RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 A4D1N5 150 aa10.66□□□□□ -0.7
NPHP4-208ENST00000478423 ZFAND6Q6FIF0 208 aa10.66□□□□□ -0.7
NPHP4-208ENST00000478423 RMI2Q96E14 147 aa10.66□□□□□ -0.7
NPHP4-208ENST00000478423 PSMG3-AS1Q96PY0 264 aa10.66□□□□□ -0.7
NPHP4-208ENST00000478423 E9PLD3 99 aa10.66□□□□□ -0.7
NPHP4-208ENST00000478423 KRTAP10-9P60411 292 aa10.66□□□□□ -0.7
NPHP4-208ENST00000478423 CEMP1Q6PRD7 247 aaPredicted RBP10.66□□□□□ -0.7
NPHP4-208ENST00000478423 TRBV10-1A0A0K0K1A3 114 aa10.66□□□□□ -0.7
NPHP4-208ENST00000478423 PPDPFLQ8WWR9 84 aa10.66□□□□□ -0.7
NPHP4-208ENST00000478423 ZNF702PQ9H963 129 aa10.66□□□□□ -0.7
NPHP4-208ENST00000478423 HERV-K104P63124 156 aa10.66□□□□□ -0.7
NPHP4-208ENST00000478423 SPATA12Q7Z6I5 190 aa10.66□□□□□ -0.7
NPHP4-208ENST00000478423 TEX48A0A1B0GUV7 120 aa10.65□□□□□ -0.7
NPHP4-208ENST00000478423 INAFM2P0DMQ5 153 aa10.65□□□□□ -0.7
NPHP4-208ENST00000478423 PRO0255Q9UI72 69 aa10.65□□□□□ -0.7
NPHP4-208ENST00000478423 F8WEM9 126 aa10.65□□□□□ -0.7
NPHP4-208ENST00000478423 PRSS47A8MTI9 375 aa10.65□□□□□ -0.7
NPHP4-208ENST00000478423 IGHV3-30P01768 117 aa10.65□□□□□ -0.7
NPHP4-208ENST00000478423 IGHV3-33P01772 117 aa10.65□□□□□ -0.7
NPHP4-208ENST00000478423 IGHV3-30-3P0DP02 117 aa10.65□□□□□ -0.7
NPHP4-208ENST00000478423 IGHV3-30-5P0DP03 117 aa10.65□□□□□ -0.7
NPHP4-208ENST00000478423 VSIG2Q96IQ7 327 aa10.65□□□□□ -0.7
NPHP4-208ENST00000478423 TRAV4A0A0B4J268 109 aa10.64□□□□□ -0.71
NPHP4-208ENST00000478423 NDUFA11Q86Y39 141 aa10.64□□□□□ -0.71
NPHP4-208ENST00000478423 MUSTN1Q8IVN3 82 aa10.64□□□□□ -0.71
NPHP4-208ENST00000478423 PRUNE2Q8WUY3 3088 aa10.64□□□□□ -0.71
NPHP4-208ENST00000478423 COX7A2LO14548 114 aa10.64□□□□□ -0.71
NPHP4-208ENST00000478423 SH2D6Q7Z4S9 175 aa10.64□□□□□ -0.71
NPHP4-208ENST00000478423 CARD19Q96LW7 228 aa10.64□□□□□ -0.71
NPHP4-208ENST00000478423 DAND5Q8N907 189 aa10.64□□□□□ -0.71
NPHP4-208ENST00000478423 LINC01006Q8NI28 216 aa10.64□□□□□ -0.71
NPHP4-208ENST00000478423 IFITM1P13164 125 aa10.63□□□□□ -0.71
NPHP4-208ENST00000478423 SOCS3O14543 225 aa10.63□□□□□ -0.71
NPHP4-208ENST00000478423 IGLV1-40P01703 118 aa10.63□□□□□ -0.71
NPHP4-208ENST00000478423 CHD9Q3L8U1 2897 aa10.63□□□□□ -0.71
NPHP4-208ENST00000478423 IGLL5B9A064 214 aa10.62□□□□□ -0.71
NPHP4-208ENST00000478423 HIGD1BQ9P298 99 aa10.62□□□□□ -0.71
NPHP4-208ENST00000478423 XIRP2A4UGR9 3374 aa10.62□□□□□ -0.71
NPHP4-208ENST00000478423 CFAP54Q96N23 3096 aa10.62□□□□□ -0.71
NPHP4-208ENST00000478423 CCL18P55774 89 aa10.62□□□□□ -0.71
NPHP4-208ENST00000478423 SND1-IT1Q9HBX3 110 aa10.61□□□□□ -0.71
NPHP4-208ENST00000478423 C11orf21Q9P2W6 132 aa10.61□□□□□ -0.71
NPHP4-208ENST00000478423 C18orf65Q6ZTR6 163 aa10.61□□□□□ -0.71
NPHP4-208ENST00000478423 Q6ZUT4 128 aa10.61□□□□□ -0.71
NPHP4-208ENST00000478423 NTN5Q8WTR8 489 aaPredicted RBP10.61□□□□□ -0.71
NPHP4-208ENST00000478423 CAMK2N2Q96S95 79 aa10.61□□□□□ -0.71
NPHP4-208ENST00000478423 KLK12Q9UKR0 248 aa10.61□□□□□ -0.71
NPHP4-208ENST00000478423 COX7B2Q8TF08 81 aa10.6□□□□□ -0.71
NPHP4-208ENST00000478423 PRR9Q5T870 116 aa10.6□□□□□ -0.71
NPHP4-208ENST00000478423 HECTD1Q9ULT8 2610 aa10.6□□□□□ -0.71
NPHP4-208ENST00000478423 LY6G6DO95868 133 aa10.59□□□□□ -0.71
NPHP4-208ENST00000478423 RAI1Q7Z5J4 1906 aaPredicted RBP10.59□□□□□ -0.71
NPHP4-208ENST00000478423 FAM222AQ5U5X8 452 aa10.59□□□□□ -0.71
NPHP4-208ENST00000478423 CENPEQ02224 2701 aa10.59□□□□□ -0.71
NPHP4-208ENST00000478423 RNF185Q96GF1 192 aa10.58□□□□□ -0.72
NPHP4-208ENST00000478423 IGHV1-58A0A0C4DH39 117 aa10.58□□□□□ -0.72
NPHP4-208ENST00000478423 LINC00482Q8N8I6 264 aa10.57□□□□□ -0.72
NPHP4-208ENST00000478423 TMEM126AQ9H061 195 aa10.57□□□□□ -0.72
NPHP4-208ENST00000478423 RNASE3P12724 160 aaKnown RBP10.57□□□□□ -0.72
NPHP4-208ENST00000478423 M0QY20 66 aa10.57□□□□□ -0.72
NPHP4-208ENST00000478423 CDH23Q9H251 3354 aa10.57□□□□□ -0.72
NPHP4-208ENST00000478423 TAX1BP3O14907 124 aa10.56□□□□□ -0.72
NPHP4-208ENST00000478423 DCANP1Q8TF63 244 aa10.56□□□□□ -0.72
NPHP4-208ENST00000478423 BPTFQ12830 3046 aa10.56□□□□□ -0.72
NPHP4-208ENST00000478423 TRAV26-1A0A087WT03 109 aa10.56□□□□□ -0.72
NPHP4-208ENST00000478423 KLLNB2CW77 178 aa10.56□□□□□ -0.72
NPHP4-208ENST00000478423 PROK1P58294 105 aa10.56□□□□□ -0.72
NPHP4-208ENST00000478423 HILS1P60008 231 aa10.55□□□□□ -0.72
NPHP4-208ENST00000478423 COL4A2P08572 1712 aa10.55□□□□□ -0.72
NPHP4-208ENST00000478423 F8P00451 2351 aa10.55□□□□□ -0.72
NPHP4-208ENST00000478423 PLA2G2AP14555 144 aa10.55□□□□□ -0.72
NPHP4-208ENST00000478423 TP73-AS1Q9UF72 201 aa10.55□□□□□ -0.72
NPHP4-208ENST00000478423 TINCRA0A1B0GVN0 87 aa10.55□□□□□ -0.72
NPHP4-208ENST00000478423 F8W735 103 aaPredicted RBP10.55□□□□□ -0.72
NPHP4-208ENST00000478423 MRPS12O15235 138 aaKnown RBP10.55□□□□□ -0.72
NPHP4-208ENST00000478423 LINC00467Q9BRT7 94 aa10.55□□□□□ -0.72
NPHP4-208ENST00000478423 WFDC10AQ9H1F0 79 aa10.54□□□□□ -0.72
NPHP4-208ENST00000478423 PRM2P04554 102 aa10.54□□□□□ -0.72
NPHP4-208ENST00000478423 BAALC-AS2P0C853 105 aa10.54□□□□□ -0.72
NPHP4-208ENST00000478423 SPAG11BQ08648 103 aa10.54□□□□□ -0.72
NPHP4-208ENST00000478423 CFAP126Q5VTH2 177 aa10.54□□□□□ -0.72
NPHP4-208ENST00000478423 HAMPP81172 84 aa10.54□□□□□ -0.72
NPHP4-208ENST00000478423 MIR7-3HGQ8N6C7 128 aa10.54□□□□□ -0.72
NPHP4-208ENST00000478423 ADAMTS20P59510 1910 aa10.53□□□□□ -0.72
NPHP4-208ENST00000478423 NEXN-AS1Q8NBZ9 246 aa10.53□□□□□ -0.72
NPHP4-208ENST00000478423 UBL5Q9BZL1 73 aa10.53□□□□□ -0.72
NPHP4-208ENST00000478423 CDKN2A-AS1Q9UH64 79 aa10.53□□□□□ -0.72
NPHP4-208ENST00000478423 U3KQK5 164 aa10.53□□□□□ -0.72
NPHP4-208ENST00000478423 USP24Q9UPU5 2620 aa10.53□□□□□ -0.72
NPHP4-208ENST00000478423 GAGE12HA6NDE8 117 aa10.52□□□□□ -0.72
NPHP4-208ENST00000478423 SMIM9A6NGZ8 99 aa10.52□□□□□ -0.72
NPHP4-208ENST00000478423 GAS8-AS1O95177 125 aa10.52□□□□□ -0.73
NPHP4-208ENST00000478423 EDN2P20800 178 aa10.52□□□□□ -0.73
NPHP4-208ENST00000478423 IGLV4-3A0A075B6K6 122 aa10.52□□□□□ -0.73
NPHP4-208ENST00000478423 SMR3AQ99954 134 aa10.52□□□□□ -0.73
NPHP4-208ENST00000478423 TRBV27A0A0K0K1C4 114 aa10.52□□□□□ -0.73
NPHP4-208ENST00000478423 UBE2BP63146 152 aa10.52□□□□□ -0.73
NPHP4-208ENST00000478423 NDUFA1O15239 70 aa10.51□□□□□ -0.73
NPHP4-208ENST00000478423 RPL18AQ02543 176 aaKnown RBP10.51□□□□□ -0.73
NPHP4-208ENST00000478423 BBC3Q96PG8 261 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms