RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 DAZ4Q86SG3 579 aaKnown RBP9□□□□□ -0.97
CHD3-210ENST00000479080 NIT1Q86X76 327 aa9□□□□□ -0.97
CHD3-210ENST00000479080 GTSF1LQ9H1H1 148 aa9□□□□□ -0.97
CHD3-210ENST00000479080 DAZ3Q9NR90 486 aaKnown RBP9□□□□□ -0.97
CHD3-210ENST00000479080 DNAH6Q9C0G6 4158 aa8.99□□□□□ -0.97
CHD3-210ENST00000479080 SERF1AO75920 110 aa8.99□□□□□ -0.97
CHD3-210ENST00000479080 PMCHP20382 165 aa8.99□□□□□ -0.97
CHD3-210ENST00000479080 TIRAPP58753 221 aa8.99□□□□□ -0.97
CHD3-210ENST00000479080 COA6Q5JTJ3 125 aaKnown RBP8.99□□□□□ -0.97
CHD3-210ENST00000479080 NXT2Q9NPJ8 142 aaKnown RBP8.99□□□□□ -0.97
CHD3-210ENST00000479080 TRBV6-8A0A0A6YYG3 113 aa8.98□□□□□ -0.97
CHD3-210ENST00000479080 COTL1Q14019 142 aa8.98□□□□□ -0.97
CHD3-210ENST00000479080 CASC10Q5T4H9 136 aa8.98□□□□□ -0.97
CHD3-210ENST00000479080 Q8N3U1 123 aa8.98□□□□□ -0.97
CHD3-210ENST00000479080 LINC00588Q9Y4M8 146 aa8.98□□□□□ -0.97
CHD3-210ENST00000479080 HYDINQ4G0P3 5121 aa8.97□□□□□ -0.97
CHD3-210ENST00000479080 LINC00614P0C842 121 aa8.97□□□□□ -0.97
CHD3-210ENST00000479080 RAB5BP61020 215 aa8.97□□□□□ -0.97
CHD3-210ENST00000479080 RNASEKQ6P5S7 137 aaKnown RBP8.97□□□□□ -0.97
CHD3-210ENST00000479080 PRSS3P2Q8NHM4 247 aa8.97□□□□□ -0.97
CHD3-210ENST00000479080 KLK5Q9Y337 293 aaPredicted RBP8.97□□□□□ -0.97
CHD3-210ENST00000479080 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.96□□□□□ -0.98
CHD3-210ENST00000479080 IGKV2-29A2NJV5 120 aaPredicted RBP8.96□□□□□ -0.98
CHD3-210ENST00000479080 NDUFA6P56556 154 aa8.96□□□□□ -0.98
CHD3-210ENST00000479080 RPL39P62891 51 aaKnown RBP8.96□□□□□ -0.98
CHD3-210ENST00000479080 PMCHL1Q16048 86 aa8.96□□□□□ -0.98
CHD3-210ENST00000479080 LELP1Q5T871 98 aa8.96□□□□□ -0.98
CHD3-210ENST00000479080 FA2HQ7L5A8 372 aa8.96□□□□□ -0.98
CHD3-210ENST00000479080 SH2D6Q7Z4S9 175 aa8.96□□□□□ -0.98
CHD3-210ENST00000479080 BAGE3Q86Y29 109 aa8.96□□□□□ -0.98
CHD3-210ENST00000479080 WFDC10BQ8IUB3 73 aa8.96□□□□□ -0.98
CHD3-210ENST00000479080 FAM104AQ969W3 186 aa8.96□□□□□ -0.98
CHD3-210ENST00000479080 RYR2Q92736 4967 aa8.95□□□□□ -0.98
CHD3-210ENST00000479080 IGHV1-24A0A0C4DH33 117 aa8.95□□□□□ -0.98
CHD3-210ENST00000479080 AMTP48728 403 aa8.95□□□□□ -0.98
CHD3-210ENST00000479080 LAGE3Q14657 143 aa8.95□□□□□ -0.98
CHD3-210ENST00000479080 C20orf203Q8NBC4 194 aa8.95□□□□□ -0.98
CHD3-210ENST00000479080 KIR2DL4Q99706 377 aa8.95□□□□□ -0.98
CHD3-210ENST00000479080 MRPS16Q9Y3D3 137 aaKnown RBP8.95□□□□□ -0.98
CHD3-210ENST00000479080 C3orf84H3BNL1 204 aa8.94□□□□□ -0.98
CHD3-210ENST00000479080 FCER1GP30273 86 aa8.94□□□□□ -0.98
CHD3-210ENST00000479080 CHCHD1Q96BP2 118 aaKnown RBP8.94□□□□□ -0.98
CHD3-210ENST00000479080 AP5S1Q9NUS5 200 aa8.94□□□□□ -0.98
CHD3-210ENST00000479080 TRBV25-1A0A075B6N4 114 aa8.93□□□□□ -0.98
CHD3-210ENST00000479080 TCTAP57738 103 aa8.93□□□□□ -0.98
CHD3-210ENST00000479080 GAGE6Q13070 117 aa8.93□□□□□ -0.98
CHD3-210ENST00000479080 FAM19A2Q8N3H0 131 aa8.93□□□□□ -0.98
CHD3-210ENST00000479080 TMEM243Q9BU79 118 aa8.93□□□□□ -0.98
CHD3-210ENST00000479080 TMA7Q9Y2S6 64 aaKnown RBP8.93□□□□□ -0.98
CHD3-210ENST00000479080 TENM2Q9NT68 2774 aa8.92□□□□□ -0.98
CHD3-210ENST00000479080 IFITM10A6NMD0 228 aa8.92□□□□□ -0.98
CHD3-210ENST00000479080 K7EMI3 77 aa8.92□□□□□ -0.98
CHD3-210ENST00000479080 ORMDL2Q53FV1 153 aa8.92□□□□□ -0.98
CHD3-210ENST00000479080 TMEM97Q5BJF2 176 aa8.92□□□□□ -0.98
CHD3-210ENST00000479080 PDZD11Q5EBL8 140 aa8.92□□□□□ -0.98
CHD3-210ENST00000479080 C2orf66Q6UXQ4 117 aa8.92□□□□□ -0.98
CHD3-210ENST00000479080 LINC00173Q6ZV60 143 aa8.92□□□□□ -0.98
CHD3-210ENST00000479080 UPK3BQ9BT76 320 aa8.92□□□□□ -0.98
CHD3-210ENST00000479080 UBE2D4Q9Y2X8 147 aa8.92□□□□□ -0.98
CHD3-210ENST00000479080 IGLV4-60A0A075B6I1 120 aa8.91□□□□□ -0.98
CHD3-210ENST00000479080 MPV17L2Q567V2 206 aa8.91□□□□□ -0.98
CHD3-210ENST00000479080 TOMM6Q96B49 74 aa8.91□□□□□ -0.98
CHD3-210ENST00000479080 DNAH2Q9P225 4427 aa8.91□□□□□ -0.98
CHD3-210ENST00000479080 KMT2CQ8NEZ4 4911 aaKnown RBP8.91□□□□□ -0.98
CHD3-210ENST00000479080 C5orf52A6NGY3 159 aa8.9□□□□□ -0.98
CHD3-210ENST00000479080 IGIPA6NJ69 53 aa8.9□□□□□ -0.98
CHD3-210ENST00000479080 HSBP1O75506 76 aa8.9□□□□□ -0.98
CHD3-210ENST00000479080 FGF6P10767 208 aa8.9□□□□□ -0.98
CHD3-210ENST00000479080 BTF3P20290 206 aaKnown RBP8.9□□□□□ -0.98
CHD3-210ENST00000479080 MRPL52Q86TS9 123 aaKnown RBP8.9□□□□□ -0.98
CHD3-210ENST00000479080 HIST3H2BBQ8N257 126 aa8.9□□□□□ -0.98
CHD3-210ENST00000479080 Q8N976 141 aa8.9□□□□□ -0.98
CHD3-210ENST00000479080 OPRPNQ99935 248 aaPredicted RBP8.9□□□□□ -0.98
CHD3-210ENST00000479080 CHCHD5Q9BSY4 110 aa8.9□□□□□ -0.98
CHD3-210ENST00000479080 DNAH10Q8IVF4 4471 aa8.89□□□□□ -0.99
CHD3-210ENST00000479080 KMT2AQ03164 3969 aa8.89□□□□□ -0.99
CHD3-210ENST00000479080 HBDP02042 147 aa8.89□□□□□ -0.99
CHD3-210ENST00000479080 CCL18P55774 89 aa8.89□□□□□ -0.99
CHD3-210ENST00000479080 SNRPEP62304 92 aaKnown RBP8.89□□□□□ -0.99
CHD3-210ENST00000479080 RBX1P62877 108 aa8.89□□□□□ -0.99
CHD3-210ENST00000479080 ZC2HC1BQ5TFG8 222 aa8.88□□□□□ -0.99
CHD3-210ENST00000479080 Q6ZUT4 128 aa8.88□□□□□ -0.99
CHD3-210ENST00000479080 KRTAP1-5Q9BYS1 174 aa8.88□□□□□ -0.99
CHD3-210ENST00000479080 CYSLTR1Q9Y271 337 aa8.88□□□□□ -0.99
CHD3-210ENST00000479080 IGLV4-3A0A075B6K6 122 aa8.87□□□□□ -0.99
CHD3-210ENST00000479080 TRAV8-6A0A0B4J262 113 aa8.87□□□□□ -0.99
CHD3-210ENST00000479080 H7C423 109 aa8.87□□□□□ -0.99
CHD3-210ENST00000479080 DNAH10OSP0CZ25 163 aa8.87□□□□□ -0.99
CHD3-210ENST00000479080 LINC01556Q5JQF7 62 aa8.87□□□□□ -0.99
CHD3-210ENST00000479080 LINC00476Q8WZB0 136 aa8.87□□□□□ -0.99
CHD3-210ENST00000479080 TIMM21Q9BVV7 248 aa8.87□□□□□ -0.99
CHD3-210ENST00000479080 RYR3Q15413 4870 aa8.86□□□□□ -0.99
CHD3-210ENST00000479080 IGHV3-30P01768 117 aa8.86□□□□□ -0.99
CHD3-210ENST00000479080 IGHV3-33P01772 117 aa8.86□□□□□ -0.99
CHD3-210ENST00000479080 IGHV3-30-3P0DP02 117 aa8.86□□□□□ -0.99
CHD3-210ENST00000479080 IGHV3-30-5P0DP03 117 aa8.86□□□□□ -0.99
CHD3-210ENST00000479080 RNASE13Q5GAN3 156 aaKnown RBP8.86□□□□□ -0.99
CHD3-210ENST00000479080 LGALS9CQ6DKI2 356 aa8.86□□□□□ -0.99
CHD3-210ENST00000479080 PYGO1Q9Y3Y4 419 aa8.86□□□□□ -0.99
CHD3-210ENST00000479080 A0A1B0GUV1 79 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms