RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 K7ERJ3 54 aa7.18□□□□□ -1.26
GARNL3-216ENST00000481242 ORMDL1Q9P0S3 153 aa7.18□□□□□ -1.26
GARNL3-216ENST00000481242 LY6G6DO95868 133 aa7.18□□□□□ -1.26
GARNL3-216ENST00000481242 RBM3P98179 157 aaKnown RBP7.17□□□□□ -1.26
GARNL3-216ENST00000481242 SPAG11BQ08648 103 aa7.17□□□□□ -1.26
GARNL3-216ENST00000481242 C20orf203Q8NBC4 194 aa7.17□□□□□ -1.26
GARNL3-216ENST00000481242 SND1-IT1Q9HBX3 110 aa7.17□□□□□ -1.26
GARNL3-216ENST00000481242 OPRPNQ99935 248 aaPredicted RBP7.17□□□□□ -1.26
GARNL3-216ENST00000481242 KLK12Q9UKR0 248 aa7.17□□□□□ -1.26
GARNL3-216ENST00000481242 IGLV10-54A0A075B6I4 117 aa7.17□□□□□ -1.26
GARNL3-216ENST00000481242 C19orf71A6NCJ1 209 aa7.17□□□□□ -1.26
GARNL3-216ENST00000481242 ODF1Q14990 250 aa7.17□□□□□ -1.26
GARNL3-216ENST00000481242 Q6ZPA2 131 aa7.17□□□□□ -1.26
GARNL3-216ENST00000481242 H7C423 109 aa7.17□□□□□ -1.26
GARNL3-216ENST00000481242 HAMPP81172 84 aa7.16□□□□□ -1.26
GARNL3-216ENST00000481242 TOMM6Q96B49 74 aa7.16□□□□□ -1.26
GARNL3-216ENST00000481242 EIF4EBP1Q13541 118 aaPredicted RBP7.16□□□□□ -1.26
GARNL3-216ENST00000481242 CEP295Q9C0D2 2601 aa7.16□□□□□ -1.26
GARNL3-216ENST00000481242 CARD19Q96LW7 228 aa7.16□□□□□ -1.26
GARNL3-216ENST00000481242 MUC22E2RYF6 1773 aaPredicted RBP7.16□□□□□ -1.26
GARNL3-216ENST00000481242 TRBV10-2A0A0K0K1G8 114 aa7.16□□□□□ -1.26
GARNL3-216ENST00000481242 FXYD2P54710 66 aa7.16□□□□□ -1.26
GARNL3-216ENST00000481242 BRWD1-AS2P59051 145 aa7.16□□□□□ -1.26
GARNL3-216ENST00000481242 USP9XQ93008 2570 aaPredicted RBP7.16□□□□□ -1.26
GARNL3-216ENST00000481242 LINC01548A6NM66 108 aa7.15□□□□□ -1.26
GARNL3-216ENST00000481242 ATP5EP56381 51 aaPredicted RBP7.15□□□□□ -1.26
GARNL3-216ENST00000481242 C1orf195Q5TG92 126 aa7.15□□□□□ -1.26
GARNL3-216ENST00000481242 ESM1Q9NQ30 184 aa7.15□□□□□ -1.26
GARNL3-216ENST00000481242 MDFICQ9P1T7 246 aa7.15□□□□□ -1.26
GARNL3-216ENST00000481242 ABCA12Q86UK0 2595 aa7.15□□□□□ -1.26
GARNL3-216ENST00000481242 CEP192Q8TEP8 1941 aa7.15□□□□□ -1.26
GARNL3-216ENST00000481242 A0A1B0GX51 115 aa7.15□□□□□ -1.27
GARNL3-216ENST00000481242 KIR2DL5BQ8NHK3 375 aa7.15□□□□□ -1.27
GARNL3-216ENST00000481242 LINC01006Q8NI28 216 aa7.15□□□□□ -1.27
GARNL3-216ENST00000481242 ANKRD11Q6UB99 2663 aaPredicted RBP7.15□□□□□ -1.27
GARNL3-216ENST00000481242 PRRC2AP48634 2157 aaKnown RBP7.15□□□□□ -1.27
GARNL3-216ENST00000481242 C11orf86A6NJI1 115 aa7.15□□□□□ -1.27
GARNL3-216ENST00000481242 PSMB8P28062 276 aa7.15□□□□□ -1.27
GARNL3-216ENST00000481242 LINC01620Q4KN68 170 aa7.15□□□□□ -1.27
GARNL3-216ENST00000481242 ZNF295-AS1Q8N0V1 137 aa7.15□□□□□ -1.27
GARNL3-216ENST00000481242 Q8N6K4 173 aa7.15□□□□□ -1.27
GARNL3-216ENST00000481242 CSDC2Q9Y534 153 aaKnown RBP7.15□□□□□ -1.27
GARNL3-216ENST00000481242 C4orf48Q5BLP8 95 aa7.14□□□□□ -1.27
GARNL3-216ENST00000481242 FAM222AQ5U5X8 452 aa7.14□□□□□ -1.27
GARNL3-216ENST00000481242 ASPHD1Q5U4P2 390 aa7.14□□□□□ -1.27
GARNL3-216ENST00000481242 PCNX3Q9H6A9 2034 aa7.14□□□□□ -1.27
GARNL3-216ENST00000481242 DEFB131BA0A096LNP1 70 aa7.14□□□□□ -1.27
GARNL3-216ENST00000481242 TNRC6AQ8NDV7 1962 aaKnown RBP7.14□□□□□ -1.27
GARNL3-216ENST00000481242 UBE2AP49459 152 aa7.13□□□□□ -1.27
GARNL3-216ENST00000481242 PCP2Q8IVA1 136 aa7.13□□□□□ -1.27
GARNL3-216ENST00000481242 LRRK2Q5S007 2527 aa7.13□□□□□ -1.27
GARNL3-216ENST00000481242 DEFB4AO15263 64 aa7.13□□□□□ -1.27
GARNL3-216ENST00000481242 NDUFB1O75438 58 aa7.13□□□□□ -1.27
GARNL3-216ENST00000481242 ZFAND3Q9H8U3 227 aa7.13□□□□□ -1.27
GARNL3-216ENST00000481242 ZNF702PQ9H963 129 aa7.13□□□□□ -1.27
GARNL3-216ENST00000481242 A0A1B0GXF2 115 aa7.13□□□□□ -1.27
GARNL3-216ENST00000481242 TLN2Q9Y4G6 2542 aa7.13□□□□□ -1.27
GARNL3-216ENST00000481242 hADV29S1A0JD25 119 aa7.13□□□□□ -1.27
GARNL3-216ENST00000481242 TRAV10A0A0B4J240 114 aa7.12□□□□□ -1.27
GARNL3-216ENST00000481242 IGHV1-58A0A0C4DH39 117 aa7.12□□□□□ -1.27
GARNL3-216ENST00000481242 TRBV6-4A0A1B0GX49 114 aa7.12□□□□□ -1.27
GARNL3-216ENST00000481242 Q6ZTI0 123 aa7.12□□□□□ -1.27
GARNL3-216ENST00000481242 BAALCQ8WXS3 180 aa7.12□□□□□ -1.27
GARNL3-216ENST00000481242 BAALC-AS2P0C853 105 aa7.12□□□□□ -1.27
GARNL3-216ENST00000481242 FAM240AA0A1B0GVK7 77 aa7.11□□□□□ -1.27
GARNL3-216ENST00000481242 IGLC6P0CF74 106 aa7.11□□□□□ -1.27
GARNL3-216ENST00000481242 RPL39P62891 51 aaKnown RBP7.11□□□□□ -1.27
GARNL3-216ENST00000481242 MLST8Q9BVC4 326 aa7.11□□□□□ -1.27
GARNL3-216ENST00000481242 ZNF462Q96JM2 2506 aa7.11□□□□□ -1.27
GARNL3-216ENST00000481242 RPS28P62857 69 aaKnown RBP7.11□□□□□ -1.27
GARNL3-216ENST00000481242 ARHGAP21Q5T5U3 1957 aa7.11□□□□□ -1.27
GARNL3-216ENST00000481242 IGLV2-8P01709 118 aa7.11□□□□□ -1.27
GARNL3-216ENST00000481242 DEFB1P60022 68 aa7.11□□□□□ -1.27
GARNL3-216ENST00000481242 NFE4Q86UQ8 179 aa7.11□□□□□ -1.27
GARNL3-216ENST00000481242 BRK1Q8WUW1 75 aa7.11□□□□□ -1.27
GARNL3-216ENST00000481242 DIRC1Q969H9 104 aa7.11□□□□□ -1.27
GARNL3-216ENST00000481242 NUP210LQ5VU65 1888 aa7.1□□□□□ -1.27
GARNL3-216ENST00000481242 NDUFC2-KCTD14E9PQ53 114 aa7.1□□□□□ -1.27
GARNL3-216ENST00000481242 USP9YO00507 2555 aaPredicted RBP7.1□□□□□ -1.27
GARNL3-216ENST00000481242 JMJD7-PLA2G4BH0Y9G9 81 aa7.1□□□□□ -1.27
GARNL3-216ENST00000481242 CCDC179H3BU77 68 aa7.1□□□□□ -1.27
GARNL3-216ENST00000481242 IGLV1-40P01703 118 aa7.1□□□□□ -1.27
GARNL3-216ENST00000481242 MRPS36P82909 103 aaKnown RBP7.1□□□□□ -1.27
GARNL3-216ENST00000481242 COX7CP15954 63 aa7.1□□□□□ -1.27
GARNL3-216ENST00000481242 PDE6GP18545 87 aa7.1□□□□□ -1.27
GARNL3-216ENST00000481242 LINC00173Q6ZV60 143 aa7.1□□□□□ -1.27
GARNL3-216ENST00000481242 REG3AQ06141 175 aa7.09□□□□□ -1.27
GARNL3-216ENST00000481242 FAM236DA0A1B0GTK5 79 aa7.09□□□□□ -1.27
GARNL3-216ENST00000481242 TINCRA0A1B0GVN0 87 aa7.09□□□□□ -1.27
GARNL3-216ENST00000481242 FAM236CP0DP71 79 aa7.09□□□□□ -1.27
GARNL3-216ENST00000481242 MUSTN1Q8IVN3 82 aa7.09□□□□□ -1.27
GARNL3-216ENST00000481242 DEFB105AQ8NG35 78 aa7.09□□□□□ -1.27
GARNL3-216ENST00000481242 XGP55808 180 aa7.08□□□□□ -1.28
GARNL3-216ENST00000481242 ZFAND2AQ8N6M9 145 aa7.08□□□□□ -1.28
GARNL3-216ENST00000481242 PRO0628Q9UI54 55 aa7.08□□□□□ -1.28
GARNL3-216ENST00000481242 ZNF580Q9UK33 172 aa7.08□□□□□ -1.28
GARNL3-216ENST00000481242 PLXNB1O43157 2135 aa7.08□□□□□ -1.28
GARNL3-216ENST00000481242 CRYGDP07320 174 aa7.08□□□□□ -1.28
GARNL3-216ENST00000481242 SEC61GP60059 68 aa7.08□□□□□ -1.28
GARNL3-216ENST00000481242 PIK3CD-AS1Q5SR53 167 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms