1R4 2406 aa8.6□□□□□ -1.03
VTI1A-205ENST00000483122 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.6□□□□□ -1.03
VTI1A-205ENST00000483122 IGHV3OR16-10A0A075B7F0 116 aa8.6□□□□□ -1.03
VTI1A-205ENST00000483122 TRAV13-1A0A0B4J241 112 aa8.6□□□□□ -1.03
VTI1A-205ENST00000483122 IGKV2-29A2NJV5 120 aaPredicted RBP8.6□□□□□ -1.03
VTI1A-205ENST00000483122 ASH1LQ9NR48 2969 aaKnown RBP8.6□□□□□ -1.03
VTI1A-205ENST00000483122 IGHV1OR15-1A0A075B7D0 117 aa8.6□□□□□ -1.03
VTI1A-205ENST00000483122 NDUFA1O15239 70 aa8.6□□□□□ -1.03
VTI1A-205ENST00000483122 RPS28P62857 69 aaKnown RBP8.6□□□□□ -1.03
VTI1A-205ENST00000483122 ATOX1O00244 68 aa8.59□□□□□ -1.03
VTI1A-205ENST00000483122 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.59□□□□□ -1.03
VTI1A-205ENST00000483122 OR13C6PQ8NH95 151 aa8.59□□□□□ -1.03
VTI1A-205ENST00000483122 UBE2D4Q9Y2X8 147 aa8.59□□□□□ -1.03
VTI1A-205ENST00000483122 TRACP01848 142 aa8.59□□□□□ -1.03
VTI1A-205ENST00000483122 CDSNQ15517 529 aa8.59□□□□□ -1.03
VTI1A-205ENST00000483122 SPINK13Q1W4C9 94 aa8.59□□□□□ -1.03
VTI1A-205ENST00000483122 CHCHD7Q9BUK0 85 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms