RNA–Protein interactions for RNA: ENST00000480321.1

MCF2L-225, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 5,727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-225ENST00000480321 ZFHX2Q9C0A1 2572 aaPredicted RBP10.31□□□□□ -0.76
MCF2L-225ENST00000480321 TMEM223A0PJW6 202 aa10.3□□□□□ -0.76
MCF2L-225ENST00000480321 MAP6D1Q9H9H5 199 aa10.3□□□□□ -0.76
MCF2L-225ENST00000480321 CHD3Q12873 2000 aaKnown RBP10.3□□□□□ -0.76
MCF2L-225ENST00000480321 Q8NA96 180 aa10.3□□□□□ -0.76
MCF2L-225ENST00000480321 TRBV12-3P01733 135 aa10.3□□□□□ -0.76
MCF2L-225ENST00000480321 COX7BP24311 80 aa10.3□□□□□ -0.76
MCF2L-225ENST00000480321 EBI3Q14213 229 aa10.3□□□□□ -0.76
MCF2L-225ENST00000480321 NDUFV3P56181 108 aaKnown RBP10.29□□□□□ -0.76
MCF2L-225ENST00000480321 UFSP1Q6NVU6 142 aa10.29□□□□□ -0.76
MCF2L-225ENST00000480321 TRBV30A0A0K0K1B3 111 aa10.29□□□□□ -0.76
MCF2L-225ENST00000480321 UQCRQO14949 82 aa10.29□□□□□ -0.76
MCF2L-225ENST00000480321 IL17DQ8TAD2 202 aa10.28□□□□□ -0.76
MCF2L-225ENST00000480321 A0A096LNI7 61 aa10.28□□□□□ -0.76
MCF2L-225ENST00000480321 LTBP2Q14767 1821 aa10.28□□□□□ -0.76
MCF2L-225ENST00000480321 HIVEP2P31629 2446 aa10.28□□□□□ -0.76
MCF2L-225ENST00000480321 ZFAND2AQ8N6M9 145 aa10.28□□□□□ -0.76
MCF2L-225ENST00000480321 TP53TG3Q9ULZ0 132 aa10.28□□□□□ -0.76
MCF2L-225ENST00000480321 WISP2O76076 250 aa10.27□□□□□ -0.76
MCF2L-225ENST00000480321 WFDC11Q8NEX6 87 aa10.27□□□□□ -0.76
MCF2L-225ENST00000480321 MUC6Q6W4X9 2439 aa10.27□□□□□ -0.77
MCF2L-225ENST00000480321 TRAV23DV6A0A075B6W5 121 aa10.27□□□□□ -0.77
MCF2L-225ENST00000480321 K7EQG2 157 aa10.27□□□□□ -0.77
MCF2L-225ENST00000480321 UPK3BQ9BT76 320 aa10.27□□□□□ -0.77
MCF2L-225ENST00000480321 TIMM17BO60830 172 aa10.26□□□□□ -0.77
MCF2L-225ENST00000480321 IGKV4-1P06312 121 aa10.26□□□□□ -0.77
MCF2L-225ENST00000480321 ZNF22P17026 224 aaPredicted RBP10.26□□□□□ -0.77
MCF2L-225ENST00000480321 SPTSSBQ8NFR3 76 aa10.26□□□□□ -0.77
MCF2L-225ENST00000480321 TP73-AS1Q9UF72 201 aa10.26□□□□□ -0.77
MCF2L-225ENST00000480321 MT-ATP8P03928 68 aa10.26□□□□□ -0.77
MCF2L-225ENST00000480321 SORL1Q92673 2214 aa10.26□□□□□ -0.77
MCF2L-225ENST00000480321 SMIM9A6NGZ8 99 aa10.26□□□□□ -0.77
MCF2L-225ENST00000480321 LY6LH3BQJ8 138 aa10.26□□□□□ -0.77
MCF2L-225ENST00000480321 PYGO1Q9Y3Y4 419 aa10.26□□□□□ -0.77
MCF2L-225ENST00000480321 IGKV2D-26A0A0A0MRZ7 120 aa10.25□□□□□ -0.77
MCF2L-225ENST00000480321 TRBV6-5A0A0K0K1A5 114 aa10.25□□□□□ -0.77
MCF2L-225ENST00000480321 IBA57-AS1B1ANH7 110 aa10.25□□□□□ -0.77
MCF2L-225ENST00000480321 B9D2Q9BPU9 175 aa10.25□□□□□ -0.77
MCF2L-225ENST00000480321 ADAMTS9Q9P2N4 1935 aa10.25□□□□□ -0.77
MCF2L-225ENST00000480321 CACNA1AO00555 2505 aa10.25□□□□□ -0.77
MCF2L-225ENST00000480321 LMO4P61968 165 aa10.25□□□□□ -0.77
MCF2L-225ENST00000480321 RNF185Q96GF1 192 aa10.25□□□□□ -0.77
MCF2L-225ENST00000480321 PRORYQ9H606 182 aa10.25□□□□□ -0.77
MCF2L-225ENST00000480321 MYO18BQ8IUG5 2567 aa10.25□□□□□ -0.77
MCF2L-225ENST00000480321 IGLV4-3A0A075B6K6 122 aa10.25□□□□□ -0.77
MCF2L-225ENST00000480321 CASC2Q6XLA1 102 aa10.25□□□□□ -0.77
MCF2L-225ENST00000480321 C11orf45Q8TAV5 145 aa10.25□□□□□ -0.77
MCF2L-225ENST00000480321 FAM110AQ9BQ89 295 aa10.25□□□□□ -0.77
MCF2L-225ENST00000480321 HIGD2AQ9BW72 106 aa10.25□□□□□ -0.77
MCF2L-225ENST00000480321 ZFAND3Q9H8U3 227 aa10.25□□□□□ -0.77
MCF2L-225ENST00000480321 LRRC75A-AS1Q8N1F1 130 aa10.24□□□□□ -0.77
MCF2L-225ENST00000480321 MPLKIPQ8TAP9 179 aa10.24□□□□□ -0.77
MCF2L-225ENST00000480321 C1orf229Q6ZS94 237 aaPredicted RBP10.24□□□□□ -0.77
MCF2L-225ENST00000480321 ACACBO00763 2458 aa10.23□□□□□ -0.77
MCF2L-225ENST00000480321 TNRC6BQ9UPQ9 1833 aaKnown RBP10.23□□□□□ -0.77
MCF2L-225ENST00000480321 C19orf84I3L1E1 186 aa10.23□□□□□ -0.77
MCF2L-225ENST00000480321 CRIP1P50238 77 aa10.23□□□□□ -0.77
MCF2L-225ENST00000480321 IMUPQ9GZP8 106 aa10.23□□□□□ -0.77
MCF2L-225ENST00000480321 LYRM9A8MSI8 78 aa10.23□□□□□ -0.77
MCF2L-225ENST00000480321 FAM222AQ5U5X8 452 aa10.23□□□□□ -0.77
MCF2L-225ENST00000480321 TRBV27A0A0K0K1C4 114 aa10.22□□□□□ -0.77
MCF2L-225ENST00000480321 COL4A4P53420 1690 aaPredicted RBP10.22□□□□□ -0.77
MCF2L-225ENST00000480321 LINC00308Q8TCZ7 52 aa10.22□□□□□ -0.77
MCF2L-225ENST00000480321 CEMP1Q6PRD7 247 aaPredicted RBP10.22□□□□□ -0.77
MCF2L-225ENST00000480321 M0QY20 66 aa10.22□□□□□ -0.77
MCF2L-225ENST00000480321 SDIM1Q6ZPB5 146 aa10.22□□□□□ -0.77
MCF2L-225ENST00000480321 SPG11Q96JI7 2443 aa10.22□□□□□ -0.77
MCF2L-225ENST00000480321 PTPN13Q12923 2485 aa10.22□□□□□ -0.77
MCF2L-225ENST00000480321 IGLV2-11P01706 119 aa10.22□□□□□ -0.77
MCF2L-225ENST00000480321 LINC00467Q9BRT7 94 aa10.22□□□□□ -0.77
MCF2L-225ENST00000480321 TEX49A0A1B0GTD5 131 aa10.21□□□□□ -0.77
MCF2L-225ENST00000480321 FAM236DA0A1B0GTK5 79 aa10.21□□□□□ -0.77
MCF2L-225ENST00000480321 FAM236CP0DP71 79 aa10.21□□□□□ -0.77
MCF2L-225ENST00000480321 IGHV4-31P0DP07 118 aa10.21□□□□□ -0.78
MCF2L-225ENST00000480321 C2orf16Q68DN1 1984 aa10.21□□□□□ -0.78
MCF2L-225ENST00000480321 BPY2O14599 106 aa10.21□□□□□ -0.78
MCF2L-225ENST00000480321 C20orf197Q8N268 126 aa10.21□□□□□ -0.78
MCF2L-225ENST00000480321 C3orf22Q8N5N4 141 aa10.21□□□□□ -0.78
MCF2L-225ENST00000480321 ALPK3Q96L96 1907 aa10.21□□□□□ -0.78
MCF2L-225ENST00000480321 C20orf173Q96LM9 149 aa10.2□□□□□ -0.78
MCF2L-225ENST00000480321 CSPG4Q6UVK1 2322 aa10.2□□□□□ -0.78
MCF2L-225ENST00000480321 C14orf177Q52M58 125 aa10.2□□□□□ -0.78
MCF2L-225ENST00000480321 CDKN2A-AS1Q9UH64 79 aa10.2□□□□□ -0.78
MCF2L-225ENST00000480321 A0A087WZ39 114 aa10.2□□□□□ -0.78
MCF2L-225ENST00000480321 MRPL55Q7Z7F7 128 aaKnown RBP10.2□□□□□ -0.78
MCF2L-225ENST00000480321 MAPKAPK5-AS1Q8N8E1 139 aa10.2□□□□□ -0.78
MCF2L-225ENST00000480321 Q6YL49 198 aa10.2□□□□□ -0.78
MCF2L-225ENST00000480321 LINC01548A6NM66 108 aa10.2□□□□□ -0.78
MCF2L-225ENST00000480321 TRIAP1O43715 76 aa10.19□□□□□ -0.78
MCF2L-225ENST00000480321 PLA2G5P39877 138 aa10.19□□□□□ -0.78
MCF2L-225ENST00000480321 REG3AQ06141 175 aa10.19□□□□□ -0.78
MCF2L-225ENST00000480321 INAFM1C9JVW0 142 aa10.18□□□□□ -0.78
MCF2L-225ENST00000480321 ATP5EP56381 51 aaPredicted RBP10.18□□□□□ -0.78
MCF2L-225ENST00000480321 RBX1P62877 108 aa10.18□□□□□ -0.78
MCF2L-225ENST00000480321 Q6ZTI0 123 aa10.18□□□□□ -0.78
MCF2L-225ENST00000480321 C2orf91Q6ZV80 131 aa10.18□□□□□ -0.78
MCF2L-225ENST00000480321 A0A0U1RQV1 116 aa10.18□□□□□ -0.78
MCF2L-225ENST00000480321 TRBV6-4A0A1B0GX49 114 aa10.18□□□□□ -0.78
MCF2L-225ENST00000480321 DEFB114Q30KQ6 69 aa10.18□□□□□ -0.78
MCF2L-225ENST00000480321 CFAP126Q5VTH2 177 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms