RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 IGHV3-30P01768 117 aa7.31□□□□□ -1.24
CCDC18-208ENST00000479653 IGHV3-33P01772 117 aa7.31□□□□□ -1.24
CCDC18-208ENST00000479653 MT-ND6P03923 174 aa7.31□□□□□ -1.24
CCDC18-208ENST00000479653 TRGC1P0CF51 173 aa7.31□□□□□ -1.24
CCDC18-208ENST00000479653 IGHV3-30-3P0DP02 117 aa7.31□□□□□ -1.24
CCDC18-208ENST00000479653 IGHV3-30-5P0DP03 117 aa7.31□□□□□ -1.24
CCDC18-208ENST00000479653 LINC01556Q5JQF7 62 aa7.31□□□□□ -1.24
CCDC18-208ENST00000479653 Q6ZRU5 148 aa7.31□□□□□ -1.24
CCDC18-208ENST00000479653 C9orf85Q96MD7 179 aa7.31□□□□□ -1.24
CCDC18-208ENST00000479653 YPEL4Q96NS1 127 aa7.31□□□□□ -1.24
CCDC18-208ENST00000479653 DPH3P1Q9H4G8 78 aa7.31□□□□□ -1.24
CCDC18-208ENST00000479653 MUC2Q02817 5179 aa7.31□□□□□ -1.24
CCDC18-208ENST00000479653 TGIF2-C20orf24A0A0A6YYL0 155 aa7.3□□□□□ -1.24
CCDC18-208ENST00000479653 A6NJY4 79 aa7.3□□□□□ -1.24
CCDC18-208ENST00000479653 COLCA2A8K830 154 aa7.3□□□□□ -1.24
CCDC18-208ENST00000479653 M0R2P5 195 aa7.3□□□□□ -1.24
CCDC18-208ENST00000479653 RNASE3P12724 160 aaKnown RBP7.3□□□□□ -1.24
CCDC18-208ENST00000479653 TWIST1Q15672 202 aa7.3□□□□□ -1.24
CCDC18-208ENST00000479653 MRPL54Q6P161 138 aaKnown RBP7.3□□□□□ -1.24
CCDC18-208ENST00000479653 BAALCQ8WXS3 180 aa7.3□□□□□ -1.24
CCDC18-208ENST00000479653 GNB1LQ9BYB4 327 aa7.3□□□□□ -1.24
CCDC18-208ENST00000479653 A0A1B0GXF2 115 aa7.29□□□□□ -1.24
CCDC18-208ENST00000479653 HLA-DQA1P01909 254 aa7.29□□□□□ -1.24
CCDC18-208ENST00000479653 RAB5AP20339 215 aa7.29□□□□□ -1.24
CCDC18-208ENST00000479653 NTF3P20783 257 aa7.29□□□□□ -1.24
CCDC18-208ENST00000479653 ODF1Q14990 250 aa7.29□□□□□ -1.24
CCDC18-208ENST00000479653 AP1S3Q96PC3 154 aa7.29□□□□□ -1.24
CCDC18-208ENST00000479653 TRAV8-6A0A0B4J262 113 aa7.28□□□□□ -1.24
CCDC18-208ENST00000479653 M0R381 172 aa7.28□□□□□ -1.24
CCDC18-208ENST00000479653 RPS10P46783 165 aaKnown RBP7.28□□□□□ -1.24
CCDC18-208ENST00000479653 CAMPP49913 170 aa7.28□□□□□ -1.24
CCDC18-208ENST00000479653 RAB4BP61018 213 aa7.28□□□□□ -1.24
CCDC18-208ENST00000479653 ZNF876PQ49A33 203 aa7.28□□□□□ -1.24
CCDC18-208ENST00000479653 OR10J3Q5JRS4 329 aa7.28□□□□□ -1.24
CCDC18-208ENST00000479653 OR10AG1Q8NH19 301 aa7.28□□□□□ -1.24
CCDC18-208ENST00000479653 A8MWV9 139 aa7.27□□□□□ -1.25
CCDC18-208ENST00000479653 SMIM17P0DL12 118 aa7.27□□□□□ -1.25
CCDC18-208ENST00000479653 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.27□□□□□ -1.25
CCDC18-208ENST00000479653 GATD1Q8NB37 220 aa7.27□□□□□ -1.25
CCDC18-208ENST00000479653 TMEM191AQ9H0A3 160 aa7.27□□□□□ -1.25
CCDC18-208ENST00000479653 CIDEAO60543 219 aa7.26□□□□□ -1.25
CCDC18-208ENST00000479653 Q8N976 141 aa7.26□□□□□ -1.25
CCDC18-208ENST00000479653 RASL10AQ92737 203 aa7.26□□□□□ -1.25
CCDC18-208ENST00000479653 ZNF479Q96JC4 524 aa7.26□□□□□ -1.25
CCDC18-208ENST00000479653 TRAPPC1Q9Y5R8 145 aa7.26□□□□□ -1.25
CCDC18-208ENST00000479653 MUC21A0A0G2JKD1 596 aa7.25□□□□□ -1.25
CCDC18-208ENST00000479653 LOC100131303A0A0U1RQF7 123 aa7.25□□□□□ -1.25
CCDC18-208ENST00000479653 MUC21A0A140T8X8 626 aa7.25□□□□□ -1.25
CCDC18-208ENST00000479653 RHODO00212 210 aa7.25□□□□□ -1.25
CCDC18-208ENST00000479653 APCSP02743 223 aa7.25□□□□□ -1.25
CCDC18-208ENST00000479653 SSTP61278 116 aa7.25□□□□□ -1.25
CCDC18-208ENST00000479653 LELP1Q5T871 98 aa7.25□□□□□ -1.25
CCDC18-208ENST00000479653 TMEM136Q6ZRR5 245 aa7.25□□□□□ -1.25
CCDC18-208ENST00000479653 C1orf196B1AJZ1 125 aa7.24□□□□□ -1.25
CCDC18-208ENST00000479653 PPBPP02775 128 aa7.24□□□□□ -1.25
CCDC18-208ENST00000479653 FABP9Q0Z7S8 132 aa7.24□□□□□ -1.25
CCDC18-208ENST00000479653 LAGE3Q14657 143 aa7.24□□□□□ -1.25
CCDC18-208ENST00000479653 FAM104BQ5XKR9 115 aa7.24□□□□□ -1.25
CCDC18-208ENST00000479653 SH2D6Q7Z4S9 175 aa7.24□□□□□ -1.25
CCDC18-208ENST00000479653 MRPL18Q9H0U6 180 aaKnown RBP7.24□□□□□ -1.25
CCDC18-208ENST00000479653 LPAP08519 4548 aa7.23□□□□□ -1.25
CCDC18-208ENST00000479653 TRAV8-3A0A0A6YYJ7 113 aa7.23□□□□□ -1.25
CCDC18-208ENST00000479653 PPP1R17O96001 155 aa7.23□□□□□ -1.25
CCDC18-208ENST00000479653 ZFP2Q6ZN57 461 aa7.23□□□□□ -1.25
CCDC18-208ENST00000479653 TRAV4A0A0B4J268 109 aa7.22□□□□□ -1.25
CCDC18-208ENST00000479653 TRGC2P03986 189 aa7.22□□□□□ -1.25
CCDC18-208ENST00000479653 TIRAPP58753 221 aa7.22□□□□□ -1.25
CCDC18-208ENST00000479653 RAB5BP61020 215 aa7.22□□□□□ -1.25
CCDC18-208ENST00000479653 C14orf178Q8N769 122 aaPredicted RBP7.22□□□□□ -1.25
CCDC18-208ENST00000479653 OR4C5Q8NGB2 326 aa7.22□□□□□ -1.25
CCDC18-208ENST00000479653 ATP6V0E2Q8NHE4 81 aa7.22□□□□□ -1.25
CCDC18-208ENST00000479653 MRAP2Q96G30 205 aa7.22□□□□□ -1.25
CCDC18-208ENST00000479653 KRTAP4-12Q9BQ66 201 aa7.22□□□□□ -1.25
CCDC18-208ENST00000479653 LAMTOR2Q9Y2Q5 125 aa7.22□□□□□ -1.25
CCDC18-208ENST00000479653 H7C1H1 209 aa7.21□□□□□ -1.26
CCDC18-208ENST00000479653 RAB4AP20338 218 aa7.21□□□□□ -1.26
CCDC18-208ENST00000479653 CKS2P33552 79 aa7.21□□□□□ -1.26
CCDC18-208ENST00000479653 AMN1Q8IY45 258 aa7.21□□□□□ -1.26
CCDC18-208ENST00000479653 ORMDL3Q8N138 153 aa7.21□□□□□ -1.26
CCDC18-208ENST00000479653 F5H697 171 aa7.2□□□□□ -1.26
CCDC18-208ENST00000479653 MGPP08493 103 aa7.2□□□□□ -1.26
CCDC18-208ENST00000479653 FAM74A4Q5TZK3 123 aa7.2□□□□□ -1.26
CCDC18-208ENST00000479653 CFAP126Q5VTH2 177 aa7.2□□□□□ -1.26
CCDC18-208ENST00000479653 COX11Q9Y6N1 276 aa7.2□□□□□ -1.26
CCDC18-208ENST00000479653 KIF25-AS1Q9Y6Z4 181 aa7.2□□□□□ -1.26
CCDC18-208ENST00000479653 FSIP2Q5CZC0 6907 aa7.2□□□□□ -1.26
CCDC18-208ENST00000479653 A0A087WWL8 130 aa7.19□□□□□ -1.26
CCDC18-208ENST00000479653 PHOX2AO14813 284 aa7.19□□□□□ -1.26
CCDC18-208ENST00000479653 ZNF56Q15929 161 aa7.19□□□□□ -1.26
CCDC18-208ENST00000479653 MRPL51Q4U2R6 128 aaKnown RBP7.19□□□□□ -1.26
CCDC18-208ENST00000479653 RNF185Q96GF1 192 aa7.19□□□□□ -1.26
CCDC18-208ENST00000479653 IGKV2D-24A0A075B6R9 120 aa7.18□□□□□ -1.26
CCDC18-208ENST00000479653 D6R8Y8 96 aa7.18□□□□□ -1.26
CCDC18-208ENST00000479653 LCE3BQ5TA77 95 aa7.18□□□□□ -1.26
CCDC18-208ENST00000479653 DAZ4Q86SG3 579 aaKnown RBP7.18□□□□□ -1.26
CCDC18-208ENST00000479653 LINC01600Q96MT4 127 aa7.18□□□□□ -1.26
CCDC18-208ENST00000479653 PRELID3AQ96N28 172 aa7.18□□□□□ -1.26
CCDC18-208ENST00000479653 ALKBH7Q9BT30 221 aaPredicted RBP7.18□□□□□ -1.26
CCDC18-208ENST00000479653 JPT2Q9H910 190 aa7.18□□□□□ -1.26
CCDC18-208ENST00000479653 DAZ3Q9NR90 486 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms