RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 MAP3K1Q13233 1512 aa1.21□□□□□ -2.22
LAPTM4A-202ENST00000483117 CEP192Q8TEP8 1941 aa1.21□□□□□ -2.22
LAPTM4A-202ENST00000483117 SHANK2Q9UPX8 1470 aa1.21□□□□□ -2.22
LAPTM4A-202ENST00000483117 NBDYA0A0U1RRE5 68 aa1.21□□□□□ -2.22
LAPTM4A-202ENST00000483117 H3BQF6 201 aa1.21□□□□□ -2.22
LAPTM4A-202ENST00000483117 SYS1-DBNDD2H3BUS1 97 aa1.21□□□□□ -2.22
LAPTM4A-202ENST00000483117 CAV3P56539 151 aa1.21□□□□□ -2.22
LAPTM4A-202ENST00000483117 EDDM3BP56851 147 aa1.21□□□□□ -2.22
LAPTM4A-202ENST00000483117 SMIM11AP58511 58 aa1.21□□□□□ -2.22
LAPTM4A-202ENST00000483117 FXYD4P59646 89 aa1.21□□□□□ -2.22
LAPTM4A-202ENST00000483117 KRTAP13-4Q3LI77 160 aa1.21□□□□□ -2.22
LAPTM4A-202ENST00000483117 C10orf99Q6UWK7 81 aa1.21□□□□□ -2.22
LAPTM4A-202ENST00000483117 Q6ZQY7 126 aa1.21□□□□□ -2.22
LAPTM4A-202ENST00000483117 VMO1Q7Z5L0 202 aa1.21□□□□□ -2.22
LAPTM4A-202ENST00000483117 FAM213BQ8TBF2 198 aa1.21□□□□□ -2.22
LAPTM4A-202ENST00000483117 S100A16Q96FQ6 103 aaKnown RBP1.21□□□□□ -2.22
LAPTM4A-202ENST00000483117 AHNAK2Q8IVF2 5795 aa1.21□□□□□ -2.22
LAPTM4A-202ENST00000483117 FBN3Q75N90 2809 aa1.21□□□□□ -2.22
LAPTM4A-202ENST00000483117 PATJQ8NI35 1801 aa1.21□□□□□ -2.22
LAPTM4A-202ENST00000483117 PCNX2A6NKB5 2137 aa1.21□□□□□ -2.22
LAPTM4A-202ENST00000483117 PTPRDP23468 1912 aa1.21□□□□□ -2.22
LAPTM4A-202ENST00000483117 NRXN2Q9P2S2 1712 aa1.2□□□□□ -2.22
LAPTM4A-202ENST00000483117 DOCK1Q14185 1865 aa1.2□□□□□ -2.22
LAPTM4A-202ENST00000483117 RTTNQ86VV8 2226 aa1.2□□□□□ -2.22
LAPTM4A-202ENST00000483117 TET3O43151 1660 aa1.2□□□□□ -2.22
LAPTM4A-202ENST00000483117 TRAV22A0A0B4J277 110 aa1.2□□□□□ -2.22
LAPTM4A-202ENST00000483117 IGKV2-29A2NJV5 120 aaPredicted RBP1.2□□□□□ -2.22
LAPTM4A-202ENST00000483117 CLPSL1A2RUU4 121 aa1.2□□□□□ -2.22
LAPTM4A-202ENST00000483117 CHKB-CPT1BH3BT56 60 aa1.2□□□□□ -2.22
LAPTM4A-202ENST00000483117 UQCRHP07919 91 aa1.2□□□□□ -2.22
LAPTM4A-202ENST00000483117 TRAPPC2P0DI81 140 aa1.2□□□□□ -2.22
LAPTM4A-202ENST00000483117 TRAPPC2BP0DI82 140 aa1.2□□□□□ -2.22
LAPTM4A-202ENST00000483117 TMEM170BQ5T4T1 132 aa1.2□□□□□ -2.22
LAPTM4A-202ENST00000483117 Q5VV11 94 aa1.2□□□□□ -2.22
LAPTM4A-202ENST00000483117 Q8N6K4 173 aa1.2□□□□□ -2.22
LAPTM4A-202ENST00000483117 C5orf56Q8N8D9 126 aa1.2□□□□□ -2.22
LAPTM4A-202ENST00000483117 CDC42SE2Q9NRR3 84 aa1.2□□□□□ -2.22
LAPTM4A-202ENST00000483117 NDUFA4L2Q9NRX3 87 aa1.2□□□□□ -2.22
LAPTM4A-202ENST00000483117 ALPK2Q86TB3 2170 aa1.2□□□□□ -2.22
LAPTM4A-202ENST00000483117 ABCC2Q92887 1545 aa1.2□□□□□ -2.22
LAPTM4A-202ENST00000483117 RREB1Q92766 1687 aa1.2□□□□□ -2.22
LAPTM4A-202ENST00000483117 SBF2Q86WG5 1849 aa1.19□□□□□ -2.22
LAPTM4A-202ENST00000483117 MUC6Q6W4X9 2439 aa1.19□□□□□ -2.22
LAPTM4A-202ENST00000483117 TMEM14DPA8MWL7 114 aa1.19□□□□□ -2.22
LAPTM4A-202ENST00000483117 H7BZZ5 65 aa1.19□□□□□ -2.22
LAPTM4A-202ENST00000483117 PPP1R17O96001 155 aa1.19□□□□□ -2.22
LAPTM4A-202ENST00000483117 APOC3P02656 99 aa1.19□□□□□ -2.22
LAPTM4A-202ENST00000483117 SAA2P0DJI9 122 aaPredicted RBP1.19□□□□□ -2.22
LAPTM4A-202ENST00000483117 CR1P17927 2039 aa1.19□□□□□ -2.22
LAPTM4A-202ENST00000483117 SPAG11BQ08648 103 aa1.19□□□□□ -2.22
LAPTM4A-202ENST00000483117 PMCHL1Q16048 86 aa1.19□□□□□ -2.22
LAPTM4A-202ENST00000483117 SPAG11AQ6PDA7 123 aa1.19□□□□□ -2.22
LAPTM4A-202ENST00000483117 LINC00575Q6W349 94 aa1.19□□□□□ -2.22
LAPTM4A-202ENST00000483117 DEFB119Q8N690 84 aa1.19□□□□□ -2.22
LAPTM4A-202ENST00000483117 C20orf78Q9BR46 151 aa1.19□□□□□ -2.22
LAPTM4A-202ENST00000483117 NXT2Q9NPJ8 142 aaKnown RBP1.19□□□□□ -2.22
LAPTM4A-202ENST00000483117 BAZ2BQ9UIF8 2168 aaKnown RBP1.19□□□□□ -2.22
LAPTM4A-202ENST00000483117 MYOM1P52179 1685 aa1.19□□□□□ -2.22
LAPTM4A-202ENST00000483117 KDM5DQ9BY66 1539 aa1.19□□□□□ -2.22
LAPTM4A-202ENST00000483117 NINQ8N4C6 2090 aa1.19□□□□□ -2.22
LAPTM4A-202ENST00000483117 MYH8P13535 1937 aa1.19□□□□□ -2.22
LAPTM4A-202ENST00000483117 MAP3K4Q9Y6R4 1608 aa1.18□□□□□ -2.22
LAPTM4A-202ENST00000483117 ERVK-7P63135 1459 aa1.18□□□□□ -2.22
LAPTM4A-202ENST00000483117 HEATR1Q9H583 2144 aaKnown RBP1.18□□□□□ -2.22
LAPTM4A-202ENST00000483117 FN1P02751 2386 aaKnown RBP1.18□□□□□ -2.22
LAPTM4A-202ENST00000483117 TRBV25-1A0A075B6N4 114 aa1.18□□□□□ -2.22
LAPTM4A-202ENST00000483117 KANTRA0A1W2PQU2 76 aa1.18□□□□□ -2.22
LAPTM4A-202ENST00000483117 FXYD1O00168 92 aa1.18□□□□□ -2.22
LAPTM4A-202ENST00000483117 HMGN4O00479 90 aa1.18□□□□□ -2.22
LAPTM4A-202ENST00000483117 CCL18P55774 89 aa1.18□□□□□ -2.22
LAPTM4A-202ENST00000483117 ADIRFQ15847 76 aa1.18□□□□□ -2.22
LAPTM4A-202ENST00000483117 ZNF720Q7Z2F6 126 aa1.18□□□□□ -2.22
LAPTM4A-202ENST00000483117 OBSCN-AS1Q96MR7 158 aa1.18□□□□□ -2.22
LAPTM4A-202ENST00000483117 TMEM14BQ9NUH8 114 aa1.18□□□□□ -2.22
LAPTM4A-202ENST00000483117 CLTCQ00610 1675 aaKnown RBP1.18□□□□□ -2.22
LAPTM4A-202ENST00000483117 EHBP1L1Q8N3D4 1523 aa1.18□□□□□ -2.22
LAPTM4A-202ENST00000483117 PPLO60437 1756 aa1.18□□□□□ -2.22
LAPTM4A-202ENST00000483117 TOP2BQ02880 1626 aa1.18□□□□□ -2.22
LAPTM4A-202ENST00000483117 PEAK1Q9H792 1746 aa1.18□□□□□ -2.22
LAPTM4A-202ENST00000483117 SPAG17Q6Q759 2223 aa1.17□□□□□ -2.22
LAPTM4A-202ENST00000483117 MYOFQ9NZM1 2061 aa1.17□□□□□ -2.22
LAPTM4A-202ENST00000483117 IGLC7A0M8Q6 106 aa1.17□□□□□ -2.22
LAPTM4A-202ENST00000483117 ACYP1P07311 99 aa1.17□□□□□ -2.22
LAPTM4A-202ENST00000483117 NMBP08949 121 aa1.17□□□□□ -2.22
LAPTM4A-202ENST00000483117 SNRPFP62306 86 aaKnown RBP1.17□□□□□ -2.22
LAPTM4A-202ENST00000483117 HMGN3Q15651 99 aa1.17□□□□□ -2.22
LAPTM4A-202ENST00000483117 PCOTHQ58A44 107 aa1.17□□□□□ -2.22
LAPTM4A-202ENST00000483117 BAGE3Q86Y29 109 aa1.17□□□□□ -2.22
LAPTM4A-202ENST00000483117 LINC00208Q96KT6 92 aa1.17□□□□□ -2.22
LAPTM4A-202ENST00000483117 LINC01600Q96MT4 127 aa1.17□□□□□ -2.22
LAPTM4A-202ENST00000483117 CCL19Q99731 98 aa1.17□□□□□ -2.22
LAPTM4A-202ENST00000483117 WFDC6Q9BQY6 131 aa1.17□□□□□ -2.22
LAPTM4A-202ENST00000483117 ST20Q9HBF5 79 aa1.17□□□□□ -2.22
LAPTM4A-202ENST00000483117 TNRC6AQ8NDV7 1962 aaKnown RBP1.17□□□□□ -2.22
LAPTM4A-202ENST00000483117 MRC1P22897 1456 aa1.17□□□□□ -2.22
LAPTM4A-202ENST00000483117 NRXN1Q9ULB1 1477 aa1.17□□□□□ -2.22
LAPTM4A-202ENST00000483117 TNRC6BQ9UPQ9 1833 aaKnown RBP1.17□□□□□ -2.22
LAPTM4A-202ENST00000483117 ICE1Q9Y2F5 2266 aa1.17□□□□□ -2.22
LAPTM4A-202ENST00000483117 EDC4Q6P2E9 1401 aaKnown RBP1.16□□□□□ -2.22
LAPTM4A-202ENST00000483117 TANC1Q9C0D5 1861 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms