RNA–Protein interactions for RNA: ENST00000479004.1

TRIM8-203, Transcript of tripartite motif containing 8, humanhuman

TSL 2

Gene TRIM8, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-203ENST00000479004 LAGE3Q14657 143 aa13.63□□□□□ -0.23
TRIM8-203ENST00000479004 AMN1Q8IY45 258 aa13.63□□□□□ -0.23
TRIM8-203ENST00000479004 NEXN-AS1Q8NBZ9 246 aa13.63□□□□□ -0.23
TRIM8-203ENST00000479004 FAM104BQ5XKR9 115 aa13.62□□□□□ -0.23
TRIM8-203ENST00000479004 Q8N3U1 123 aa13.62□□□□□ -0.23
TRIM8-203ENST00000479004 MRAP2Q96G30 205 aa13.62□□□□□ -0.23
TRIM8-203ENST00000479004 RNF185Q96GF1 192 aa13.62□□□□□ -0.23
TRIM8-203ENST00000479004 GCSHP23434 173 aa13.61□□□□□ -0.23
TRIM8-203ENST00000479004 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.61□□□□□ -0.23
TRIM8-203ENST00000479004 NIT2Q9NQR4 276 aa13.61□□□□□ -0.23
TRIM8-203ENST00000479004 URGCP-MRPS24S4R325 110 aa13.61□□□□□ -0.23
TRIM8-203ENST00000479004 TRAV26-2A0A0B4J265 109 aa13.6□□□□□ -0.23
TRIM8-203ENST00000479004 UBE2D3P61077 147 aa13.6□□□□□ -0.23
TRIM8-203ENST00000479004 UBE2D2P62837 147 aa13.6□□□□□ -0.23
TRIM8-203ENST00000479004 Q8N814 137 aa13.59□□□□□ -0.23
TRIM8-203ENST00000479004 IGLV5-52A0A0A0MRZ9 124 aa13.58□□□□□ -0.24
TRIM8-203ENST00000479004 ATRAIDQ6UW56 229 aa13.58□□□□□ -0.24
TRIM8-203ENST00000479004 DAZ4Q86SG3 579 aaKnown RBP13.58□□□□□ -0.24
TRIM8-203ENST00000479004 NTN5Q8WTR8 489 aaPredicted RBP13.58□□□□□ -0.24
TRIM8-203ENST00000479004 TM2D2Q9BX73 214 aa13.58□□□□□ -0.24
TRIM8-203ENST00000479004 DAZ3Q9NR90 486 aaKnown RBP13.58□□□□□ -0.24
TRIM8-203ENST00000479004 TRAV8-3A0A0A6YYJ7 113 aa13.57□□□□□ -0.24
TRIM8-203ENST00000479004 PPP1R17O96001 155 aa13.57□□□□□ -0.24
TRIM8-203ENST00000479004 COX19Q49B96 90 aa13.57□□□□□ -0.24
TRIM8-203ENST00000479004 MRPL51Q4U2R6 128 aaKnown RBP13.57□□□□□ -0.24
TRIM8-203ENST00000479004 EPM2AB3EWF7 344 aa13.55□□□□□ -0.24
TRIM8-203ENST00000479004 CKS2P33552 79 aa13.55□□□□□ -0.24
TRIM8-203ENST00000479004 TMEM97Q5BJF2 176 aa13.55□□□□□ -0.24
TRIM8-203ENST00000479004 NIT1Q86X76 327 aa13.55□□□□□ -0.24
TRIM8-203ENST00000479004 RPL39LQ96EH5 51 aaKnown RBP13.55□□□□□ -0.24
TRIM8-203ENST00000479004 TRBV6-5A0A0K0K1A5 114 aa13.54□□□□□ -0.24
TRIM8-203ENST00000479004 PPBPP02775 128 aa13.54□□□□□ -0.24
TRIM8-203ENST00000479004 ELOBQ15370 118 aa13.54□□□□□ -0.24
TRIM8-203ENST00000479004 TMEM136Q6ZRR5 245 aa13.54□□□□□ -0.24
TRIM8-203ENST00000479004 SMCO4Q9NRQ5 59 aa13.54□□□□□ -0.24
TRIM8-203ENST00000479004 SMKR1H3BMG3 65 aa13.53□□□□□ -0.24
TRIM8-203ENST00000479004 NCR2O95944 276 aa13.53□□□□□ -0.24
TRIM8-203ENST00000479004 GNB1LQ9BYB4 327 aa13.53□□□□□ -0.24
TRIM8-203ENST00000479004 ST20Q9HBF5 79 aa13.53□□□□□ -0.24
TRIM8-203ENST00000479004 TRBV24-1A0A075B6N3 115 aa13.52□□□□□ -0.25
TRIM8-203ENST00000479004 GAS8-AS1O95177 125 aa13.52□□□□□ -0.25
TRIM8-203ENST00000479004 HLA-DQA1P01909 254 aa13.52□□□□□ -0.25
TRIM8-203ENST00000479004 WFDC2Q14508 124 aa13.52□□□□□ -0.25
TRIM8-203ENST00000479004 TGIF2-C20orf24A0A0A6YYL0 155 aa13.51□□□□□ -0.25
TRIM8-203ENST00000479004 D6R8Y8 96 aa13.51□□□□□ -0.25
TRIM8-203ENST00000479004 RPS10P46783 165 aaKnown RBP13.51□□□□□ -0.25
TRIM8-203ENST00000479004 ORMDL3Q8N138 153 aa13.51□□□□□ -0.25
TRIM8-203ENST00000479004 NRACQ8N912 160 aa13.51□□□□□ -0.25
TRIM8-203ENST00000479004 SDHAF1A6NFY7 115 aa13.5□□□□□ -0.25
TRIM8-203ENST00000479004 MT-ND6P03923 174 aa13.5□□□□□ -0.25
TRIM8-203ENST00000479004 TMEM70Q9BUB7 260 aa13.5□□□□□ -0.25
TRIM8-203ENST00000479004 CHCHD7Q9BUK0 85 aa13.5□□□□□ -0.25
TRIM8-203ENST00000479004 COX11Q9Y6N1 276 aa13.5□□□□□ -0.25
TRIM8-203ENST00000479004 TRBV6-8A0A0A6YYG3 113 aa13.49□□□□□ -0.25
TRIM8-203ENST00000479004 PHOX2AO14813 284 aa13.49□□□□□ -0.25
TRIM8-203ENST00000479004 APCSP02743 223 aa13.49□□□□□ -0.25
TRIM8-203ENST00000479004 CBLN2Q8IUK8 224 aa13.49□□□□□ -0.25
TRIM8-203ENST00000479004 C20orf78Q9BR46 151 aa13.49□□□□□ -0.25
TRIM8-203ENST00000479004 KLK12Q9UKR0 248 aa13.49□□□□□ -0.25
TRIM8-203ENST00000479004 A0A087WX48 190 aa13.48□□□□□ -0.25
TRIM8-203ENST00000479004 SUMO2P61956 95 aaKnown RBP13.48□□□□□ -0.25
TRIM8-203ENST00000479004 COTL1Q14019 142 aa13.48□□□□□ -0.25
TRIM8-203ENST00000479004 Q5VSD8 79 aa13.48□□□□□ -0.25
TRIM8-203ENST00000479004 RMI2Q96E14 147 aa13.48□□□□□ -0.25
TRIM8-203ENST00000479004 PRELID3AQ96N28 172 aa13.48□□□□□ -0.25
TRIM8-203ENST00000479004 YPEL4Q96NS1 127 aa13.48□□□□□ -0.25
TRIM8-203ENST00000479004 LAMTOR2Q9Y2Q5 125 aa13.48□□□□□ -0.25
TRIM8-203ENST00000479004 I3L3M4 83 aa13.47□□□□□ -0.25
TRIM8-203ENST00000479004 TNFRSF6BO95407 300 aa13.47□□□□□ -0.25
TRIM8-203ENST00000479004 PMCHP20382 165 aa13.47□□□□□ -0.25
TRIM8-203ENST00000479004 POLR2KP53803 58 aaKnown RBP13.47□□□□□ -0.25
TRIM8-203ENST00000479004 BAALCQ8WXS3 180 aa13.47□□□□□ -0.25
TRIM8-203ENST00000479004 TRBV25-1A0A075B6N4 114 aa13.46□□□□□ -0.25
TRIM8-203ENST00000479004 IGHV1-24A0A0C4DH33 117 aa13.46□□□□□ -0.25
TRIM8-203ENST00000479004 VCYO14598 125 aa13.46□□□□□ -0.25
TRIM8-203ENST00000479004 LECT2O14960 151 aa13.46□□□□□ -0.25
TRIM8-203ENST00000479004 SMR3BP02814 79 aaPredicted RBP13.46□□□□□ -0.25
TRIM8-203ENST00000479004 HAMPP81172 84 aa13.46□□□□□ -0.25
TRIM8-203ENST00000479004 NTM-AS1Q6ZSK4 140 aa13.46□□□□□ -0.25
TRIM8-203ENST00000479004 IGKV2D-24A0A075B6R9 120 aa13.45□□□□□ -0.26
TRIM8-203ENST00000479004 TRBV27A0A0K0K1C4 114 aa13.45□□□□□ -0.26
TRIM8-203ENST00000479004 NPYP01303 97 aa13.45□□□□□ -0.26
TRIM8-203ENST00000479004 S100A1P23297 94 aa13.45□□□□□ -0.26
TRIM8-203ENST00000479004 RPL32P62910 135 aaKnown RBP13.45□□□□□ -0.26
TRIM8-203ENST00000479004 IQCJQ1A5X6 159 aa13.45□□□□□ -0.26
TRIM8-203ENST00000479004 UBE2WQ96B02 151 aa13.45□□□□□ -0.26
TRIM8-203ENST00000479004 MRPL18Q9H0U6 180 aaKnown RBP13.45□□□□□ -0.26
TRIM8-203ENST00000479004 FAM30AQ9NZY2 134 aa13.45□□□□□ -0.26
TRIM8-203ENST00000479004 HERC1Q15751 4861 aa13.45□□□□□ -0.26
TRIM8-203ENST00000479004 TMEM262E9PQX1 116 aa13.44□□□□□ -0.26
TRIM8-203ENST00000479004 PKIAP61925 76 aa13.44□□□□□ -0.26
TRIM8-203ENST00000479004 INAFM2P0DMQ5 153 aa13.43□□□□□ -0.26
TRIM8-203ENST00000479004 FABP9Q0Z7S8 132 aa13.43□□□□□ -0.26
TRIM8-203ENST00000479004 KIAA1644Q3SXP7 199 aa13.43□□□□□ -0.26
TRIM8-203ENST00000479004 TRAPPC1Q9Y5R8 145 aa13.43□□□□□ -0.26
TRIM8-203ENST00000479004 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.42□□□□□ -0.26
TRIM8-203ENST00000479004 ATP6V1G1O75348 118 aa13.42□□□□□ -0.26
TRIM8-203ENST00000479004 AMTP48728 403 aa13.42□□□□□ -0.26
TRIM8-203ENST00000479004 Q0VG73 95 aa13.42□□□□□ -0.26
TRIM8-203ENST00000479004 KIR2DL4Q99706 377 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms